RNA–Protein interactions for RNA: ENST00000489403.1

CPSF3-204, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 5

Gene CPSF3, Length 688 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-204ENST00000489403 OCRLQ01968 901 aa11.13□□□□□ -0.63
CPSF3-204ENST00000489403 ZNHIT3Q15649 155 aaPredicted RBP11.13□□□□□ -0.63
CPSF3-204ENST00000489403 IMPG1Q17R60 797 aa11.13□□□□□ -0.63
CPSF3-204ENST00000489403 TMEM44Q2T9K0 475 aa11.13□□□□□ -0.63
CPSF3-204ENST00000489403 ANKRD34AQ69YU3 496 aa11.13□□□□□ -0.63
CPSF3-204ENST00000489403 PRIMA1Q86XR5 153 aa11.13□□□□□ -0.63
CPSF3-204ENST00000489403 NUDT8Q8WV74 236 aa11.13□□□□□ -0.63
CPSF3-204ENST00000489403 CAVIN3Q969G5 261 aa11.13□□□□□ -0.63
CPSF3-204ENST00000489403 NPAS1Q99742 590 aa11.13□□□□□ -0.63
CPSF3-204ENST00000489403 BDH2Q9BUT1 245 aa11.13□□□□□ -0.63
CPSF3-204ENST00000489403 TBL1XR1Q9BZK7 514 aa11.13□□□□□ -0.63
CPSF3-204ENST00000489403 KLHL4Q9C0H6 718 aa11.13□□□□□ -0.63
CPSF3-204ENST00000489403 MRTO4Q9UKD2 239 aaKnown RBP11.13□□□□□ -0.63
CPSF3-204ENST00000489403 EMCNQ9ULC0 261 aa11.13□□□□□ -0.63
CPSF3-204ENST00000489403 VDAC3Q9Y277 283 aa11.13□□□□□ -0.63
CPSF3-204ENST00000489403 FN1P02751 2386 aaKnown RBP11.13□□□□□ -0.63
CPSF3-204ENST00000489403 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.12□□□□□ -0.63
CPSF3-204ENST00000489403 EIF1AYO14602 144 aaKnown RBP11.12□□□□□ -0.63
CPSF3-204ENST00000489403 RIPK2O43353 540 aa11.12□□□□□ -0.63
CPSF3-204ENST00000489403 RSL1D1O76021 490 aaKnown RBP11.12□□□□□ -0.63
CPSF3-204ENST00000489403 THBDP07204 575 aa11.12□□□□□ -0.63
CPSF3-204ENST00000489403 GSTA1P08263 222 aa11.12□□□□□ -0.63
CPSF3-204ENST00000489403 IFI6P09912 130 aa11.12□□□□□ -0.63
CPSF3-204ENST00000489403 FCGR2AP12318 317 aa11.12□□□□□ -0.63
CPSF3-204ENST00000489403 TBXA2RP21731 343 aa11.12□□□□□ -0.63
CPSF3-204ENST00000489403 GABRA3P34903 492 aa11.12□□□□□ -0.63
CPSF3-204ENST00000489403 EIF1AXP47813 144 aaKnown RBP11.12□□□□□ -0.63
CPSF3-204ENST00000489403 PTH2RP49190 550 aa11.12□□□□□ -0.63
CPSF3-204ENST00000489403 C17orf67Q0P5P2 114 aa11.12□□□□□ -0.63
CPSF3-204ENST00000489403 HSPB3Q12988 150 aa11.12□□□□□ -0.63
CPSF3-204ENST00000489403 SGCBQ16585 318 aa11.12□□□□□ -0.63
CPSF3-204ENST00000489403 EXOC3L2Q2M3D2 409 aa11.12□□□□□ -0.63
CPSF3-204ENST00000489403 GRAMD1BQ3KR37 738 aa11.12□□□□□ -0.63
CPSF3-204ENST00000489403 PPP4R4Q6NUP7 873 aa11.12□□□□□ -0.63
CPSF3-204ENST00000489403 NOXRED1Q6NXP6 359 aa11.12□□□□□ -0.63
CPSF3-204ENST00000489403 IKBIPQ70UQ0 350 aa11.12□□□□□ -0.63
CPSF3-204ENST00000489403 ZNF551Q7Z340 670 aaPredicted RBP11.12□□□□□ -0.63
CPSF3-204ENST00000489403 TRIM46Q7Z4K8 759 aa11.12□□□□□ -0.63
CPSF3-204ENST00000489403 CCNYL1Q8N7R7 359 aa11.12□□□□□ -0.63
CPSF3-204ENST00000489403 OR6K3Q8NGY3 331 aa11.12□□□□□ -0.63
CPSF3-204ENST00000489403 FAM76AQ8TAV0 307 aa11.12□□□□□ -0.63
CPSF3-204ENST00000489403 ACMSDQ8TDX5 336 aa11.12□□□□□ -0.63
CPSF3-204ENST00000489403 MZB1Q8WU39 189 aa11.12□□□□□ -0.63
CPSF3-204ENST00000489403 IGFBPL1Q8WX77 278 aa11.12□□□□□ -0.63
CPSF3-204ENST00000489403 PIK3R3Q92569 461 aa11.12□□□□□ -0.63
CPSF3-204ENST00000489403 HOXB13Q92826 284 aaPredicted RBP11.12□□□□□ -0.63
CPSF3-204ENST00000489403 ADGRG7Q96K78 797 aa11.12□□□□□ -0.63
CPSF3-204ENST00000489403 EGLN2Q96KS0 407 aa11.12□□□□□ -0.63
CPSF3-204ENST00000489403 GSX2Q9BZM3 304 aa11.12□□□□□ -0.63
CPSF3-204ENST00000489403 TNFRSF12AQ9NP84 129 aa11.12□□□□□ -0.63
CPSF3-204ENST00000489403 EQTNQ9NQ60 294 aa11.12□□□□□ -0.63
CPSF3-204ENST00000489403 CLEC4AQ9UMR7 237 aa11.12□□□□□ -0.63
CPSF3-204ENST00000489403 NSD1Q96L73 2696 aaPredicted RBP11.12□□□□□ -0.63
CPSF3-204ENST00000489403 ARID1AO14497 2285 aa11.12□□□□□ -0.63
CPSF3-204ENST00000489403 G3V2L1 256 aa11.11□□□□□ -0.63
CPSF3-204ENST00000489403 KLF4O43474 513 aa11.11□□□□□ -0.63
CPSF3-204ENST00000489403 SS18L1O75177 396 aaPredicted RBP11.11□□□□□ -0.63
CPSF3-204ENST00000489403 KCNH1O95259 989 aa11.11□□□□□ -0.63
CPSF3-204ENST00000489403 OXSR1O95747 527 aaPredicted RBP11.11□□□□□ -0.63
CPSF3-204ENST00000489403 ZNF17P17021 662 aa11.11□□□□□ -0.63
CPSF3-204ENST00000489403 PCSK6P29122 969 aa11.11□□□□□ -0.63
CPSF3-204ENST00000489403 MAP3K8P41279 467 aa11.11□□□□□ -0.63
CPSF3-204ENST00000489403 CTU2Q2VPK5 515 aaKnown RBP11.11□□□□□ -0.63
CPSF3-204ENST00000489403 GLE1Q53GS7 698 aaKnown RBP11.11□□□□□ -0.63
CPSF3-204ENST00000489403 BEX5Q5H9J7 111 aa11.11□□□□□ -0.63
CPSF3-204ENST00000489403 STAC2Q6ZMT1 411 aa11.11□□□□□ -0.63
CPSF3-204ENST00000489403 FRMD7Q6ZUT3 714 aa11.11□□□□□ -0.63
CPSF3-204ENST00000489403 GALNT10Q86SR1 603 aa11.11□□□□□ -0.63
CPSF3-204ENST00000489403 OR10D3Q8NH80 312 aa11.11□□□□□ -0.63
CPSF3-204ENST00000489403 SLC9A6Q92581 669 aa11.11□□□□□ -0.63
CPSF3-204ENST00000489403 GMPPAQ96IJ6 420 aaPredicted RBP11.11□□□□□ -0.63
CPSF3-204ENST00000489403 PRRG4Q9BZD6 226 aa11.11□□□□□ -0.63
CPSF3-204ENST00000489403 C3orf14Q9HBI5 128 aa11.11□□□□□ -0.63
CPSF3-204ENST00000489403 PLSCR4Q9NRQ2 329 aa11.11□□□□□ -0.63
CPSF3-204ENST00000489403 EMC9Q9Y3B6 208 aa11.11□□□□□ -0.63
CPSF3-204ENST00000489403 CCL27Q9Y4X3 112 aa11.11□□□□□ -0.63
CPSF3-204ENST00000489403 UQCRHLA0A096LP55 91 aa11.1□□□□□ -0.63
CPSF3-204ENST00000489403 TTC36A6NLP5 189 aa11.1□□□□□ -0.63
CPSF3-204ENST00000489403 KIAA1324LA8MWY0 1029 aaPredicted RBP11.1□□□□□ -0.63
CPSF3-204ENST00000489403 ALG1L2C9J202 215 aa11.1□□□□□ -0.63
CPSF3-204ENST00000489403 PDPK1O15530 556 aa11.1□□□□□ -0.63
CPSF3-204ENST00000489403 NKX2-2O95096 273 aa11.1□□□□□ -0.63
CPSF3-204ENST00000489403 PLGP00747 810 aaPredicted RBP11.1□□□□□ -0.63
CPSF3-204ENST00000489403 PLAUP00749 431 aa11.1□□□□□ -0.63
CPSF3-204ENST00000489403 MYL2P10916 166 aa11.1□□□□□ -0.63
CPSF3-204ENST00000489403 PRPS2P11908 318 aa11.1□□□□□ -0.63
CPSF3-204ENST00000489403 SLC29A2Q14542 456 aa11.1□□□□□ -0.63
CPSF3-204ENST00000489403 KIAA0040Q15053 153 aa11.1□□□□□ -0.63
CPSF3-204ENST00000489403 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.1□□□□□ -0.63
CPSF3-204ENST00000489403 ZNF385BQ569K4 471 aa11.1□□□□□ -0.63
CPSF3-204ENST00000489403 ANKRD26P1Q6NSI1 321 aa11.1□□□□□ -0.63
CPSF3-204ENST00000489403 ZYG11AQ6WRX3 759 aa11.1□□□□□ -0.63
CPSF3-204ENST00000489403 ZNF704Q6ZNC4 412 aaPredicted RBP11.1□□□□□ -0.63
CPSF3-204ENST00000489403 PLEKHM3Q6ZWE6 761 aa11.1□□□□□ -0.63
CPSF3-204ENST00000489403 TRMT10CQ7L0Y3 403 aaKnown RBP11.1□□□□□ -0.63
CPSF3-204ENST00000489403 EXOC3L1Q86VI1 746 aa11.1□□□□□ -0.63
CPSF3-204ENST00000489403 GATSQ8NAP1 163 aa11.1□□□□□ -0.63
CPSF3-204ENST00000489403 OR4C3Q8NH37 302 aa11.1□□□□□ -0.63
CPSF3-204ENST00000489403 GPR151Q8TDV0 419 aa11.1□□□□□ -0.63
CPSF3-204ENST00000489403 CIDECQ96AQ7 238 aaPredicted RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms