RNA–Protein interactions for RNA: ENST00000492793.1

CLK1-213, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 596 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-213ENST00000492793 ZNF658Q5TYW1 1059 aaPredicted RBP3□□□□□ -1.93
CLK1-213ENST00000492793 SLC22A10Q63ZE4 541 aa3□□□□□ -1.93
CLK1-213ENST00000492793 SULT1C3Q6IMI6 304 aa3□□□□□ -1.93
CLK1-213ENST00000492793 NIPAL3Q6P499 406 aa3□□□□□ -1.93
CLK1-213ENST00000492793 BLOC1S2Q6QNY1 142 aa3□□□□□ -1.93
CLK1-213ENST00000492793 BAIAP2L2Q6UXY1 529 aa3□□□□□ -1.93
CLK1-213ENST00000492793 LANCL3Q6ZV70 420 aa3□□□□□ -1.93
CLK1-213ENST00000492793 LHFPL4Q7Z7J7 247 aa3□□□□□ -1.93
CLK1-213ENST00000492793 IFNEQ86WN2 208 aa3□□□□□ -1.93
CLK1-213ENST00000492793 SPAG16Q8N0X2 631 aa3□□□□□ -1.93
CLK1-213ENST00000492793 BPIFB2Q8N4F0 458 aa3□□□□□ -1.93
CLK1-213ENST00000492793 LINC00612Q8N6U2 182 aa3□□□□□ -1.93
CLK1-213ENST00000492793 CSNK1A1LQ8N752 337 aa3□□□□□ -1.93
CLK1-213ENST00000492793 ZBTB44Q8NCP5 570 aa3□□□□□ -1.93
CLK1-213ENST00000492793 OR2T33Q8NG76 320 aa3□□□□□ -1.93
CLK1-213ENST00000492793 TRUB1Q8WWH5 349 aaKnown RBP3□□□□□ -1.93
CLK1-213ENST00000492793 AKR1E2Q96JD6 320 aa3□□□□□ -1.93
CLK1-213ENST00000492793 TM2D1Q9BX74 207 aa3□□□□□ -1.93
CLK1-213ENST00000492793 POLR3FQ9H1D9 316 aaPredicted RBP3□□□□□ -1.93
CLK1-213ENST00000492793 OPN3Q9H1Y3 402 aaPredicted RBP3□□□□□ -1.93
CLK1-213ENST00000492793 WDR76Q9H967 626 aa3□□□□□ -1.93
CLK1-213ENST00000492793 LIN28AQ9H9Z2 209 aaKnown RBP3□□□□□ -1.93
CLK1-213ENST00000492793 ZNF275Q9NSD4 429 aaPredicted RBP3□□□□□ -1.93
CLK1-213ENST00000492793 MFHAS1Q9Y4C4 1052 aa3□□□□□ -1.93
CLK1-213ENST00000492793 GMPPBQ9Y5P6 360 aa3□□□□□ -1.93
CLK1-213ENST00000492793 ZNF646O15015 1829 aaPredicted RBP3□□□□□ -1.93
CLK1-213ENST00000492793 CROCCQ5TZA2 2017 aa3□□□□□ -1.93
CLK1-213ENST00000492793 CHD4Q14839 1912 aa2.99□□□□□ -1.93
CLK1-213ENST00000492793 COL2A1P02458 1487 aaPredicted RBP2.99□□□□□ -1.93
CLK1-213ENST00000492793 A0A1B0GUL7 405 aa2.99□□□□□ -1.93
CLK1-213ENST00000492793 SAGE2PA6NJ88 616 aa2.99□□□□□ -1.93
CLK1-213ENST00000492793 E9PLD3 99 aa2.99□□□□□ -1.93
CLK1-213ENST00000492793 K7EPI3 171 aa2.99□□□□□ -1.93
CLK1-213ENST00000492793 SLC17A2O00624 439 aa2.99□□□□□ -1.93
CLK1-213ENST00000492793 MAPK13O15264 365 aa2.99□□□□□ -1.93
CLK1-213ENST00000492793 DUX1O43812 170 aa2.99□□□□□ -1.93
CLK1-213ENST00000492793 NOL3O60936 208 aaKnown RBP2.99□□□□□ -1.93
CLK1-213ENST00000492793 SRSF10O75494 262 aaKnown RBP2.99□□□□□ -1.93
CLK1-213ENST00000492793 IGKV3-15P01624 115 aa2.99□□□□□ -1.93
CLK1-213ENST00000492793 HEXBP07686 556 aa2.99□□□□□ -1.93
CLK1-213ENST00000492793 EPB41P11171 864 aaKnown RBP2.99□□□□□ -1.93
CLK1-213ENST00000492793 IGFBP5P24593 272 aa2.99□□□□□ -1.93
CLK1-213ENST00000492793 ATP5A1P25705 553 aaKnown RBP2.99□□□□□ -1.93
CLK1-213ENST00000492793 HPDP32754 393 aaPredicted RBP2.99□□□□□ -1.93
CLK1-213ENST00000492793 OVGP1Q12889 678 aa2.99□□□□□ -1.93
CLK1-213ENST00000492793 KCNJ11Q14654 390 aa2.99□□□□□ -1.93
CLK1-213ENST00000492793 DCAF4L1Q3SXM0 396 aa2.99□□□□□ -1.93
CLK1-213ENST00000492793 GLYR1Q49A26 553 aaPredicted RBP2.99□□□□□ -1.93
CLK1-213ENST00000492793 PAN3Q58A45 887 aaKnown RBP2.99□□□□□ -1.93
CLK1-213ENST00000492793 TMEM41BQ5BJD5 291 aa2.99□□□□□ -1.93
CLK1-213ENST00000492793 ZNF57Q68EA5 555 aaPredicted RBP2.99□□□□□ -1.93
CLK1-213ENST00000492793 ASPHD2Q6ICH7 369 aa2.99□□□□□ -1.93
CLK1-213ENST00000492793 CYS1Q717R9 158 aa2.99□□□□□ -1.93
CLK1-213ENST00000492793 ZNF573Q86YE8 665 aa2.99□□□□□ -1.93
CLK1-213ENST00000492793 VPS39Q96JC1 886 aa2.99□□□□□ -1.93
CLK1-213ENST00000492793 MAPKAP1Q9BPZ7 522 aa2.99□□□□□ -1.93
CLK1-213ENST00000492793 TMEM121Q9BTD3 319 aa2.99□□□□□ -1.93
CLK1-213ENST00000492793 PALMDQ9NP74 551 aa2.99□□□□□ -1.93
CLK1-213ENST00000492793 PNO1Q9NRX1 252 aaKnown RBP2.99□□□□□ -1.93
CLK1-213ENST00000492793 FARSBQ9NSD9 589 aaKnown RBP2.99□□□□□ -1.93
CLK1-213ENST00000492793 AGPAT5Q9NUQ2 364 aa2.99□□□□□ -1.93
CLK1-213ENST00000492793 SDAD1Q9NVU7 687 aaKnown RBP eCLIP2.99□□□□□ -1.935e-6■□□□□ 10.5
CLK1-213ENST00000492793 CLEC4EQ9ULY5 219 aa2.99□□□□□ -1.93
CLK1-213ENST00000492793 PPIAL4AQ9Y536 164 aa2.99□□□□□ -1.93
CLK1-213ENST00000492793 NOTCH3Q9UM47 2321 aa2.99□□□□□ -1.93
CLK1-213ENST00000492793 A0A1W2PQ72 361 aa2.98□□□□□ -1.93
CLK1-213ENST00000492793 FRG2CA6NGY1 282 aa2.98□□□□□ -1.93
CLK1-213ENST00000492793 FCN1O00602 326 aa2.98□□□□□ -1.93
CLK1-213ENST00000492793 TNFSF11O14788 317 aa2.98□□□□□ -1.93
CLK1-213ENST00000492793 HAT1O14929 419 aa2.98□□□□□ -1.93
CLK1-213ENST00000492793 STX7O15400 261 aaKnown RBP2.98□□□□□ -1.93
CLK1-213ENST00000492793 TSC22D2O75157 780 aa2.98□□□□□ -1.93
CLK1-213ENST00000492793 TRIM3O75382 744 aaPredicted RBP2.98□□□□□ -1.93
CLK1-213ENST00000492793 GUCA1CO95843 209 aa2.98□□□□□ -1.93
CLK1-213ENST00000492793 TSPY4P0CV99 314 aa2.98□□□□□ -1.93
CLK1-213ENST00000492793 TSPY10P0CW01 314 aa2.98□□□□□ -1.93
CLK1-213ENST00000492793 KRT13P13646 458 aa2.98□□□□□ -1.93
CLK1-213ENST00000492793 IGHV1-2P23083 117 aa2.98□□□□□ -1.93
CLK1-213ENST00000492793 MDH1P40925 334 aaKnown RBP2.98□□□□□ -1.93
CLK1-213ENST00000492793 PAGE2BQ5JRK9 111 aa2.98□□□□□ -1.93
CLK1-213ENST00000492793 OLFML2AQ68BL7 652 aa2.98□□□□□ -1.93
CLK1-213ENST00000492793 CGB2Q6NT52 195 aa2.98□□□□□ -1.93
CLK1-213ENST00000492793 TMEM184AQ6ZMB5 413 aa2.98□□□□□ -1.93
CLK1-213ENST00000492793 Q6ZR54 194 aa2.98□□□□□ -1.93
CLK1-213ENST00000492793 DPY19L4Q7Z388 723 aa2.98□□□□□ -1.93
CLK1-213ENST00000492793 ADAMTS16Q8TE57 1224 aa2.98□□□□□ -1.93
CLK1-213ENST00000492793 TPPP3Q9BW30 176 aa2.98□□□□□ -1.93
CLK1-213ENST00000492793 DEFB126Q9BYW3 111 aa2.98□□□□□ -1.93
CLK1-213ENST00000492793 CRNKL1Q9BZJ0 848 aaKnown RBP2.98□□□□□ -1.93
CLK1-213ENST00000492793 RHOJQ9H4E5 214 aa2.98□□□□□ -1.93
CLK1-213ENST00000492793 COG4Q9H9E3 785 aa2.98□□□□□ -1.93
CLK1-213ENST00000492793 SLC35D1Q9NTN3 355 aa2.98□□□□□ -1.93
CLK1-213ENST00000492793 EHFQ9NZC4 300 aa2.98□□□□□ -1.93
CLK1-213ENST00000492793 GALPQ9UBC7 116 aa2.98□□□□□ -1.93
CLK1-213ENST00000492793 SH3BGRL2Q9UJC5 107 aa2.98□□□□□ -1.93
CLK1-213ENST00000492793 RNF6Q9Y252 685 aa2.98□□□□□ -1.93
CLK1-213ENST00000492793 IGHV3-35A0A0C4DH35 117 aa2.97□□□□□ -1.93
CLK1-213ENST00000492793 FAM168BA1KXE4 195 aa2.97□□□□□ -1.93
CLK1-213ENST00000492793 OR6C65A6NJZ3 312 aa2.97□□□□□ -1.93
CLK1-213ENST00000492793 RAMP1O60894 148 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms