RNA–Protein interactions for RNA: ENST00000489053.1

HDAC6-232, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-232ENST00000489053 ANXA8L1Q5VT79 327 aa8.29□□□□□ -1.08
HDAC6-232ENST00000489053 EEF1A1P5Q5VTE0 462 aa8.29□□□□□ -1.08
HDAC6-232ENST00000489053 NXNQ6DKJ4 435 aa8.29□□□□□ -1.08
HDAC6-232ENST00000489053 OR2A2Q6IF42 318 aa8.29□□□□□ -1.08
HDAC6-232ENST00000489053 MFSD12Q6NUT3 480 aa8.29□□□□□ -1.08
HDAC6-232ENST00000489053 FIGNL1Q6PIW4 674 aa8.29□□□□□ -1.08
HDAC6-232ENST00000489053 GALNT10Q86SR1 603 aa8.29□□□□□ -1.08
HDAC6-232ENST00000489053 KIF18BQ86Y91 864 aa8.29□□□□□ -1.08
HDAC6-232ENST00000489053 MISPQ8IVT2 679 aa8.29□□□□□ -1.08
HDAC6-232ENST00000489053 KRTCAP2Q8N6L1 136 aa8.29□□□□□ -1.08
HDAC6-232ENST00000489053 ZNF614Q8N883 585 aa8.29□□□□□ -1.08
HDAC6-232ENST00000489053 TNIP2Q8NFZ5 429 aa8.29□□□□□ -1.08
HDAC6-232ENST00000489053 OR4A15Q8NGL6 344 aa8.29□□□□□ -1.08
HDAC6-232ENST00000489053 ZPLD1Q8TCW7 415 aa8.29□□□□□ -1.08
HDAC6-232ENST00000489053 SFXN5Q8TD22 340 aa8.29□□□□□ -1.08
HDAC6-232ENST00000489053 FAM120BQ96EK7 910 aaKnown RBP8.29□□□□□ -1.08
HDAC6-232ENST00000489053 WDYHV1Q96HA8 205 aa8.29□□□□□ -1.08
HDAC6-232ENST00000489053 ZFP3Q96NJ6 502 aa8.29□□□□□ -1.08
HDAC6-232ENST00000489053 BTBD2Q9BX70 525 aa8.29□□□□□ -1.08
HDAC6-232ENST00000489053 ACTRT3Q9BYD9 372 aa8.29□□□□□ -1.08
HDAC6-232ENST00000489053 NUF2Q9BZD4 464 aa8.29□□□□□ -1.08
HDAC6-232ENST00000489053 PRRG4Q9BZD6 226 aa8.29□□□□□ -1.08
HDAC6-232ENST00000489053 AKTIPQ9H8T0 292 aa8.29□□□□□ -1.08
HDAC6-232ENST00000489053 UBQLN4Q9NRR5 601 aa8.29□□□□□ -1.08
HDAC6-232ENST00000489053 ZNF629Q9UEG4 869 aaPredicted RBP8.29□□□□□ -1.08
HDAC6-232ENST00000489053 FOXD3Q9UJU5 478 aaPredicted RBP8.29□□□□□ -1.08
HDAC6-232ENST00000489053 EDARQ9UNE0 448 aa8.29□□□□□ -1.08
HDAC6-232ENST00000489053 MRPS18CQ9Y3D5 142 aaKnown RBP8.29□□□□□ -1.08
HDAC6-232ENST00000489053 CCDC168Q8NDH2 2452 aa8.28□□□□□ -1.08
HDAC6-232ENST00000489053 PKDREJQ9NTG1 2253 aa8.28□□□□□ -1.08
HDAC6-232ENST00000489053 DNAJC13O75165 2243 aa8.28□□□□□ -1.08
HDAC6-232ENST00000489053 A0A087WZY1 265 aa8.28□□□□□ -1.08
HDAC6-232ENST00000489053 TMEM120BA0PK00 339 aa8.28□□□□□ -1.08
HDAC6-232ENST00000489053 SLC22A20A6NK97 555 aa8.28□□□□□ -1.08
HDAC6-232ENST00000489053 CLCA1A8K7I4 914 aa8.28□□□□□ -1.08
HDAC6-232ENST00000489053 H3BML4 177 aa8.28□□□□□ -1.08
HDAC6-232ENST00000489053 HCRTR2O43614 444 aa8.28□□□□□ -1.08
HDAC6-232ENST00000489053 ITM2AO43736 263 aa8.28□□□□□ -1.08
HDAC6-232ENST00000489053 FADS1O60427 444 aa8.28□□□□□ -1.08
HDAC6-232ENST00000489053 NKX2-2O95096 273 aa8.28□□□□□ -1.08
HDAC6-232ENST00000489053 PLGP00747 810 aaPredicted RBP8.28□□□□□ -1.08
HDAC6-232ENST00000489053 HMGN2P05204 90 aaKnown RBP8.28□□□□□ -1.08
HDAC6-232ENST00000489053 ACP2P11117 423 aa8.28□□□□□ -1.08
HDAC6-232ENST00000489053 CPN1P15169 458 aa8.28□□□□□ -1.08
HDAC6-232ENST00000489053 LBPP18428 481 aa8.28□□□□□ -1.08
HDAC6-232ENST00000489053 CAPN3P20807 821 aa8.28□□□□□ -1.08
HDAC6-232ENST00000489053 SOX18P35713 384 aa8.28□□□□□ -1.08
HDAC6-232ENST00000489053 CHI3L1P36222 383 aaPredicted RBP8.28□□□□□ -1.08
HDAC6-232ENST00000489053 STARP49675 285 aa8.28□□□□□ -1.08
HDAC6-232ENST00000489053 WNT3P56703 355 aa8.28□□□□□ -1.08
HDAC6-232ENST00000489053 MAGOHP61326 146 aaKnown RBP8.28□□□□□ -1.08
HDAC6-232ENST00000489053 DUSP5Q16690 384 aa8.28□□□□□ -1.08
HDAC6-232ENST00000489053 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.28□□□□□ -1.08
HDAC6-232ENST00000489053 DCST1Q5T197 706 aa8.28□□□□□ -1.08
HDAC6-232ENST00000489053 PDSS1Q5T2R2 415 aa8.28□□□□□ -1.08
HDAC6-232ENST00000489053 ATAD3BQ5T9A4 648 aa8.28□□□□□ -1.08
HDAC6-232ENST00000489053 ARSKQ6UWY0 536 aa8.28□□□□□ -1.08
HDAC6-232ENST00000489053 C16orf62Q7Z3J2 963 aa8.28□□□□□ -1.08
HDAC6-232ENST00000489053 TMCO5AQ8N6Q1 288 aa8.28□□□□□ -1.08
HDAC6-232ENST00000489053 CNEP1R1Q8N9A8 125 aa8.28□□□□□ -1.08
HDAC6-232ENST00000489053 GATSQ8NAP1 163 aa8.28□□□□□ -1.08
HDAC6-232ENST00000489053 SLC16A11Q8NCK7 471 aa8.28□□□□□ -1.08
HDAC6-232ENST00000489053 OR2M3Q8NG83 312 aa8.28□□□□□ -1.08
HDAC6-232ENST00000489053 WNT2BQ93097 391 aa8.28□□□□□ -1.08
HDAC6-232ENST00000489053 ARL8AQ96BM9 186 aa8.28□□□□□ -1.08
HDAC6-232ENST00000489053 INTS12Q96CB8 462 aaKnown RBP8.28□□□□□ -1.08
HDAC6-232ENST00000489053 C14orf79Q96F83 325 aa8.28□□□□□ -1.08
HDAC6-232ENST00000489053 OTUB1Q96FW1 271 aaPredicted RBP8.28□□□□□ -1.08
HDAC6-232ENST00000489053 C16orf58Q96GQ5 468 aa8.28□□□□□ -1.08
HDAC6-232ENST00000489053 SH3YL1Q96HL8 342 aaPredicted RBP8.28□□□□□ -1.08
HDAC6-232ENST00000489053 LURAP1Q96LR2 239 aa8.28□□□□□ -1.08
HDAC6-232ENST00000489053 C3orf30Q96M34 536 aa8.28□□□□□ -1.08
HDAC6-232ENST00000489053 STACQ99469 402 aa8.28□□□□□ -1.08
HDAC6-232ENST00000489053 TUBA1CQ9BQE3 449 aa8.28□□□□□ -1.08
HDAC6-232ENST00000489053 SFXN3Q9BWM7 321 aa8.28□□□□□ -1.08
HDAC6-232ENST00000489053 TRIM8Q9BZR9 551 aa8.28□□□□□ -1.08
HDAC6-232ENST00000489053 HOXD1Q9GZZ0 328 aa8.28□□□□□ -1.08
HDAC6-232ENST00000489053 ENKD1Q9H0I2 346 aa8.28□□□□□ -1.08
HDAC6-232ENST00000489053 MCCC2Q9HCC0 563 aa8.28□□□□□ -1.08
HDAC6-232ENST00000489053 DUSP22Q9NRW4 184 aa8.28□□□□□ -1.08
HDAC6-232ENST00000489053 EXD2Q9NVH0 621 aa8.28□□□□□ -1.08
HDAC6-232ENST00000489053 ARGLU1Q9NWB6 273 aaPredicted RBP8.28□□□□□ -1.08
HDAC6-232ENST00000489053 KCNN3Q9UGI6 736 aa8.28□□□□□ -1.08
HDAC6-232ENST00000489053 GTF3C1Q12789 2109 aa8.27□□□□□ -1.08
HDAC6-232ENST00000489053 RNF103-CHMP3A0A140T963 221 aa8.27□□□□□ -1.09
HDAC6-232ENST00000489053 MBD3L4A6NDZ8 208 aaPredicted RBP8.27□□□□□ -1.09
HDAC6-232ENST00000489053 MBD3L3A6NE82 208 aaPredicted RBP8.27□□□□□ -1.09
HDAC6-232ENST00000489053 MBD3L5A6NJ08 208 aaPredicted RBP8.27□□□□□ -1.09
HDAC6-232ENST00000489053 DUXAA6NLW8 204 aa8.27□□□□□ -1.09
HDAC6-232ENST00000489053 SLCO1B7G3V0H7 640 aa8.27□□□□□ -1.09
HDAC6-232ENST00000489053 KCNK2O95069 426 aa8.27□□□□□ -1.09
HDAC6-232ENST00000489053 SYNGR4O95473 234 aa8.27□□□□□ -1.09
HDAC6-232ENST00000489053 CPSF4O95639 269 aaKnown RBP8.27□□□□□ -1.09
HDAC6-232ENST00000489053 AGR2O95994 175 aa8.27□□□□□ -1.09
HDAC6-232ENST00000489053 KITP10721 976 aa8.27□□□□□ -1.09
HDAC6-232ENST00000489053 FCGR2AP12318 317 aa8.27□□□□□ -1.09
HDAC6-232ENST00000489053 TBXA2RP21731 343 aa8.27□□□□□ -1.09
HDAC6-232ENST00000489053 ARRB2P32121 409 aa8.27□□□□□ -1.09
HDAC6-232ENST00000489053 CPOXP36551 454 aa8.27□□□□□ -1.09
HDAC6-232ENST00000489053 FRKP42685 505 aaPredicted RBP8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms