RNA–Protein interactions for RNA: ENST00000489868.5

CCDC39-206, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-206ENST00000489868 HOXC4P09017 264 aaPredicted RBP3.36□□□□□ -1.87
CCDC39-206ENST00000489868 XRCC1P18887 633 aaPredicted RBP3.36□□□□□ -1.87
CCDC39-206ENST00000489868 RPL8P62917 257 aaKnown RBP3.36□□□□□ -1.87
CCDC39-206ENST00000489868 EIF4EBP2Q13542 120 aaPredicted RBP3.36□□□□□ -1.87
CCDC39-206ENST00000489868 SNX1Q13596 522 aa3.36□□□□□ -1.87
CCDC39-206ENST00000489868 KARSQ15046 597 aaKnown RBP3.36□□□□□ -1.87
CCDC39-206ENST00000489868 TEX44Q53QW1 395 aa3.36□□□□□ -1.87
CCDC39-206ENST00000489868 CYS1Q717R9 158 aa3.36□□□□□ -1.87
CCDC39-206ENST00000489868 TMEM179BQ7Z7N9 219 aa3.36□□□□□ -1.87
CCDC39-206ENST00000489868 MINDY2Q8NBR6 621 aa3.36□□□□□ -1.87
CCDC39-206ENST00000489868 SLC13A3Q8WWT9 602 aa3.36□□□□□ -1.87
CCDC39-206ENST00000489868 TMEM186Q96B77 213 aa3.36□□□□□ -1.87
CCDC39-206ENST00000489868 RUFY1Q96T51 708 aa3.36□□□□□ -1.87
CCDC39-206ENST00000489868 WRAP53Q9BUR4 548 aaKnown RBP3.36□□□□□ -1.87
CCDC39-206ENST00000489868 KRTAP4-3Q9BYR4 195 aa3.36□□□□□ -1.87
CCDC39-206ENST00000489868 KAT8Q9H7Z6 458 aaKnown RBP3.36□□□□□ -1.87
CCDC39-206ENST00000489868 TRPV5Q9NQA5 729 aa3.36□□□□□ -1.87
CCDC39-206ENST00000489868 UTP6Q9NYH9 597 aaKnown RBP3.36□□□□□ -1.87
CCDC39-206ENST00000489868 ANKMY1Q9P2S6 941 aa3.36□□□□□ -1.87
CCDC39-206ENST00000489868 PLA2G4CQ9UP65 541 aa3.36□□□□□ -1.87
CCDC39-206ENST00000489868 NEU3Q9UQ49 428 aa3.36□□□□□ -1.87
CCDC39-206ENST00000489868 H3BTX0 84 aa3.35□□□□□ -1.87
CCDC39-206ENST00000489868 CASKO14936 926 aa3.35□□□□□ -1.87
CCDC39-206ENST00000489868 SEMG1P04279 462 aa3.35□□□□□ -1.87
CCDC39-206ENST00000489868 SLC26A2P50443 739 aa3.35□□□□□ -1.87
CCDC39-206ENST00000489868 CAV2P51636 162 aa3.35□□□□□ -1.87
CCDC39-206ENST00000489868 OTUD4Q01804 1114 aaKnown RBP3.35□□□□□ -1.87
CCDC39-206ENST00000489868 PDIA5Q14554 519 aa3.35□□□□□ -1.87
CCDC39-206ENST00000489868 CDKN3Q16667 212 aa3.35□□□□□ -1.87
CCDC39-206ENST00000489868 OLFM4Q6UX06 510 aa3.35□□□□□ -1.87
CCDC39-206ENST00000489868 SERPINA9Q86WD7 417 aa3.35□□□□□ -1.87
CCDC39-206ENST00000489868 BBS1Q8NFJ9 593 aa3.35□□□□□ -1.87
CCDC39-206ENST00000489868 FAM104AQ969W3 186 aa3.35□□□□□ -1.87
CCDC39-206ENST00000489868 MARC2Q969Z3 335 aa3.35□□□□□ -1.87
CCDC39-206ENST00000489868 OR51J1Q9H342 316 aa3.35□□□□□ -1.87
CCDC39-206ENST00000489868 TMEM231Q9H6L2 316 aa3.35□□□□□ -1.87
CCDC39-206ENST00000489868 IL19Q9UHD0 177 aa3.35□□□□□ -1.87
CCDC39-206ENST00000489868 PPIAL4AQ9Y536 164 aa3.35□□□□□ -1.87
CCDC39-206ENST00000489868 PINLYPA6NC86 204 aa3.34□□□□□ -1.87
CCDC39-206ENST00000489868 ARHGAP42A6NI28 874 aa3.34□□□□□ -1.87
CCDC39-206ENST00000489868 PDXKO00764 312 aa3.34□□□□□ -1.87
CCDC39-206ENST00000489868 LYPLA1O75608 230 aaPredicted RBP3.34□□□□□ -1.87
CCDC39-206ENST00000489868 GPX5O75715 221 aa3.34□□□□□ -1.87
CCDC39-206ENST00000489868 STSP08842 583 aa3.34□□□□□ -1.87
CCDC39-206ENST00000489868 CCNA2P20248 432 aa3.34□□□□□ -1.87
CCDC39-206ENST00000489868 RPA1P27694 616 aa3.34□□□□□ -1.87
CCDC39-206ENST00000489868 CCDC40Q4G0X9 1142 aa3.34□□□□□ -1.87
CCDC39-206ENST00000489868 PVRIGQ6DKI7 326 aa3.34□□□□□ -1.87
CCDC39-206ENST00000489868 OR5M10Q6IEU7 315 aa3.34□□□□□ -1.87
CCDC39-206ENST00000489868 KRTAP5-5Q701N2 237 aaPredicted RBP3.34□□□□□ -1.87
CCDC39-206ENST00000489868 HSD17B13Q7Z5P4 300 aaPredicted RBP3.34□□□□□ -1.87
CCDC39-206ENST00000489868 OR2T33Q8NG76 320 aa3.34□□□□□ -1.87
CCDC39-206ENST00000489868 NCLNQ969V3 563 aa3.34□□□□□ -1.87
CCDC39-206ENST00000489868 NSMCE2Q96MF7 247 aa3.34□□□□□ -1.87
CCDC39-206ENST00000489868 DHRS7CA6NNS2 312 aa3.33□□□□□ -1.88
CCDC39-206ENST00000489868 CABYRO75952 493 aa3.33□□□□□ -1.88
CCDC39-206ENST00000489868 ANP32DO95626 131 aa3.33□□□□□ -1.88
CCDC39-206ENST00000489868 ALPPP05187 535 aa3.33□□□□□ -1.88
CCDC39-206ENST00000489868 GSTT2P0CG29 244 aa3.33□□□□□ -1.88
CCDC39-206ENST00000489868 GSTT2BP0CG30 244 aa3.33□□□□□ -1.88
CCDC39-206ENST00000489868 ALPPL2P10696 532 aa3.33□□□□□ -1.88
CCDC39-206ENST00000489868 ADORA2BP29275 332 aa3.33□□□□□ -1.88
CCDC39-206ENST00000489868 EMDP50402 254 aa3.33□□□□□ -1.88
CCDC39-206ENST00000489868 NOVA1P51513 510 aaKnown RBP3.33□□□□□ -1.88
CCDC39-206ENST00000489868 RND3P61587 244 aa3.33□□□□□ -1.88
CCDC39-206ENST00000489868 MRPS11P82912 194 aaKnown RBP3.33□□□□□ -1.88
CCDC39-206ENST00000489868 VLDLRP98155 873 aa3.33□□□□□ -1.88
CCDC39-206ENST00000489868 ZNF45Q02386 682 aa3.33□□□□□ -1.88
CCDC39-206ENST00000489868 OC90Q02509 493 aaPredicted RBP3.33□□□□□ -1.88
CCDC39-206ENST00000489868 ELAVL3Q14576 367 aaKnown RBP3.33□□□□□ -1.88
CCDC39-206ENST00000489868 CELF3Q5SZQ8 465 aaKnown RBP3.33□□□□□ -1.88
CCDC39-206ENST00000489868 MIER3Q7Z3K6 550 aa3.33□□□□□ -1.88
CCDC39-206ENST00000489868 HSD11B1LQ7Z5J1 315 aa3.33□□□□□ -1.88
CCDC39-206ENST00000489868 IFNEQ86WN2 208 aa3.33□□□□□ -1.88
CCDC39-206ENST00000489868 C17orf82Q86X59 251 aaPredicted RBP3.33□□□□□ -1.88
CCDC39-206ENST00000489868 RNF148Q8N7C7 305 aa3.33□□□□□ -1.88
CCDC39-206ENST00000489868 OR2A12Q8NGT7 310 aa3.33□□□□□ -1.88
CCDC39-206ENST00000489868 MGARPQ8TDB4 240 aa3.33□□□□□ -1.88
CCDC39-206ENST00000489868 SLC25A51Q9H1U9 297 aa3.33□□□□□ -1.88
CCDC39-206ENST00000489868 PTGES2Q9H7Z7 377 aa3.33□□□□□ -1.88
CCDC39-206ENST00000489868 ANO10Q9NW15 660 aa3.33□□□□□ -1.88
CCDC39-206ENST00000489868 C1orf123Q9NWV4 160 aa3.33□□□□□ -1.88
CCDC39-206ENST00000489868 OR1A1Q9P1Q5 309 aa3.33□□□□□ -1.88
CCDC39-206ENST00000489868 GALPQ9UBC7 116 aa3.33□□□□□ -1.88
CCDC39-206ENST00000489868 TUBAL3A6NHL2 446 aa3.32□□□□□ -1.88
CCDC39-206ENST00000489868 RALAP11233 206 aa3.32□□□□□ -1.88
CCDC39-206ENST00000489868 NR2C1P13056 603 aa3.32□□□□□ -1.88
CCDC39-206ENST00000489868 IGLL1P15814 213 aa3.32□□□□□ -1.88
CCDC39-206ENST00000489868 VDAC1P21796 283 aa3.32□□□□□ -1.88
CCDC39-206ENST00000489868 RPL29P47914 159 aaKnown RBP3.32□□□□□ -1.88
CCDC39-206ENST00000489868 UCNP55089 124 aa3.32□□□□□ -1.88
CCDC39-206ENST00000489868 GABPB1Q06547 395 aaPredicted RBP3.32□□□□□ -1.88
CCDC39-206ENST00000489868 PDK1Q15118 436 aa3.32□□□□□ -1.88
CCDC39-206ENST00000489868 LDLRAP1Q5SW96 308 aa3.32□□□□□ -1.88
CCDC39-206ENST00000489868 KHDRBS2Q5VWX1 349 aaKnown RBP3.32□□□□□ -1.88
CCDC39-206ENST00000489868 NEK5Q6P3R8 708 aa3.32□□□□□ -1.88
CCDC39-206ENST00000489868 ELMOD2Q8IZ81 293 aa3.32□□□□□ -1.88
CCDC39-206ENST00000489868 NEIL2Q969S2 332 aa3.32□□□□□ -1.88
CCDC39-206ENST00000489868 VPS39Q96JC1 886 aa3.32□□□□□ -1.88
CCDC39-206ENST00000489868 SDHCQ99643 169 aaPredicted RBP3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms