RNA–Protein interactions for RNA: ENST00000492602.5

SEC13-219, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, human

TSL 3

Gene SEC13, Length 393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEC13-219	ENST00000492602	TREM2	Q9NZC2	230 aa		4.7	□□□□□ -1.66
SEC13-219	ENST00000492602	EHD3	Q9NZN3	535 aa		4.7	□□□□□ -1.66
SEC13-219	ENST00000492602	MCTS1	Q9ULC4	181 aa	Known RBP	4.7	□□□□□ -1.66
SEC13-219	ENST00000492602		A0A0G2JMP0	313 aa		4.69	□□□□□ -1.66
SEC13-219	ENST00000492602		A0A0X1KG70	313 aa		4.69	□□□□□ -1.66
SEC13-219	ENST00000492602	LCE6A	A0A183	80 aa		4.69	□□□□□ -1.66
SEC13-219	ENST00000492602	OR2M5	A3KFT3	312 aa		4.69	□□□□□ -1.66
SEC13-219	ENST00000492602	LRIT2	A6NDA9	550 aa		4.69	□□□□□ -1.66
SEC13-219	ENST00000492602	LYNX1	G3V0Z9	82 aa		4.69	□□□□□ -1.66
SEC13-219	ENST00000492602	UGT2B11	O75310	529 aa		4.69	□□□□□ -1.66
SEC13-219	ENST00000492602	SYNGR4	O95473	234 aa		4.69	□□□□□ -1.66
SEC13-219	ENST00000492602	AIFM1	O95831	613 aa		4.69	□□□□□ -1.66
SEC13-219	ENST00000492602	GUCA1C	O95843	209 aa		4.69	□□□□□ -1.66
SEC13-219	ENST00000492602	CLPS	P04118	112 aa		4.69	□□□□□ -1.66
SEC13-219	ENST00000492602	CSF1	P09603	554 aa		4.69	□□□□□ -1.66
SEC13-219	ENST00000492602	LYNX1	P0DP58	116 aa		4.69	□□□□□ -1.66
SEC13-219	ENST00000492602	ALOX15	P16050	662 aa	Predicted RBP	4.69	□□□□□ -1.66
SEC13-219	ENST00000492602	SELE	P16581	610 aa		4.69	□□□□□ -1.66
SEC13-219	ENST00000492602	GGT1	P19440	569 aa		4.69	□□□□□ -1.66
SEC13-219	ENST00000492602	CPN2	P22792	545 aa		4.69	□□□□□ -1.66
SEC13-219	ENST00000492602	SSTR4	P31391	388 aa		4.69	□□□□□ -1.66
SEC13-219	ENST00000492602	SLC1A2	P43004	574 aa		4.69	□□□□□ -1.66
SEC13-219	ENST00000492602	IDH3G	P51553	393 aa	Predicted RBP	4.69	□□□□□ -1.66
SEC13-219	ENST00000492602	RAG2	P55895	527 aa		4.69	□□□□□ -1.66
SEC13-219	ENST00000492602	DSCR4	P56555	118 aa	Predicted RBP	4.69	□□□□□ -1.66
SEC13-219	ENST00000492602	PHEX	P78562	749 aa		4.69	□□□□□ -1.66
SEC13-219	ENST00000492602	IGLV3-21	P80748	117 aa	Predicted RBP	4.69	□□□□□ -1.66
SEC13-219	ENST00000492602	DR1	Q01658	176 aa		4.69	□□□□□ -1.66
SEC13-219	ENST00000492602	CHRNE	Q04844	493 aa		4.69	□□□□□ -1.66
SEC13-219	ENST00000492602	SLC9A3R2	Q15599	337 aa		4.69	□□□□□ -1.66
SEC13-219	ENST00000492602	SPRED3	Q2MJR0	410 aa		4.69	□□□□□ -1.66
SEC13-219	ENST00000492602	C2orf68	Q2NKX9	166 aa		4.69	□□□□□ -1.66
SEC13-219	ENST00000492602	PAGE2B	Q5JRK9	111 aa		4.69	□□□□□ -1.66
SEC13-219	ENST00000492602	TMEM201	Q5SNT2	666 aa		4.69	□□□□□ -1.66
SEC13-219	ENST00000492602	ZNF362	Q5T0B9	420 aa	Predicted RBP	4.69	□□□□□ -1.66
SEC13-219	ENST00000492602	RBM20	Q5T481	1227 aa	Known RBP	4.69	□□□□□ -1.66
SEC13-219	ENST00000492602	SAXO2	Q658L1	398 aa		4.69	□□□□□ -1.66
SEC13-219	ENST00000492602	GTF2IRD2B	Q6EKJ0	949 aa		4.69	□□□□□ -1.66
SEC13-219	ENST00000492602	ADNP2	Q6IQ32	1131 aa		4.69	□□□□□ -1.66
SEC13-219	ENST00000492602	FAM45BP	Q6NSW5	357 aa		4.69	□□□□□ -1.66
SEC13-219	ENST00000492602	TTC27	Q6P3X3	843 aa		4.69	□□□□□ -1.66
SEC13-219	ENST00000492602	C16orf87	Q6PH81	154 aa		4.69	□□□□□ -1.66
SEC13-219	ENST00000492602	PAQR3	Q6TCH7	311 aa		4.69	□□□□□ -1.66
SEC13-219	ENST00000492602	CYHR1	Q6ZMK1	362 aa		4.69	□□□□□ -1.66
SEC13-219	ENST00000492602	SSX8	Q7RTT4	187 aa		4.69	□□□□□ -1.66
SEC13-219	ENST00000492602	NUFIP2	Q7Z417	695 aa	Known RBP	4.69	□□□□□ -1.66
SEC13-219	ENST00000492602	GALNT7	Q86SF2	657 aa		4.69	□□□□□ -1.66
SEC13-219	ENST00000492602	TMPRSS11B	Q86T26	416 aa		4.69	□□□□□ -1.66
SEC13-219	ENST00000492602	GTF2IRD2	Q86UP8	949 aa		4.69	□□□□□ -1.66
SEC13-219	ENST00000492602	ST13P4	Q8IZP2	240 aa	Predicted RBP	4.69	□□□□□ -1.66
SEC13-219	ENST00000492602	ZNF786	Q8N393	782 aa		4.69	□□□□□ -1.66
SEC13-219	ENST00000492602	C2CD4A	Q8NCU7	369 aa	Predicted RBP	4.69	□□□□□ -1.66
SEC13-219	ENST00000492602	OR2L5	Q8NG80	312 aa		4.69	□□□□□ -1.66
SEC13-219	ENST00000492602	OR4M2	Q8NGB6	313 aa		4.69	□□□□□ -1.66
SEC13-219	ENST00000492602	OR4K17	Q8NGC6	315 aa		4.69	□□□□□ -1.66
SEC13-219	ENST00000492602	OR52B6	Q8NGF0	335 aa		4.69	□□□□□ -1.66
SEC13-219	ENST00000492602	OR4F5	Q8NH21	305 aa		4.69	□□□□□ -1.66
SEC13-219	ENST00000492602	OR52N5	Q8NH56	324 aa		4.69	□□□□□ -1.66
SEC13-219	ENST00000492602	FAM45A	Q8TCE6	357 aa		4.69	□□□□□ -1.66
SEC13-219	ENST00000492602	CD200R1	Q8TD46	325 aa		4.69	□□□□□ -1.66
SEC13-219	ENST00000492602	PYROXD1	Q8WU10	500 aa		4.69	□□□□□ -1.66
SEC13-219	ENST00000492602	DVL3	Q92997	716 aa	Predicted RBP	4.69	□□□□□ -1.66
SEC13-219	ENST00000492602	PPP1R14A	Q96A00	147 aa		4.69	□□□□□ -1.66
SEC13-219	ENST00000492602	ADIPOR1	Q96A54	375 aa		4.69	□□□□□ -1.66
SEC13-219	ENST00000492602	OMA1	Q96E52	524 aa		4.69	□□□□□ -1.66
SEC13-219	ENST00000492602	LINGO1	Q96FE5	620 aa		4.69	□□□□□ -1.66
SEC13-219	ENST00000492602	PDLIM5	Q96HC4	596 aa	Known RBP	4.69	□□□□□ -1.66
SEC13-219	ENST00000492602	OSBPL9	Q96SU4	736 aa		4.69	□□□□□ -1.66
SEC13-219	ENST00000492602	GPA33	Q99795	319 aa		4.69	□□□□□ -1.66
SEC13-219	ENST00000492602	MAPKAP1	Q9BPZ7	522 aa		4.69	□□□□□ -1.66
SEC13-219	ENST00000492602	C1QTNF6	Q9BXI9	259 aa		4.69	□□□□□ -1.66
SEC13-219	ENST00000492602	REXO4	Q9GZR2	422 aa	Known RBP	4.69	□□□□□ -1.66
SEC13-219	ENST00000492602	TSPYL1	Q9H0U9	437 aa		4.69	□□□□□ -1.66
SEC13-219	ENST00000492602	FKRP	Q9H9S5	495 aa		4.69	□□□□□ -1.66
SEC13-219	ENST00000492602	TCF7L1	Q9HCS4	588 aa		4.69	□□□□□ -1.66
SEC13-219	ENST00000492602	CTNNAL1	Q9UBT7	734 aa		4.69	□□□□□ -1.66
SEC13-219	ENST00000492602	PDE10A	Q9Y233	779 aa		4.69	□□□□□ -1.66
SEC13-219	ENST00000492602	UTP11	Q9Y3A2	253 aa	Known RBP	4.69	□□□□□ -1.66
SEC13-219	ENST00000492602	SAR1B	Q9Y6B6	198 aa		4.69	□□□□□ -1.66
SEC13-219	ENST00000492602	DNAH3	Q8TD57	4116 aa		4.69	□□□□□ -1.66
SEC13-219	ENST00000492602	ZCWPW2	A0A1B0GU75	182 aa		4.68	□□□□□ -1.66
SEC13-219	ENST00000492602		A0A1W2PR80	420 aa		4.68	□□□□□ -1.66
SEC13-219	ENST00000492602	CLPSL1	A2RUU4	121 aa		4.68	□□□□□ -1.66
SEC13-219	ENST00000492602	C5orf63	A6NC05	138 aa		4.68	□□□□□ -1.66
SEC13-219	ENST00000492602	OR5H1	A6NKK0	313 aa		4.68	□□□□□ -1.66
SEC13-219	ENST00000492602	C17orf51	A8MQB3	221 aa		4.68	□□□□□ -1.66
SEC13-219	ENST00000492602	SYCE1L	A8MT33	242 aa		4.68	□□□□□ -1.66
SEC13-219	ENST00000492602		B4DXG7	233 aa		4.68	□□□□□ -1.66
SEC13-219	ENST00000492602	ZNF814	B7Z6K7	855 aa		4.68	□□□□□ -1.66
SEC13-219	ENST00000492602	CLDN34	H7C241	214 aa		4.68	□□□□□ -1.66
SEC13-219	ENST00000492602	CCDC188	H7C350	402 aa		4.68	□□□□□ -1.66
SEC13-219	ENST00000492602	DHH	O43323	396 aa		4.68	□□□□□ -1.66
SEC13-219	ENST00000492602	CXCL13	O43927	109 aa		4.68	□□□□□ -1.66
SEC13-219	ENST00000492602	PIP5K1C	O60331	668 aa		4.68	□□□□□ -1.66
SEC13-219	ENST00000492602	PRKRA	O75569	313 aa	Known RBP	4.68	□□□□□ -1.66
SEC13-219	ENST00000492602	CLEC3A	O75596	197 aa		4.68	□□□□□ -1.66
SEC13-219	ENST00000492602	SEC14L2	O76054	403 aa		4.68	□□□□□ -1.66
SEC13-219	ENST00000492602	NGF	P01138	241 aa		4.68	□□□□□ -1.66
SEC13-219	ENST00000492602	AHSG	P02765	367 aa		4.68	□□□□□ -1.66
SEC13-219	ENST00000492602	TF	P02787	698 aa		4.68	□□□□□ -1.66

Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms