RNA–Protein interactions for RNA: ENST00000489906.5

VDAC1-206, Transcript of voltage dependent anion channel 1, humanhuman

TSL 2

Gene VDAC1, Length 694 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDAC1-206ENST00000489906 GANABQ14697 944 aaKnown RBP11.28□□□□□ -0.6
VDAC1-206ENST00000489906 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.28□□□□□ -0.6
VDAC1-206ENST00000489906 GRAMD1BQ3KR37 738 aa11.28□□□□□ -0.6
VDAC1-206ENST00000489906 UNC50Q53HI1 259 aa11.28□□□□□ -0.6
VDAC1-206ENST00000489906 ACSM2BQ68CK6 577 aa11.28□□□□□ -0.6
VDAC1-206ENST00000489906 EXOC3L1Q86VI1 746 aa11.28□□□□□ -0.6
VDAC1-206ENST00000489906 FBXO30Q8TB52 745 aa11.28□□□□□ -0.6
VDAC1-206ENST00000489906 METTL6Q8TCB7 284 aa11.28□□□□□ -0.6
VDAC1-206ENST00000489906 PIK3R3Q92569 461 aa11.28□□□□□ -0.6
VDAC1-206ENST00000489906 GTPBP3Q969Y2 492 aaKnown RBP11.28□□□□□ -0.6
VDAC1-206ENST00000489906 S100PBPQ96BU1 408 aa11.28□□□□□ -0.6
VDAC1-206ENST00000489906 ERP27Q96DN0 273 aa11.28□□□□□ -0.6
VDAC1-206ENST00000489906 KLHDC3Q9BQ90 382 aa11.28□□□□□ -0.6
VDAC1-206ENST00000489906 MRPL57Q9BQC6 102 aaKnown RBP11.28□□□□□ -0.6
VDAC1-206ENST00000489906 REG4Q9BYZ8 158 aa11.28□□□□□ -0.6
VDAC1-206ENST00000489906 MRPL46Q9H2W6 279 aaKnown RBP11.28□□□□□ -0.6
VDAC1-206ENST00000489906 ACSS3Q9H6R3 686 aa11.28□□□□□ -0.6
VDAC1-206ENST00000489906 EQTNQ9NQ60 294 aa11.28□□□□□ -0.6
VDAC1-206ENST00000489906 PLSCR4Q9NRQ2 329 aa11.28□□□□□ -0.6
VDAC1-206ENST00000489906 DDX18Q9NVP1 670 aaKnown RBP11.28□□□□□ -0.6
VDAC1-206ENST00000489906 FAM120CQ9NX05 1096 aaKnown RBP11.28□□□□□ -0.6
VDAC1-206ENST00000489906 ABCG2Q9UNQ0 655 aa11.28□□□□□ -0.6
VDAC1-206ENST00000489906 AP4B1Q9Y6B7 739 aa11.28□□□□□ -0.6
VDAC1-206ENST00000489906 TRIM49D1C9J1S8 452 aa11.27□□□□□ -0.61
VDAC1-206ENST00000489906 POC1B-GALNT4F8VUJ3 575 aa11.27□□□□□ -0.61
VDAC1-206ENST00000489906 UPK1AO00322 258 aa11.27□□□□□ -0.61
VDAC1-206ENST00000489906 SS18L1O75177 396 aaPredicted RBP11.27□□□□□ -0.61
VDAC1-206ENST00000489906 COQ9O75208 318 aa11.27□□□□□ -0.61
VDAC1-206ENST00000489906 ULK1O75385 1050 aa11.27□□□□□ -0.61
VDAC1-206ENST00000489906 SOX30O94993 753 aa11.27□□□□□ -0.61
VDAC1-206ENST00000489906 SYNGR4O95473 234 aa11.27□□□□□ -0.61
VDAC1-206ENST00000489906 IL33O95760 270 aa11.27□□□□□ -0.61
VDAC1-206ENST00000489906 IGKV1D-16P01601 117 aa11.27□□□□□ -0.61
VDAC1-206ENST00000489906 ANXA4P09525 319 aaPredicted RBP11.27□□□□□ -0.61
VDAC1-206ENST00000489906 PPP3CBP16298 524 aa11.27□□□□□ -0.61
VDAC1-206ENST00000489906 PTNP21246 168 aa11.27□□□□□ -0.61
VDAC1-206ENST00000489906 GABRA3P34903 492 aa11.27□□□□□ -0.61
VDAC1-206ENST00000489906 PHBP35232 272 aa11.27□□□□□ -0.61
VDAC1-206ENST00000489906 CLK3P49761 638 aaKnown RBP11.27□□□□□ -0.61
VDAC1-206ENST00000489906 RNF144AP50876 292 aaPredicted RBP11.27□□□□□ -0.61
VDAC1-206ENST00000489906 CSTF3Q12996 717 aaKnown RBP11.27□□□□□ -0.61
VDAC1-206ENST00000489906 HEPACAMQ14CZ8 416 aa11.27□□□□□ -0.61
VDAC1-206ENST00000489906 TSNAXIP1Q2TAA8 658 aa11.27□□□□□ -0.61
VDAC1-206ENST00000489906 CYP27C1Q4G0S4 372 aa11.27□□□□□ -0.61
VDAC1-206ENST00000489906 SPDYAQ5MJ70 313 aa11.27□□□□□ -0.61
VDAC1-206ENST00000489906 HEPHL1Q6MZM0 1159 aa11.27□□□□□ -0.61
VDAC1-206ENST00000489906 MFSD12Q6NUT3 480 aa11.27□□□□□ -0.61
VDAC1-206ENST00000489906 GPRIN3Q6ZVF9 776 aa11.27□□□□□ -0.61
VDAC1-206ENST00000489906 LILRB1Q8NHL6 650 aaPredicted RBP11.27□□□□□ -0.61
VDAC1-206ENST00000489906 ROBO4Q8WZ75 1007 aa11.27□□□□□ -0.61
VDAC1-206ENST00000489906 SH3YL1Q96HL8 342 aaPredicted RBP11.27□□□□□ -0.61
VDAC1-206ENST00000489906 GMPPAQ96IJ6 420 aaPredicted RBP11.27□□□□□ -0.61
VDAC1-206ENST00000489906 PAFAH2Q99487 392 aa11.27□□□□□ -0.61
VDAC1-206ENST00000489906 TMEM204Q9BSN7 226 aa11.27□□□□□ -0.61
VDAC1-206ENST00000489906 Q9N2J8 555 aa11.27□□□□□ -0.61
VDAC1-206ENST00000489906 MCTS1Q9ULC4 181 aaKnown RBP11.27□□□□□ -0.61
VDAC1-206ENST00000489906 LIPT1Q9Y234 373 aa11.27□□□□□ -0.61
VDAC1-206ENST00000489906 MAGED1Q9Y5V3 778 aaPredicted RBP11.27□□□□□ -0.61
VDAC1-206ENST00000489906 FREM1Q5H8C1 2179 aa11.27□□□□□ -0.61
VDAC1-206ENST00000489906 MYO1GB0I1T2 1018 aa11.26□□□□□ -0.61
VDAC1-206ENST00000489906 LINC01387J3KSC0 135 aa11.26□□□□□ -0.61
VDAC1-206ENST00000489906 NDUFB5O43674 189 aa11.26□□□□□ -0.61
VDAC1-206ENST00000489906 ADAM11O75078 769 aa11.26□□□□□ -0.61
VDAC1-206ENST00000489906 IL11P20809 199 aa11.26□□□□□ -0.61
VDAC1-206ENST00000489906 OCRLQ01968 901 aa11.26□□□□□ -0.61
VDAC1-206ENST00000489906 RASA2Q15283 850 aa11.26□□□□□ -0.61
VDAC1-206ENST00000489906 TMEM44Q2T9K0 475 aa11.26□□□□□ -0.61
VDAC1-206ENST00000489906 SAMD14Q8IZD0 417 aaPredicted RBP11.26□□□□□ -0.61
VDAC1-206ENST00000489906 TMEM151AQ8N4L1 468 aa11.26□□□□□ -0.61
VDAC1-206ENST00000489906 KBTBD8Q8NFY9 601 aa11.26□□□□□ -0.61
VDAC1-206ENST00000489906 OTUB1Q96FW1 271 aaPredicted RBP11.26□□□□□ -0.61
VDAC1-206ENST00000489906 RNF145Q96MT1 663 aa11.26□□□□□ -0.61
VDAC1-206ENST00000489906 TMEM237Q96Q45 408 aa11.26□□□□□ -0.61
VDAC1-206ENST00000489906 TACO1Q9BSH4 297 aaKnown RBP11.26□□□□□ -0.61
VDAC1-206ENST00000489906 SLCO5A1Q9H2Y9 848 aa11.26□□□□□ -0.61
VDAC1-206ENST00000489906 GLIPR2Q9H4G4 154 aa11.26□□□□□ -0.61
VDAC1-206ENST00000489906 MIEF1Q9NQG6 463 aa11.26□□□□□ -0.61
VDAC1-206ENST00000489906 ZDHHC18Q9NUE0 388 aa11.26□□□□□ -0.61
VDAC1-206ENST00000489906 GDF2Q9UK05 429 aaPredicted RBP11.26□□□□□ -0.61
VDAC1-206ENST00000489906 C19orf53Q9UNZ5 99 aaPredicted RBP11.26□□□□□ -0.61
VDAC1-206ENST00000489906 RNF115Q9Y4L5 304 aa11.26□□□□□ -0.61
VDAC1-206ENST00000489906 POLR3HQ9Y535 204 aaPredicted RBP11.26□□□□□ -0.61
VDAC1-206ENST00000489906 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.26□□□□□ -0.612e-8■■■■■ 28.1
VDAC1-206ENST00000489906 A0A0J9YW62 118 aa11.25□□□□□ -0.61
VDAC1-206ENST00000489906 IGHV4-39P01824 125 aa11.25□□□□□ -0.61
VDAC1-206ENST00000489906 HSD3B1P14060 373 aa11.25□□□□□ -0.61
VDAC1-206ENST00000489906 DDCP20711 480 aa11.25□□□□□ -0.61
VDAC1-206ENST00000489906 HSD3B2P26439 372 aa11.25□□□□□ -0.61
VDAC1-206ENST00000489906 SHC1P29353 583 aa11.25□□□□□ -0.61
VDAC1-206ENST00000489906 AGTR1P30556 359 aa11.25□□□□□ -0.61
VDAC1-206ENST00000489906 SFTPDP35247 375 aa11.25□□□□□ -0.61
VDAC1-206ENST00000489906 IDUAP35475 653 aa11.25□□□□□ -0.61
VDAC1-206ENST00000489906 PSPHP78330 225 aa11.25□□□□□ -0.61
VDAC1-206ENST00000489906 C17orf67Q0P5P2 114 aa11.25□□□□□ -0.61
VDAC1-206ENST00000489906 ZNHIT3Q15649 155 aaPredicted RBP11.25□□□□□ -0.61
VDAC1-206ENST00000489906 SPIN4Q56A73 249 aa11.25□□□□□ -0.61
VDAC1-206ENST00000489906 ZNF678Q5SXM1 525 aa11.25□□□□□ -0.61
VDAC1-206ENST00000489906 HBMQ6B0K9 141 aa11.25□□□□□ -0.61
VDAC1-206ENST00000489906 ANKRD26P1Q6NSI1 321 aa11.25□□□□□ -0.61
VDAC1-206ENST00000489906 ADAM5Q6NVV9 412 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms