RNA–Protein interactions for RNA: ENST00000490751.1

LDB1-204, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-204ENST00000490751 BIRC5O15392 142 aa28.38■■■□□ 2.13
LDB1-204ENST00000490751 ANGPTL1O95841 491 aa28.38■■■□□ 2.13
LDB1-204ENST00000490751 IL18BPO95998 194 aa28.38■■■□□ 2.13
LDB1-204ENST00000490751 ALOX5P09917 674 aa28.38■■■□□ 2.13
LDB1-204ENST00000490751 ZCCHC12Q6PEW1 402 aa28.38■■■□□ 2.13
LDB1-204ENST00000490751 FIGNL1Q6PIW4 674 aa28.38■■■□□ 2.13
LDB1-204ENST00000490751 CDH24Q86UP0 819 aa28.38■■■□□ 2.13
LDB1-204ENST00000490751 KRTCAP2Q8N6L1 136 aa28.38■■■□□ 2.13
LDB1-204ENST00000490751 ZNF781Q8N8C0 355 aa28.38■■■□□ 2.13
LDB1-204ENST00000490751 NUDT8Q8WV74 236 aa28.38■■■□□ 2.13
LDB1-204ENST00000490751 WNT2BQ93097 391 aa28.38■■■□□ 2.13
LDB1-204ENST00000490751 ATAD3AQ9NVI7 634 aa28.38■■■□□ 2.13
LDB1-204ENST00000490751 EEF1E1-BLOC1S5C9J1V9 151 aa28.37■■■□□ 2.13
LDB1-204ENST00000490751 EEF1E1O43324 174 aaKnown RBP28.37■■■□□ 2.13
LDB1-204ENST00000490751 KCNK2O95069 426 aa28.37■■■□□ 2.13
LDB1-204ENST00000490751 ZWINTO95229 277 aa28.37■■■□□ 2.13
LDB1-204ENST00000490751 PEPDP12955 493 aa28.37■■■□□ 2.13
LDB1-204ENST00000490751 PEX19P40855 299 aa28.37■■■□□ 2.13
LDB1-204ENST00000490751 KIR2DL3P43628 341 aa28.37■■■□□ 2.13
LDB1-204ENST00000490751 PRIM2P49643 509 aa28.37■■■□□ 2.13
LDB1-204ENST00000490751 ABCE1P61221 599 aaKnown RBP28.37■■■□□ 2.13
LDB1-204ENST00000490751 C17orf67Q0P5P2 114 aa28.37■■■□□ 2.13
LDB1-204ENST00000490751 FOXF2Q12947 444 aa28.37■■■□□ 2.13
LDB1-204ENST00000490751 PDCD2Q16342 344 aaPredicted RBP28.37■■■□□ 2.13
LDB1-204ENST00000490751 BCL2A1Q16548 175 aa28.37■■■□□ 2.13
LDB1-204ENST00000490751 EXOSC6Q5RKV6 272 aaKnown RBP28.37■■■□□ 2.13
LDB1-204ENST00000490751 ZZZ3Q8IYH5 903 aa28.37■■■□□ 2.13
LDB1-204ENST00000490751 COX18Q8N8Q8 333 aa28.37■■■□□ 2.13
LDB1-204ENST00000490751 JADE3Q92613 823 aa28.37■■■□□ 2.13
LDB1-204ENST00000490751 C1GALT1C1Q96EU7 318 aa28.37■■■□□ 2.13
LDB1-204ENST00000490751 ZFP3Q96NJ6 502 aa28.37■■■□□ 2.13
LDB1-204ENST00000490751 FOXD3Q9UJU5 478 aaPredicted RBP28.37■■■□□ 2.13
LDB1-204ENST00000490751 ITGB1BP2Q9UKP3 347 aa28.37■■■□□ 2.13
LDB1-204ENST00000490751 EIF3LQ9Y262 564 aaKnown RBP28.37■■■□□ 2.13
LDB1-204ENST00000490751 SNX8Q9Y5X2 465 aa28.37■■■□□ 2.13
LDB1-204ENST00000490751 MED12LQ86YW9 2145 aa28.37■■■□□ 2.13
LDB1-204ENST00000490751 RCBTB2O95199 551 aa28.36■■■□□ 2.13
LDB1-204ENST00000490751 DHRS4L1P0CG22 281 aa28.36■■■□□ 2.13
LDB1-204ENST00000490751 POU3F2P20265 443 aaPredicted RBP28.36■■■□□ 2.13
LDB1-204ENST00000490751 PRPS1L1P21108 318 aa28.36■■■□□ 2.13
LDB1-204ENST00000490751 CPEB4Q17RY0 729 aaKnown RBP eCLIP28.36■■■□□ 2.13
LDB1-204ENST00000490751 TNFAIP8L3Q5GJ75 292 aa28.36■■■□□ 2.13
LDB1-204ENST00000490751 ZAR1Q86SH2 424 aa28.36■■■□□ 2.13
LDB1-204ENST00000490751 GRAMD2AQ8IUY3 354 aa28.36■■■□□ 2.13
LDB1-204ENST00000490751 UBQLNLQ8IYU4 475 aa28.36■■■□□ 2.13
LDB1-204ENST00000490751 FAM110BQ8TC76 370 aa28.36■■■□□ 2.13
LDB1-204ENST00000490751 OR5P2Q8WZ92 322 aa28.36■■■□□ 2.13
LDB1-204ENST00000490751 PPP1R36Q96LQ0 422 aa28.36■■■□□ 2.13
LDB1-204ENST00000490751 IGLV3-32A0A0A0MS00 114 aa28.35■■■□□ 2.13
LDB1-204ENST00000490751 HCRTR2O43614 444 aa28.35■■■□□ 2.13
LDB1-204ENST00000490751 GMFGO60234 142 aa28.35■■■□□ 2.13
LDB1-204ENST00000490751 OXSR1O95747 527 aaPredicted RBP28.35■■■□□ 2.13
LDB1-204ENST00000490751 HMGN2P05204 90 aaKnown RBP28.35■■■□□ 2.13
LDB1-204ENST00000490751 G6PDP11413 515 aa28.35■■■□□ 2.13
LDB1-204ENST00000490751 DIO3P55073 304 aa28.35■■■□□ 2.13
LDB1-204ENST00000490751 MAD2L1Q13257 205 aaPredicted RBP28.35■■■□□ 2.13
LDB1-204ENST00000490751 LASP1Q14847 261 aaKnown RBP28.35■■■□□ 2.13
LDB1-204ENST00000490751 RIMKLAQ8IXN7 391 aa28.35■■■□□ 2.13
LDB1-204ENST00000490751 NATD1Q8N6N6 113 aa28.35■■■□□ 2.13
LDB1-204ENST00000490751 OR5M1Q8NGP8 315 aa28.35■■■□□ 2.13
LDB1-204ENST00000490751 OR4C3Q8NH37 302 aa28.35■■■□□ 2.13
LDB1-204ENST00000490751 INTS12Q96CB8 462 aaKnown RBP28.35■■■□□ 2.13
LDB1-204ENST00000490751 COQ8BQ96D53 544 aa28.35■■■□□ 2.13
LDB1-204ENST00000490751 CHMP6Q96FZ7 201 aa28.35■■■□□ 2.13
LDB1-204ENST00000490751 PRPF18Q99633 342 aaKnown RBP28.35■■■□□ 2.13
LDB1-204ENST00000490751 SFXN3Q9BWM7 321 aa28.35■■■□□ 2.13
LDB1-204ENST00000490751 KCNK9Q9NPC2 374 aa28.35■■■□□ 2.13
LDB1-204ENST00000490751 FBXO34Q9NWN3 711 aa28.35■■■□□ 2.13
LDB1-204ENST00000490751 CRIM1Q9NZV1 1036 aa28.35■■■□□ 2.13
LDB1-204ENST00000490751 ANKRD17O75179 2603 aaKnown RBP28.35■■■□□ 2.13
LDB1-204ENST00000490751 OR2M5A3KFT3 312 aa28.34■■■□□ 2.13
LDB1-204ENST00000490751 ALG1L2C9J202 215 aa28.34■■■□□ 2.13
LDB1-204ENST00000490751 C6orf47O95873 294 aa28.34■■■□□ 2.13
LDB1-204ENST00000490751 TUBBP07437 444 aa28.34■■■□□ 2.13
LDB1-204ENST00000490751 NGFRP08138 427 aa28.34■■■□□ 2.13
LDB1-204ENST00000490751 EMX2Q04743 252 aa28.34■■■□□ 2.13
LDB1-204ENST00000490751 MPP2Q14168 576 aa28.34■■■□□ 2.13
LDB1-204ENST00000490751 GCNT2Q8N0V5 402 aa28.34■■■□□ 2.13
LDB1-204ENST00000490751 MEIOBQ8N635 442 aa28.34■■■□□ 2.13
LDB1-204ENST00000490751 PSMA8Q8TAA3 256 aa28.34■■■□□ 2.13
LDB1-204ENST00000490751 C20orf27Q9GZN8 174 aa28.34■■■□□ 2.13
LDB1-204ENST00000490751 CXorf36Q9H7Y0 433 aa28.34■■■□□ 2.13
LDB1-204ENST00000490751 JKAMPQ9P055 326 aa28.34■■■□□ 2.13
LDB1-204ENST00000490751 RAP2CQ9Y3L5 183 aa28.34■■■□□ 2.13
LDB1-204ENST00000490751 ZNF337Q9Y3M9 751 aa28.34■■■□□ 2.13
LDB1-204ENST00000490751 ACTL7BQ9Y614 415 aa28.34■■■□□ 2.13
LDB1-204ENST00000490751 TBXA2RP21731 343 aa28.33■■■□□ 2.13
LDB1-204ENST00000490751 CCT3P49368 545 aaKnown RBP28.33■■■□□ 2.13
LDB1-204ENST00000490751 POU6F2P78424 691 aaPredicted RBP28.33■■■□□ 2.13
LDB1-204ENST00000490751 LSM12Q3MHD2 195 aaKnown RBP28.33■■■□□ 2.13
LDB1-204ENST00000490751 CCNJQ5T5M9 372 aa28.33■■■□□ 2.13
LDB1-204ENST00000490751 CHMP1BQ7LBR1 199 aa28.33■■■□□ 2.13
LDB1-204ENST00000490751 CROCCP2Q86T23 111 aa28.33■■■□□ 2.13
LDB1-204ENST00000490751 GATSQ8NAP1 163 aa28.33■■■□□ 2.13
LDB1-204ENST00000490751 GOT1L1Q8NHS2 421 aaPredicted RBP28.33■■■□□ 2.13
LDB1-204ENST00000490751 STACQ99469 402 aa28.33■■■□□ 2.13
LDB1-204ENST00000490751 PIGQQ9BRB3 760 aa28.33■■■□□ 2.13
LDB1-204ENST00000490751 BHLHE41Q9C0J9 482 aaPredicted RBP28.33■■■□□ 2.13
LDB1-204ENST00000490751 ACBD3Q9H3P7 528 aa28.33■■■□□ 2.13
LDB1-204ENST00000490751 DUSP22Q9NRW4 184 aa28.33■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms