RNA–Protein interactions for RNA: ENST00000494028.1

CLCN6-208, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5

Gene CLCN6, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-208ENST00000494028 CCNA2P20248 432 aa9.88□□□□□ -0.83
CLCN6-208ENST00000494028 GSTM3P21266 225 aa9.88□□□□□ -0.83
CLCN6-208ENST00000494028 FPR3P25089 353 aa9.88□□□□□ -0.83
CLCN6-208ENST00000494028 CD1CP29017 333 aa9.88□□□□□ -0.83
CLCN6-208ENST00000494028 SLC15A1P46059 708 aa9.88□□□□□ -0.83
CLCN6-208ENST00000494028 DHPSP49366 369 aaPredicted RBP9.88□□□□□ -0.83
CLCN6-208ENST00000494028 RNF144AP50876 292 aaPredicted RBP9.88□□□□□ -0.83
CLCN6-208ENST00000494028 HSD17B7P56937 341 aa9.88□□□□□ -0.83
CLCN6-208ENST00000494028 ZNF91Q05481 1191 aa9.88□□□□□ -0.83
CLCN6-208ENST00000494028 STX4Q12846 297 aa9.88□□□□□ -0.83
CLCN6-208ENST00000494028 COX10Q12887 443 aa9.88□□□□□ -0.83
CLCN6-208ENST00000494028 TSPAN31Q12999 210 aa9.88□□□□□ -0.83
CLCN6-208ENST00000494028 DYNC1I2Q13409 638 aaKnown RBP9.88□□□□□ -0.83
CLCN6-208ENST00000494028 DECR1Q16698 335 aa9.88□□□□□ -0.83
CLCN6-208ENST00000494028 ZNF730Q6ZMV8 503 aa9.88□□□□□ -0.83
CLCN6-208ENST00000494028 WDR88Q6ZMY6 472 aa9.88□□□□□ -0.83
CLCN6-208ENST00000494028 MAMSTRQ6ZN01 415 aa9.88□□□□□ -0.83
CLCN6-208ENST00000494028 MRGPREQ86SM8 312 aa9.88□□□□□ -0.83
CLCN6-208ENST00000494028 RANBP3LQ86VV4 465 aaPredicted RBP9.88□□□□□ -0.83
CLCN6-208ENST00000494028 D2HGDHQ8N465 521 aa9.88□□□□□ -0.83
CLCN6-208ENST00000494028 OR1L3Q8NH93 324 aa9.88□□□□□ -0.83
CLCN6-208ENST00000494028 GNPDA2Q8TDQ7 276 aa9.88□□□□□ -0.83
CLCN6-208ENST00000494028 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.88□□□□□ -0.83
CLCN6-208ENST00000494028 MYDGFQ969H8 173 aa9.88□□□□□ -0.83
CLCN6-208ENST00000494028 AHCYL2Q96HN2 611 aaKnown RBP9.88□□□□□ -0.83
CLCN6-208ENST00000494028 FAM46AQ96IP4 442 aaKnown RBP9.88□□□□□ -0.83
CLCN6-208ENST00000494028 BCL7BQ9BQE9 202 aa9.88□□□□□ -0.83
CLCN6-208ENST00000494028 PRSS27Q9BQR3 290 aa9.88□□□□□ -0.83
CLCN6-208ENST00000494028 NUDT22Q9BRQ3 303 aa9.88□□□□□ -0.83
CLCN6-208ENST00000494028 CNPPD1Q9BV87 410 aa9.88□□□□□ -0.83
CLCN6-208ENST00000494028 ITPAQ9BY32 194 aa9.88□□□□□ -0.83
CLCN6-208ENST00000494028 GPN2Q9H9Y4 310 aaPredicted RBP9.88□□□□□ -0.83
CLCN6-208ENST00000494028 CLN6Q9NWW5 311 aa9.88□□□□□ -0.83
CLCN6-208ENST00000494028 TAS2R16Q9NYV7 291 aa9.88□□□□□ -0.83
CLCN6-208ENST00000494028 CNOT2Q9NZN8 540 aaKnown RBP9.88□□□□□ -0.83
CLCN6-208ENST00000494028 CNIH4Q9P003 139 aa9.88□□□□□ -0.83
CLCN6-208ENST00000494028 GMEB2Q9UKD1 530 aa9.88□□□□□ -0.83
CLCN6-208ENST00000494028 ERVK-19Q9WJR5 959 aa9.88□□□□□ -0.83
CLCN6-208ENST00000494028 MMACHCQ9Y4U1 282 aa9.88□□□□□ -0.83
CLCN6-208ENST00000494028 RP1P56715 2156 aa9.88□□□□□ -0.83
CLCN6-208ENST00000494028 TRIOO75962 3097 aa9.88□□□□□ -0.83
CLCN6-208ENST00000494028 PI4KAP42356 2102 aa9.88□□□□□ -0.83
CLCN6-208ENST00000494028 NCOR1O75376 2440 aa9.87□□□□□ -0.83
CLCN6-208ENST00000494028 COL27A1Q8IZC6 1860 aaPredicted RBP9.87□□□□□ -0.83
CLCN6-208ENST00000494028 IGKV3D-11A0A0A0MRZ8 115 aa9.87□□□□□ -0.83
CLCN6-208ENST00000494028 LY6G6EA0A0G2JKS1 128 aa9.87□□□□□ -0.83
CLCN6-208ENST00000494028 TRAPPC13A5PLN9 417 aa9.87□□□□□ -0.83
CLCN6-208ENST00000494028 OR2W5A6NFC9 320 aa9.87□□□□□ -0.83
CLCN6-208ENST00000494028 EFCAB10A6NFE3 127 aa9.87□□□□□ -0.83
CLCN6-208ENST00000494028 NPIPB9F8W1W9 429 aa9.87□□□□□ -0.83
CLCN6-208ENST00000494028 CLDN4O14493 209 aa9.87□□□□□ -0.83
CLCN6-208ENST00000494028 PRKYO43930 277 aa9.87□□□□□ -0.83
CLCN6-208ENST00000494028 FMO6PO60774 539 aa9.87□□□□□ -0.83
CLCN6-208ENST00000494028 ENTPD6O75354 484 aa9.87□□□□□ -0.83
CLCN6-208ENST00000494028 OR2B3O76000 313 aa9.87□□□□□ -0.83
CLCN6-208ENST00000494028 PTHP01270 115 aa9.87□□□□□ -0.83
CLCN6-208ENST00000494028 STSP08842 583 aa9.87□□□□□ -0.83
CLCN6-208ENST00000494028 IFNA8P32881 189 aa9.87□□□□□ -0.83
CLCN6-208ENST00000494028 GALNSP34059 522 aa9.87□□□□□ -0.83
CLCN6-208ENST00000494028 IFNGR2P38484 337 aa9.87□□□□□ -0.83
CLCN6-208ENST00000494028 GPR4P46093 362 aa9.87□□□□□ -0.83
CLCN6-208ENST00000494028 PCYT1AP49585 367 aa9.87□□□□□ -0.83
CLCN6-208ENST00000494028 SEPHS1P49903 392 aa9.87□□□□□ -0.83
CLCN6-208ENST00000494028 EFNA3P52797 238 aa9.87□□□□□ -0.83
CLCN6-208ENST00000494028 FUT7Q11130 342 aa9.87□□□□□ -0.83
CLCN6-208ENST00000494028 SERTAD2Q14140 314 aa9.87□□□□□ -0.83
CLCN6-208ENST00000494028 ZNF267Q14586 743 aaPredicted RBP9.87□□□□□ -0.83
CLCN6-208ENST00000494028 SPCS2Q15005 226 aa9.87□□□□□ -0.83
CLCN6-208ENST00000494028 ZNHIT3Q15649 155 aaPredicted RBP9.87□□□□□ -0.83
CLCN6-208ENST00000494028 CTF1Q16619 201 aa9.87□□□□□ -0.83
CLCN6-208ENST00000494028 AMZ1Q400G9 498 aa9.87□□□□□ -0.83
CLCN6-208ENST00000494028 FLYWCH1Q4VC44 716 aa9.87□□□□□ -0.83
CLCN6-208ENST00000494028 MFSD4BQ5TF39 518 aa9.87□□□□□ -0.83
CLCN6-208ENST00000494028 AP1ARQ63HQ0 302 aa9.87□□□□□ -0.83
CLCN6-208ENST00000494028 ZC3H14Q6PJT7 736 aaKnown RBP9.87□□□□□ -0.83
CLCN6-208ENST00000494028 ZNF620Q6ZNG0 422 aa9.87□□□□□ -0.83
CLCN6-208ENST00000494028 RASSF6Q6ZTQ3 369 aa9.87□□□□□ -0.83
CLCN6-208ENST00000494028 PTCHD4Q6ZW05 846 aa9.87□□□□□ -0.83
CLCN6-208ENST00000494028 MBOAT2Q6ZWT7 520 aa9.87□□□□□ -0.83
CLCN6-208ENST00000494028 MED25Q71SY5 747 aa9.87□□□□□ -0.83
CLCN6-208ENST00000494028 ARHGAP22Q7Z5H3 698 aa9.87□□□□□ -0.83
CLCN6-208ENST00000494028 KMT5CQ86Y97 462 aa9.87□□□□□ -0.83
CLCN6-208ENST00000494028 PLXDC1Q8IUK5 500 aa9.87□□□□□ -0.83
CLCN6-208ENST00000494028 Q8N9G6 341 aaPredicted RBP9.87□□□□□ -0.83
CLCN6-208ENST00000494028 B3GNT7Q8NFL0 401 aa9.87□□□□□ -0.83
CLCN6-208ENST00000494028 TOR1AIP2Q8NFQ8 470 aa9.87□□□□□ -0.83
CLCN6-208ENST00000494028 OR51Q1Q8NH59 317 aa9.87□□□□□ -0.83
CLCN6-208ENST00000494028 C9orf43Q8TAL5 461 aaPredicted RBP9.87□□□□□ -0.83
CLCN6-208ENST00000494028 TEX47Q8TBZ9 253 aa9.87□□□□□ -0.83
CLCN6-208ENST00000494028 TMEM255BQ8WV15 326 aa9.87□□□□□ -0.83
CLCN6-208ENST00000494028 PMM1Q92871 262 aa9.87□□□□□ -0.83
CLCN6-208ENST00000494028 RIT1Q92963 219 aa9.87□□□□□ -0.83
CLCN6-208ENST00000494028 TSLPQ969D9 159 aa9.87□□□□□ -0.83
CLCN6-208ENST00000494028 MVB12AQ96EY5 273 aa9.87□□□□□ -0.83
CLCN6-208ENST00000494028 POLDIP3Q9BY77 421 aaKnown RBP9.87□□□□□ -0.83
CLCN6-208ENST00000494028 ALOXE3Q9BYJ1 711 aa9.87□□□□□ -0.83
CLCN6-208ENST00000494028 ZNF768Q9H5H4 540 aaKnown RBP9.87□□□□□ -0.83
CLCN6-208ENST00000494028 EGLN3Q9H6Z9 239 aa9.87□□□□□ -0.83
CLCN6-208ENST00000494028 EVA1AQ9H8M9 152 aa9.87□□□□□ -0.83
CLCN6-208ENST00000494028 AMBNQ9NP70 447 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms