RNA–Protein interactions for RNA: ENST00000491028.1

MCF2L-230, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-230ENST00000491028 ELOAQ14241 798 aaKnown RBP17.12■□□□□ 0.33
MCF2L-230ENST00000491028 ZNF141Q15928 474 aa17.12■□□□□ 0.33
MCF2L-230ENST00000491028 MTX3Q5HYI7 312 aa17.12■□□□□ 0.33
MCF2L-230ENST00000491028 LCN8Q6JVE9 175 aa17.12■□□□□ 0.33
MCF2L-230ENST00000491028 IGFL2Q6UWQ7 119 aa17.12■□□□□ 0.33
MCF2L-230ENST00000491028 IL20RBQ6UXL0 311 aa17.12■□□□□ 0.33
MCF2L-230ENST00000491028 RTL4Q6ZR62 310 aa17.12■□□□□ 0.33
MCF2L-230ENST00000491028 LINC00696Q6ZRV3 163 aa17.12■□□□□ 0.33
MCF2L-230ENST00000491028 CYP4Z2PQ8N1L4 340 aa17.12■□□□□ 0.33
MCF2L-230ENST00000491028 GOLM1Q8NBJ4 401 aa17.12■□□□□ 0.33
MCF2L-230ENST00000491028 RASSF5Q8WWW0 418 aa17.12■□□□□ 0.33
MCF2L-230ENST00000491028 FAM162AQ96A26 154 aa17.12■□□□□ 0.33
MCF2L-230ENST00000491028 SGCZQ96LD1 299 aa17.12■□□□□ 0.33
MCF2L-230ENST00000491028 NSMCE2Q96MF7 247 aa17.12■□□□□ 0.33
MCF2L-230ENST00000491028 RNF145Q96MT1 663 aa17.12■□□□□ 0.33
MCF2L-230ENST00000491028 SMAD5Q99717 465 aaKnown RBP17.12■□□□□ 0.33
MCF2L-230ENST00000491028 UTP23Q9BRU9 249 aaKnown RBP17.12■□□□□ 0.33
MCF2L-230ENST00000491028 TRIM15Q9C019 465 aa17.12■□□□□ 0.33
MCF2L-230ENST00000491028 A0A1W2PQD3 144 aa17.11■□□□□ 0.33
MCF2L-230ENST00000491028 SCDO00767 359 aa17.11■□□□□ 0.33
MCF2L-230ENST00000491028 ACOT8O14734 319 aa17.11■□□□□ 0.33
MCF2L-230ENST00000491028 ICOSLGO75144 302 aa17.11■□□□□ 0.33
MCF2L-230ENST00000491028 UGT2B17O75795 530 aa17.11■□□□□ 0.33
MCF2L-230ENST00000491028 OXSR1O95747 527 aaPredicted RBP17.11■□□□□ 0.33
MCF2L-230ENST00000491028 TBXA2RP21731 343 aa17.11■□□□□ 0.33
MCF2L-230ENST00000491028 TBR1Q16650 682 aa17.11■□□□□ 0.33
MCF2L-230ENST00000491028 GRAMD1BQ3KR37 738 aa17.11■□□□□ 0.33
MCF2L-230ENST00000491028 LIN52Q52LA3 116 aa17.11■□□□□ 0.33
MCF2L-230ENST00000491028 LRRC23Q53EV4 343 aaPredicted RBP17.11■□□□□ 0.33
MCF2L-230ENST00000491028 TMEM81Q6P7N7 255 aa17.11■□□□□ 0.33
MCF2L-230ENST00000491028 DHFR2Q86XF0 187 aa17.11■□□□□ 0.33
MCF2L-230ENST00000491028 EID3Q8N140 333 aa17.11■□□□□ 0.33
MCF2L-230ENST00000491028 FAM13CQ8NE31 585 aa17.11■□□□□ 0.33
MCF2L-230ENST00000491028 BHLHE22Q8NFJ8 381 aaPredicted RBP17.11■□□□□ 0.33
MCF2L-230ENST00000491028 OR10G3Q8NGC4 313 aa17.11■□□□□ 0.33
MCF2L-230ENST00000491028 SLC26A7Q8TE54 656 aa17.11■□□□□ 0.33
MCF2L-230ENST00000491028 RNF138Q8WVD3 245 aa17.11■□□□□ 0.33
MCF2L-230ENST00000491028 POP5Q969H6 163 aaKnown RBP17.11■□□□□ 0.33
MCF2L-230ENST00000491028 PCDHGB7Q9Y5F8 929 aa17.11■□□□□ 0.33
MCF2L-230ENST00000491028 CACNA1BQ00975 2339 aa17.11■□□□□ 0.33
MCF2L-230ENST00000491028 NPIPA5A0A0B4J1W7 369 aa17.1■□□□□ 0.33
MCF2L-230ENST00000491028 OR5H15A6NDH6 313 aa17.1■□□□□ 0.33
MCF2L-230ENST00000491028 NPIPA7E9PJI5 369 aa17.1■□□□□ 0.33
MCF2L-230ENST00000491028 MKRN2OSH3BPM6 223 aa17.1■□□□□ 0.33
MCF2L-230ENST00000491028 M0QX08 132 aa17.1■□□□□ 0.33
MCF2L-230ENST00000491028 MFN2O95140 757 aa17.1■□□□□ 0.33
MCF2L-230ENST00000491028 WDPCPO95876 746 aa17.1■□□□□ 0.33
MCF2L-230ENST00000491028 PABPC4LP0CB38 370 aaKnown RBP17.1■□□□□ 0.33
MCF2L-230ENST00000491028 NPIPA8P0DM63 369 aa17.1■□□□□ 0.33
MCF2L-230ENST00000491028 HPGDP15428 266 aa17.1■□□□□ 0.33
MCF2L-230ENST00000491028 CLK3P49761 638 aaKnown RBP17.1■□□□□ 0.33
MCF2L-230ENST00000491028 MS4A2Q01362 244 aa17.1■□□□□ 0.33
MCF2L-230ENST00000491028 OC90Q02509 493 aaPredicted RBP17.1■□□□□ 0.33
MCF2L-230ENST00000491028 TUBA3CQ13748 450 aa17.1■□□□□ 0.33
MCF2L-230ENST00000491028 FLOT2Q14254 428 aa17.1■□□□□ 0.33
MCF2L-230ENST00000491028 LARS2Q15031 903 aaKnown RBP17.1■□□□□ 0.33
MCF2L-230ENST00000491028 ZSWIM7Q19AV6 140 aa17.1■□□□□ 0.33
MCF2L-230ENST00000491028 ZNF468Q5VIY5 522 aaPredicted RBP17.1■□□□□ 0.33
MCF2L-230ENST00000491028 TUBA3EQ6PEY2 450 aa17.1■□□□□ 0.33
MCF2L-230ENST00000491028 ARMC8Q8IUR7 673 aa17.1■□□□□ 0.33
MCF2L-230ENST00000491028 OR4C3Q8NH37 302 aa17.1■□□□□ 0.33
MCF2L-230ENST00000491028 OR52P1PQ8NH57 321 aa17.1■□□□□ 0.33
MCF2L-230ENST00000491028 PAQR8Q8TEZ7 354 aa17.1■□□□□ 0.33
MCF2L-230ENST00000491028 WDR60Q8WVS4 1066 aa17.1■□□□□ 0.33
MCF2L-230ENST00000491028 TM9SF4Q92544 642 aa17.1■□□□□ 0.33
MCF2L-230ENST00000491028 HAS2Q92819 552 aa17.1■□□□□ 0.33
MCF2L-230ENST00000491028 QRSL1Q9H0R6 528 aaKnown RBP17.1■□□□□ 0.33
MCF2L-230ENST00000491028 SH2D2AQ9NP31 389 aa17.1■□□□□ 0.33
MCF2L-230ENST00000491028 ADPRHL2Q9NX46 363 aa17.1■□□□□ 0.33
MCF2L-230ENST00000491028 CNIH4Q9P003 139 aa17.1■□□□□ 0.33
MCF2L-230ENST00000491028 LRFN1Q9P244 771 aa17.1■□□□□ 0.33
MCF2L-230ENST00000491028 SEC14L3Q9UDX4 400 aa17.1■□□□□ 0.33
MCF2L-230ENST00000491028 KCNE5Q9UJ90 142 aa17.1■□□□□ 0.33
MCF2L-230ENST00000491028 RPS6KA6Q9UK32 745 aa17.1■□□□□ 0.33
MCF2L-230ENST00000491028 ZMIZ1Q9ULJ6 1067 aa17.1■□□□□ 0.33
MCF2L-230ENST00000491028 ZNF232Q9UNY5 417 aa17.1■□□□□ 0.33
MCF2L-230ENST00000491028 DTNAQ9Y4J8 743 aa17.1■□□□□ 0.33
MCF2L-230ENST00000491028 CHCHD2Q9Y6H1 151 aaPredicted RBP17.1■□□□□ 0.33
MCF2L-230ENST00000491028 TPRP12270 2363 aaKnown RBP17.09■□□□□ 0.33
MCF2L-230ENST00000491028 DMXL2Q8TDJ6 3036 aa17.09■□□□□ 0.33
MCF2L-230ENST00000491028 PRAMEF25A6NGN4 478 aa17.09■□□□□ 0.33
MCF2L-230ENST00000491028 ALG1L2C9J202 215 aa17.09■□□□□ 0.33
MCF2L-230ENST00000491028 FADS1O60427 444 aa17.09■□□□□ 0.33
MCF2L-230ENST00000491028 NID1P14543 1247 aa17.09■□□□□ 0.33
MCF2L-230ENST00000491028 IL7RP16871 459 aa17.09■□□□□ 0.33
MCF2L-230ENST00000491028 ENDOUP21128 410 aaKnown RBP17.09■□□□□ 0.33
MCF2L-230ENST00000491028 ATP6V1B2P21281 511 aa17.09■□□□□ 0.33
MCF2L-230ENST00000491028 PRKAR1BP31321 381 aa17.09■□□□□ 0.33
MCF2L-230ENST00000491028 EVI2BP34910 448 aa17.09■□□□□ 0.33
MCF2L-230ENST00000491028 CD96P40200 585 aa17.09■□□□□ 0.33
MCF2L-230ENST00000491028 CRYBA2P53672 197 aa17.09■□□□□ 0.33
MCF2L-230ENST00000491028 SNTA1Q13424 505 aa17.09■□□□□ 0.33
MCF2L-230ENST00000491028 KLHL26Q53HC5 615 aa17.09■□□□□ 0.33
MCF2L-230ENST00000491028 ZNF311Q5JNZ3 666 aa17.09■□□□□ 0.33
MCF2L-230ENST00000491028 PDZK1Q5T2W1 519 aa17.09■□□□□ 0.33
MCF2L-230ENST00000491028 C1orf146Q5VVC0 180 aa17.09■□□□□ 0.33
MCF2L-230ENST00000491028 DESI1Q6ICB0 168 aa17.09■□□□□ 0.33
MCF2L-230ENST00000491028 DHRS4L2Q6PKH6 230 aa17.09■□□□□ 0.33
MCF2L-230ENST00000491028 CBLL1Q75N03 491 aa17.09■□□□□ 0.33
MCF2L-230ENST00000491028 CMIPQ8IY22 773 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms