RNA–Protein interactions for RNA: ENST00000489230.1

COL4A5-206, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 5

Gene COL4A5, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-206ENST00000489230 FLYWCH1Q4VC44 716 aa11.38□□□□□ -0.59
COL4A5-206ENST00000489230 PAGE3Q5JUK9 113 aa11.38□□□□□ -0.59
COL4A5-206ENST00000489230 TNFAIP8L2Q6P589 184 aaPredicted RBP11.38□□□□□ -0.59
COL4A5-206ENST00000489230 DLEU7Q6UYE1 221 aa11.38□□□□□ -0.59
COL4A5-206ENST00000489230 MTERF4Q7Z6M4 381 aaKnown RBP11.38□□□□□ -0.59
COL4A5-206ENST00000489230 PLCZ1Q86YW0 608 aa11.38□□□□□ -0.59
COL4A5-206ENST00000489230 FAM109AQ8N4B1 249 aa11.38□□□□□ -0.59
COL4A5-206ENST00000489230 ST6GALNAC3Q8NDV1 305 aa11.38□□□□□ -0.59
COL4A5-206ENST00000489230 OR5D16Q8NGK9 328 aa11.38□□□□□ -0.59
COL4A5-206ENST00000489230 RNF138Q8WVD3 245 aa11.38□□□□□ -0.59
COL4A5-206ENST00000489230 ROPN1LQ96C74 230 aa11.38□□□□□ -0.59
COL4A5-206ENST00000489230 GPR137Q96N19 417 aa11.38□□□□□ -0.59
COL4A5-206ENST00000489230 LRRC37BQ96QE4 947 aa11.38□□□□□ -0.59
COL4A5-206ENST00000489230 SLX1AQ9BQ83 275 aa11.38□□□□□ -0.59
COL4A5-206ENST00000489230 PTGES2Q9H7Z7 377 aa11.38□□□□□ -0.59
COL4A5-206ENST00000489230 EFCAB1Q9HAE3 211 aa11.38□□□□□ -0.59
COL4A5-206ENST00000489230 ACKR4Q9NPB9 350 aa11.38□□□□□ -0.59
COL4A5-206ENST00000489230 SEC14L3Q9UDX4 400 aa11.38□□□□□ -0.59
COL4A5-206ENST00000489230 PLEKHB1Q9UF11 243 aaPredicted RBP11.38□□□□□ -0.59
COL4A5-206ENST00000489230 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.38□□□□□ -0.59
COL4A5-206ENST00000489230 PRDM4Q9UKN5 801 aa11.38□□□□□ -0.59
COL4A5-206ENST00000489230 AP3M1Q9Y2T2 418 aa11.38□□□□□ -0.59
COL4A5-206ENST00000489230 MRPS18CQ9Y3D5 142 aaKnown RBP11.38□□□□□ -0.59
COL4A5-206ENST00000489230 WIF1Q9Y5W5 379 aa11.38□□□□□ -0.59
COL4A5-206ENST00000489230 KCNE3Q9Y6H6 103 aa11.38□□□□□ -0.59
COL4A5-206ENST00000489230 NOTCH2Q04721 2471 aa11.38□□□□□ -0.59
COL4A5-206ENST00000489230 ENO4A6NNW6 628 aa11.37□□□□□ -0.59
COL4A5-206ENST00000489230 ALG1L2C9J202 215 aa11.37□□□□□ -0.59
COL4A5-206ENST00000489230 NPIPA5E9PKD4 350 aa11.37□□□□□ -0.59
COL4A5-206ENST00000489230 G3V3Y1 287 aa11.37□□□□□ -0.59
COL4A5-206ENST00000489230 HMGN4O00479 90 aa11.37□□□□□ -0.59
COL4A5-206ENST00000489230 SNPHO15079 494 aa11.37□□□□□ -0.59
COL4A5-206ENST00000489230 NDUFB5O43674 189 aa11.37□□□□□ -0.59
COL4A5-206ENST00000489230 HCN1O60741 890 aa11.37□□□□□ -0.59
COL4A5-206ENST00000489230 CBX6O95503 412 aa11.37□□□□□ -0.59
COL4A5-206ENST00000489230 IGKV1D-16P01601 117 aa11.37□□□□□ -0.59
COL4A5-206ENST00000489230 GPX2P18283 190 aa11.37□□□□□ -0.59
COL4A5-206ENST00000489230 PRDX6P30041 224 aa11.37□□□□□ -0.59
COL4A5-206ENST00000489230 DSTNP60981 165 aa11.37□□□□□ -0.59
COL4A5-206ENST00000489230 ZSWIM7Q19AV6 140 aa11.37□□□□□ -0.59
COL4A5-206ENST00000489230 GRAMD1BQ3KR37 738 aa11.37□□□□□ -0.59
COL4A5-206ENST00000489230 GPAT3Q53EU6 434 aa11.37□□□□□ -0.59
COL4A5-206ENST00000489230 KLHL26Q53HC5 615 aa11.37□□□□□ -0.59
COL4A5-206ENST00000489230 RUNDC3AQ59EK9 446 aa11.37□□□□□ -0.59
COL4A5-206ENST00000489230 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.37□□□□□ -0.59
COL4A5-206ENST00000489230 HIST2H2BCQ6DN03 193 aa11.37□□□□□ -0.59
COL4A5-206ENST00000489230 DNAJC14Q6Y2X3 702 aaPredicted RBP11.37□□□□□ -0.59
COL4A5-206ENST00000489230 LRRC74BQ6ZQY2 392 aa11.37□□□□□ -0.59
COL4A5-206ENST00000489230 DHDDSQ86SQ9 333 aa11.37□□□□□ -0.59
COL4A5-206ENST00000489230 GHDCQ8N2G8 530 aa11.37□□□□□ -0.59
COL4A5-206ENST00000489230 OR4C3Q8NH37 302 aa11.37□□□□□ -0.59
COL4A5-206ENST00000489230 DUSP19Q8WTR2 217 aa11.37□□□□□ -0.59
COL4A5-206ENST00000489230 RAB8BQ92930 207 aa11.37□□□□□ -0.59
COL4A5-206ENST00000489230 ANKRD27Q96NW4 1050 aa11.37□□□□□ -0.59
COL4A5-206ENST00000489230 THUMPD3Q9BV44 507 aaKnown RBP11.37□□□□□ -0.59
COL4A5-206ENST00000489230 CCDC106Q9BWC9 280 aa11.37□□□□□ -0.59
COL4A5-206ENST00000489230 SAP130Q9H0E3 1048 aa11.37□□□□□ -0.59
COL4A5-206ENST00000489230 ZDHHC11Q9H8X9 412 aa11.37□□□□□ -0.59
COL4A5-206ENST00000489230 CACYBPQ9HB71 228 aaKnown RBP11.37□□□□□ -0.59
COL4A5-206ENST00000489230 SLC6A13Q9NSD5 602 aa11.37□□□□□ -0.59
COL4A5-206ENST00000489230 PPP4R1LQ9P1A2 415 aa11.37□□□□□ -0.59
COL4A5-206ENST00000489230 P2RX2Q9UBL9 471 aa11.37□□□□□ -0.59
COL4A5-206ENST00000489230 NPIPA1Q9UND3 350 aa11.37□□□□□ -0.59
COL4A5-206ENST00000489230 NTNG1Q9Y2I2 539 aa11.37□□□□□ -0.59
COL4A5-206ENST00000489230 WDR45Q9Y484 360 aa11.37□□□□□ -0.59
COL4A5-206ENST00000489230 DTNAQ9Y4J8 743 aa11.37□□□□□ -0.59
COL4A5-206ENST00000489230 NUP214P35658 2090 aaPredicted RBP11.37□□□□□ -0.59
COL4A5-206ENST00000489230 SPTBN1Q01082 2364 aaKnown RBP11.36□□□□□ -0.59
COL4A5-206ENST00000489230 A0A0G2JPF8 293 aa11.36□□□□□ -0.59
COL4A5-206ENST00000489230 ANKUB1A6NFN9 424 aa11.36□□□□□ -0.59
COL4A5-206ENST00000489230 HNRNPCL2B2RXH8 293 aa11.36□□□□□ -0.59
COL4A5-206ENST00000489230 HNRNPCL3B7ZW38 293 aa11.36□□□□□ -0.59
COL4A5-206ENST00000489230 GTPBP1O00178 669 aaKnown RBP11.36□□□□□ -0.59
COL4A5-206ENST00000489230 SUSD5O60279 629 aa11.36□□□□□ -0.59
COL4A5-206ENST00000489230 HNRNPCL1O60812 293 aaKnown RBP11.36□□□□□ -0.59
COL4A5-206ENST00000489230 TRAPPC6AO75865 159 aa11.36□□□□□ -0.59
COL4A5-206ENST00000489230 UNC5CO95185 931 aa11.36□□□□□ -0.59
COL4A5-206ENST00000489230 OXSR1O95747 527 aaPredicted RBP11.36□□□□□ -0.59
COL4A5-206ENST00000489230 ANGPTL1O95841 491 aa11.36□□□□□ -0.59
COL4A5-206ENST00000489230 TFPTP0C1Z6 253 aa11.36□□□□□ -0.59
COL4A5-206ENST00000489230 HNRNPCL4P0DMR1 293 aa11.36□□□□□ -0.59
COL4A5-206ENST00000489230 BMP2P12643 396 aa11.36□□□□□ -0.59
COL4A5-206ENST00000489230 COX4I1P13073 169 aa11.36□□□□□ -0.59
COL4A5-206ENST00000489230 ADH7P40394 386 aa11.36□□□□□ -0.59
COL4A5-206ENST00000489230 PTGDSP41222 190 aa11.36□□□□□ -0.59
COL4A5-206ENST00000489230 MNAT1P51948 309 aa11.36□□□□□ -0.59
COL4A5-206ENST00000489230 CRISP3P54108 245 aa11.36□□□□□ -0.59
COL4A5-206ENST00000489230 GAS1P54826 345 aa11.36□□□□□ -0.59
COL4A5-206ENST00000489230 CASP9P55211 416 aa11.36□□□□□ -0.59
COL4A5-206ENST00000489230 PMP22Q01453 160 aa11.36□□□□□ -0.59
COL4A5-206ENST00000489230 TRMT5Q32P41 509 aaKnown RBP11.36□□□□□ -0.59
COL4A5-206ENST00000489230 GLYR1Q49A26 553 aaPredicted RBP11.36□□□□□ -0.59
COL4A5-206ENST00000489230 RNFT1Q5M7Z0 435 aa11.36□□□□□ -0.59
COL4A5-206ENST00000489230 CCNJQ5T5M9 372 aa11.36□□□□□ -0.59
COL4A5-206ENST00000489230 PRAMEF8Q5VWM4 474 aa11.36□□□□□ -0.59
COL4A5-206ENST00000489230 PRAMEF7Q5VXH5 474 aa11.36□□□□□ -0.59
COL4A5-206ENST00000489230 BICRALQ6AI39 1079 aa11.36□□□□□ -0.59
COL4A5-206ENST00000489230 ARHGAP11AQ6P4F7 1023 aa11.36□□□□□ -0.59
COL4A5-206ENST00000489230 GFRALQ6UXV0 394 aa11.36□□□□□ -0.59
COL4A5-206ENST00000489230 MARCH3Q86UD3 253 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms