RNA–Protein interactions for RNA: ENST00000488920.2

CCHCR1-215, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 715 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-215ENST00000488920 PPP3R2Q96LZ3 170 aa10.78□□□□□ -0.68
CCHCR1-215ENST00000488920 ZFP3Q96NJ6 502 aa10.78□□□□□ -0.68
CCHCR1-215ENST00000488920 GALNT8Q9NY28 637 aa10.78□□□□□ -0.68
CCHCR1-215ENST00000488920 NTMQ9P121 344 aa10.78□□□□□ -0.68
CCHCR1-215ENST00000488920 ATP6V1HQ9UI12 483 aa10.78□□□□□ -0.68
CCHCR1-215ENST00000488920 ZDHHC2Q9UIJ5 367 aa10.78□□□□□ -0.68
CCHCR1-215ENST00000488920 HIVEP1P15822 2718 aa10.78□□□□□ -0.68
CCHCR1-215ENST00000488920 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.77□□□□□ -0.69
CCHCR1-215ENST00000488920 A0A1W2PNV4 684 aa10.77□□□□□ -0.69
CCHCR1-215ENST00000488920 OR2M5A3KFT3 312 aa10.77□□□□□ -0.69
CCHCR1-215ENST00000488920 SLC22A20A6NK97 555 aa10.77□□□□□ -0.69
CCHCR1-215ENST00000488920 TMEM114B3SHH9 223 aa10.77□□□□□ -0.69
CCHCR1-215ENST00000488920 SHISA8B8ZZ34 492 aa10.77□□□□□ -0.69
CCHCR1-215ENST00000488920 H3BML4 177 aa10.77□□□□□ -0.69
CCHCR1-215ENST00000488920 SEC14L5O43304 696 aa10.77□□□□□ -0.69
CCHCR1-215ENST00000488920 HCRTR2O43614 444 aa10.77□□□□□ -0.69
CCHCR1-215ENST00000488920 TNFSF13O75888 250 aa10.77□□□□□ -0.69
CCHCR1-215ENST00000488920 KCNK2O95069 426 aa10.77□□□□□ -0.69
CCHCR1-215ENST00000488920 BPGMP07738 259 aa10.77□□□□□ -0.69
CCHCR1-215ENST00000488920 ALOX5P09917 674 aa10.77□□□□□ -0.69
CCHCR1-215ENST00000488920 LAMP1P11279 417 aa10.77□□□□□ -0.69
CCHCR1-215ENST00000488920 HPCAL1P37235 193 aa10.77□□□□□ -0.69
CCHCR1-215ENST00000488920 CLDN20P56880 219 aa10.77□□□□□ -0.69
CCHCR1-215ENST00000488920 PRR5P85299 388 aa10.77□□□□□ -0.69
CCHCR1-215ENST00000488920 GANABQ14697 944 aaKnown RBP10.77□□□□□ -0.69
CCHCR1-215ENST00000488920 DUSP5Q16690 384 aa10.77□□□□□ -0.69
CCHCR1-215ENST00000488920 XKR7Q5GH72 579 aa10.77□□□□□ -0.69
CCHCR1-215ENST00000488920 FBXW10Q5XX13 1052 aa10.77□□□□□ -0.69
CCHCR1-215ENST00000488920 MFSD12Q6NUT3 480 aa10.77□□□□□ -0.69
CCHCR1-215ENST00000488920 EMBQ6PCB8 327 aa10.77□□□□□ -0.69
CCHCR1-215ENST00000488920 LRIG3Q6UXM1 1119 aa10.77□□□□□ -0.69
CCHCR1-215ENST00000488920 ZAR1Q86SH2 424 aa10.77□□□□□ -0.69
CCHCR1-215ENST00000488920 HOMEZQ8IX15 550 aa10.77□□□□□ -0.69
CCHCR1-215ENST00000488920 GATSQ8NAP1 163 aa10.77□□□□□ -0.69
CCHCR1-215ENST00000488920 FAM110BQ8TC76 370 aa10.77□□□□□ -0.69
CCHCR1-215ENST00000488920 SMPDL3BQ92485 455 aa10.77□□□□□ -0.69
CCHCR1-215ENST00000488920 FIG4Q92562 907 aa10.77□□□□□ -0.69
CCHCR1-215ENST00000488920 CAVIN3Q969G5 261 aa10.77□□□□□ -0.69
CCHCR1-215ENST00000488920 MTERF3Q96E29 417 aa10.77□□□□□ -0.69
CCHCR1-215ENST00000488920 MS4A4EQ96PG1 132 aa10.77□□□□□ -0.69
CCHCR1-215ENST00000488920 PIGQQ9BRB3 760 aa10.77□□□□□ -0.69
CCHCR1-215ENST00000488920 C1orf50Q9BV19 199 aa10.77□□□□□ -0.69
CCHCR1-215ENST00000488920 ACBD3Q9H3P7 528 aa10.77□□□□□ -0.69
CCHCR1-215ENST00000488920 PIGMQ9H3S5 423 aa10.77□□□□□ -0.69
CCHCR1-215ENST00000488920 CCM2LQ9NUG4 571 aaPredicted RBP10.77□□□□□ -0.69
CCHCR1-215ENST00000488920 FBXO34Q9NWN3 711 aa10.77□□□□□ -0.69
CCHCR1-215ENST00000488920 SNX8Q9Y5X2 465 aa10.77□□□□□ -0.69
CCHCR1-215ENST00000488920 ARHGAP21Q5T5U3 1957 aa10.76□□□□□ -0.69
CCHCR1-215ENST00000488920 IGLV3-32A0A0A0MS00 114 aa10.76□□□□□ -0.69
CCHCR1-215ENST00000488920 A0A1W2PRB8 838 aa10.76□□□□□ -0.69
CCHCR1-215ENST00000488920 WDR91A4D1P6 747 aa10.76□□□□□ -0.69
CCHCR1-215ENST00000488920 A8MXE2 369 aa10.76□□□□□ -0.69
CCHCR1-215ENST00000488920 LINC01387J3KSC0 135 aa10.76□□□□□ -0.69
CCHCR1-215ENST00000488920 SCAMP2O15127 329 aaKnown RBP10.76□□□□□ -0.69
CCHCR1-215ENST00000488920 NDUFB5O43674 189 aa10.76□□□□□ -0.69
CCHCR1-215ENST00000488920 TYROBPO43914 113 aa10.76□□□□□ -0.69
CCHCR1-215ENST00000488920 TNFRSF21O75509 655 aa10.76□□□□□ -0.69
CCHCR1-215ENST00000488920 SKAP2O75563 359 aaPredicted RBP10.76□□□□□ -0.69
CCHCR1-215ENST00000488920 SMNDC1O75940 238 aaKnown RBP eCLIP10.76□□□□□ -0.69
CCHCR1-215ENST00000488920 OXSR1O95747 527 aaPredicted RBP10.76□□□□□ -0.69
CCHCR1-215ENST00000488920 CD1EP15812 388 aa10.76□□□□□ -0.69
CCHCR1-215ENST00000488920 TBXA2RP21731 343 aa10.76□□□□□ -0.69
CCHCR1-215ENST00000488920 MAPK1P28482 360 aa10.76□□□□□ -0.69
CCHCR1-215ENST00000488920 SERPINB5P36952 375 aa10.76□□□□□ -0.69
CCHCR1-215ENST00000488920 DIO3P55073 304 aa10.76□□□□□ -0.69
CCHCR1-215ENST00000488920 EEFSECP57772 596 aaKnown RBP10.76□□□□□ -0.69
CCHCR1-215ENST00000488920 EEF1A1P68104 462 aaKnown RBP10.76□□□□□ -0.69
CCHCR1-215ENST00000488920 SORDQ00796 357 aa10.76□□□□□ -0.69
CCHCR1-215ENST00000488920 PTGR1Q14914 329 aa10.76□□□□□ -0.69
CCHCR1-215ENST00000488920 GLYR1Q49A26 553 aaPredicted RBP10.76□□□□□ -0.69
CCHCR1-215ENST00000488920 ATP6AP1LQ52LC2 224 aa10.76□□□□□ -0.69
CCHCR1-215ENST00000488920 C6orf136Q5SQH8 315 aa10.76□□□□□ -0.69
CCHCR1-215ENST00000488920 CCNJQ5T5M9 372 aa10.76□□□□□ -0.69
CCHCR1-215ENST00000488920 CPTPQ5TA50 214 aa10.76□□□□□ -0.69
CCHCR1-215ENST00000488920 EEF1A1P5Q5VTE0 462 aa10.76□□□□□ -0.69
CCHCR1-215ENST00000488920 IL23RQ5VWK5 629 aa10.76□□□□□ -0.69
CCHCR1-215ENST00000488920 WDR93Q6P2C0 686 aa10.76□□□□□ -0.69
CCHCR1-215ENST00000488920 NUDCD3Q8IVD9 361 aa10.76□□□□□ -0.69
CCHCR1-215ENST00000488920 KRTCAP2Q8N6L1 136 aa10.76□□□□□ -0.69
CCHCR1-215ENST00000488920 CNEP1R1Q8N9A8 125 aa10.76□□□□□ -0.69
CCHCR1-215ENST00000488920 FNDC5Q8NAU1 212 aa10.76□□□□□ -0.69
CCHCR1-215ENST00000488920 OR6Y1Q8NGX8 325 aa10.76□□□□□ -0.69
CCHCR1-215ENST00000488920 JADE3Q92613 823 aa10.76□□□□□ -0.69
CCHCR1-215ENST00000488920 ZBTB9Q96C00 473 aa10.76□□□□□ -0.69
CCHCR1-215ENST00000488920 STARD4Q96DR4 205 aa10.76□□□□□ -0.69
CCHCR1-215ENST00000488920 FAM120BQ96EK7 910 aaKnown RBP10.76□□□□□ -0.69
CCHCR1-215ENST00000488920 CHMP6Q96FZ7 201 aa10.76□□□□□ -0.69
CCHCR1-215ENST00000488920 ZNF845Q96IR2 970 aaPredicted RBP10.76□□□□□ -0.69
CCHCR1-215ENST00000488920 TMEM109Q9BVC6 243 aa10.76□□□□□ -0.69
CCHCR1-215ENST00000488920 PINK1Q9BXM7 581 aa10.76□□□□□ -0.69
CCHCR1-215ENST00000488920 ZNF395Q9H8N7 513 aaPredicted RBP10.76□□□□□ -0.69
CCHCR1-215ENST00000488920 SIRT3Q9NTG7 399 aaPredicted RBP10.76□□□□□ -0.69
CCHCR1-215ENST00000488920 ZCCHC3Q9NUD5 404 aaKnown RBP10.76□□□□□ -0.69
CCHCR1-215ENST00000488920 ST6GALNAC2Q9UJ37 374 aa10.76□□□□□ -0.69
CCHCR1-215ENST00000488920 PACSIN3Q9UKS6 424 aa10.76□□□□□ -0.69
CCHCR1-215ENST00000488920 VDAC3Q9Y277 283 aa10.76□□□□□ -0.69
CCHCR1-215ENST00000488920 PLEKHA6Q9Y2H5 1048 aa10.76□□□□□ -0.69
CCHCR1-215ENST00000488920 ANKRD17O75179 2603 aaKnown RBP10.76□□□□□ -0.69
CCHCR1-215ENST00000488920 F8P00451 2351 aa10.76□□□□□ -0.69
CCHCR1-215ENST00000488920 ALG1L2C9J202 215 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms