RNA–Protein interactions for RNA: ENST00000488834.5

SSR1-209, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4

Gene SSR1, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-209ENST00000488834 ZNF85Q03923 595 aa2.87□□□□□ -1.95
SSR1-209ENST00000488834 CUL2Q13617 745 aa2.87□□□□□ -1.95
SSR1-209ENST00000488834 PAGE2BQ5JRK9 111 aa2.87□□□□□ -1.95
SSR1-209ENST00000488834 IL23RQ5VWK5 629 aa2.87□□□□□ -1.95
SSR1-209ENST00000488834 MEDAGQ5VYS4 303 aa2.87□□□□□ -1.95
SSR1-209ENST00000488834 SLC22A10Q63ZE4 541 aa2.87□□□□□ -1.95
SSR1-209ENST00000488834 PRR5LQ6MZQ0 368 aa2.87□□□□□ -1.95
SSR1-209ENST00000488834 DPY19L2P2Q6ZN68 376 aa2.87□□□□□ -1.95
SSR1-209ENST00000488834 UBQLNLQ8IYU4 475 aa2.87□□□□□ -1.95
SSR1-209ENST00000488834 KDM8Q8N371 416 aa2.87□□□□□ -1.95
SSR1-209ENST00000488834 OR2L5Q8NG80 312 aa2.87□□□□□ -1.95
SSR1-209ENST00000488834 OR52E1Q8NGJ3 308 aa2.87□□□□□ -1.95
SSR1-209ENST00000488834 SLC5A11Q8WWX8 675 aa2.87□□□□□ -1.95
SSR1-209ENST00000488834 FCGR1BQ92637 280 aa2.87□□□□□ -1.95
SSR1-209ENST00000488834 DTNBP1Q96EV8 351 aa2.87□□□□□ -1.95
SSR1-209ENST00000488834 ZNF396Q96N95 335 aaPredicted RBP2.87□□□□□ -1.95
SSR1-209ENST00000488834 LZTS2Q9BRK4 669 aa2.87□□□□□ -1.95
SSR1-209ENST00000488834 ERP44Q9BS26 406 aa2.87□□□□□ -1.95
SSR1-209ENST00000488834 ATG10Q9H0Y0 220 aa2.87□□□□□ -1.95
SSR1-209ENST00000488834 SIRPDQ9H106 197 aa2.87□□□□□ -1.95
SSR1-209ENST00000488834 FAM124BQ9H5Z6 455 aaPredicted RBP2.87□□□□□ -1.95
SSR1-209ENST00000488834 NMRK1Q9NWW6 199 aa2.87□□□□□ -1.95
SSR1-209ENST00000488834 TMOD2Q9NZR1 351 aa2.87□□□□□ -1.95
SSR1-209ENST00000488834 COX16Q9P0S2 106 aa2.87□□□□□ -1.95
SSR1-209ENST00000488834 NYAP2Q9P242 653 aa2.87□□□□□ -1.95
SSR1-209ENST00000488834 LHX3Q9UBR4 397 aa2.87□□□□□ -1.95
SSR1-209ENST00000488834 CLIP2Q9UDT6 1046 aa2.87□□□□□ -1.95
SSR1-209ENST00000488834 SLC2A6Q9UGQ3 507 aa2.87□□□□□ -1.95
SSR1-209ENST00000488834 BCAP29Q9UHQ4 241 aa2.87□□□□□ -1.95
SSR1-209ENST00000488834 NUDCQ9Y266 331 aa2.87□□□□□ -1.95
SSR1-209ENST00000488834 SMG6Q86US8 1419 aaKnown RBP2.86□□□□□ -1.95
SSR1-209ENST00000488834 A0A0U1RRA0 63 aa2.86□□□□□ -1.95
SSR1-209ENST00000488834 A0A1B0GUL7 405 aa2.86□□□□□ -1.95
SSR1-209ENST00000488834 LRIT2A6NDA9 550 aa2.86□□□□□ -1.95
SSR1-209ENST00000488834 RASGRF2O14827 1237 aa2.86□□□□□ -1.95
SSR1-209ENST00000488834 KIAA0754O94854 1291 aa2.86□□□□□ -1.95
SSR1-209ENST00000488834 SLC2A10O95528 541 aa2.86□□□□□ -1.95
SSR1-209ENST00000488834 H2AFZP0C0S5 128 aa2.86□□□□□ -1.95
SSR1-209ENST00000488834 CCNCP24863 283 aa2.86□□□□□ -1.95
SSR1-209ENST00000488834 MAT2AP31153 395 aaKnown RBP2.86□□□□□ -1.95
SSR1-209ENST00000488834 IL2RGP31785 369 aa2.86□□□□□ -1.95
SSR1-209ENST00000488834 ACVR1BP36896 505 aa2.86□□□□□ -1.95
SSR1-209ENST00000488834 TRPC1P48995 793 aa2.86□□□□□ -1.95
SSR1-209ENST00000488834 RWDD2BP57060 319 aa2.86□□□□□ -1.95
SSR1-209ENST00000488834 SRYQ05066 204 aa2.86□□□□□ -1.95
SSR1-209ENST00000488834 PUDPQ08623 228 aa2.86□□□□□ -1.95
SSR1-209ENST00000488834 RIPK1Q13546 671 aa2.86□□□□□ -1.95
SSR1-209ENST00000488834 GAMTQ14353 236 aa2.86□□□□□ -1.95
SSR1-209ENST00000488834 PDIA5Q14554 519 aa2.86□□□□□ -1.95
SSR1-209ENST00000488834 KARSQ15046 597 aaKnown RBP2.86□□□□□ -1.95
SSR1-209ENST00000488834 ISXQ2M1V0 245 aa2.86□□□□□ -1.95
SSR1-209ENST00000488834 AGKQ53H12 422 aa2.86□□□□□ -1.95
SSR1-209ENST00000488834 LIPKQ5VXJ0 399 aa2.86□□□□□ -1.95
SSR1-209ENST00000488834 CENPPQ6IPU0 288 aa2.86□□□□□ -1.95
SSR1-209ENST00000488834 NEK5Q6P3R8 708 aa2.86□□□□□ -1.95
SSR1-209ENST00000488834 RBM43Q6ZSC3 357 aaKnown RBP2.86□□□□□ -1.95
SSR1-209ENST00000488834 C1orf186Q6ZWK4 172 aa2.86□□□□□ -1.95
SSR1-209ENST00000488834 RUFY3Q7L099 469 aa2.86□□□□□ -1.95
SSR1-209ENST00000488834 ARMCX2Q7L311 632 aa2.86□□□□□ -1.95
SSR1-209ENST00000488834 P4HA3Q7Z4N8 544 aa2.86□□□□□ -1.95
SSR1-209ENST00000488834 GOLGA7Q7Z5G4 137 aa2.86□□□□□ -1.95
SSR1-209ENST00000488834 ELMOD2Q8IZ81 293 aa2.86□□□□□ -1.95
SSR1-209ENST00000488834 ANKRD49Q8WVL7 239 aa2.86□□□□□ -1.95
SSR1-209ENST00000488834 THRSPQ92748 146 aa2.86□□□□□ -1.95
SSR1-209ENST00000488834 TMEM186Q96B77 213 aa2.86□□□□□ -1.95
SSR1-209ENST00000488834 MRPL38Q96DV4 380 aaKnown RBP2.86□□□□□ -1.95
SSR1-209ENST00000488834 TCEANC2Q96MN5 208 aa2.86□□□□□ -1.95
SSR1-209ENST00000488834 IQCGQ9H095 443 aaKnown RBP2.86□□□□□ -1.95
SSR1-209ENST00000488834 IKZF5Q9H5V7 419 aa2.86□□□□□ -1.95
SSR1-209ENST00000488834 TMEM231Q9H6L2 316 aa2.86□□□□□ -1.95
SSR1-209ENST00000488834 ALG9Q9H6U8 611 aa2.86□□□□□ -1.95
SSR1-209ENST00000488834 TM9SF3Q9HD45 589 aa2.86□□□□□ -1.95
SSR1-209ENST00000488834 NGBQ9NPG2 151 aa2.86□□□□□ -1.95
SSR1-209ENST00000488834 UTP6Q9NYH9 597 aaKnown RBP2.86□□□□□ -1.95
SSR1-209ENST00000488834 MIOXQ9UGB7 285 aa2.86□□□□□ -1.95
SSR1-209ENST00000488834 ABCG2Q9UNQ0 655 aa2.86□□□□□ -1.95
SSR1-209ENST00000488834 MOKQ9UQ07 419 aa2.86□□□□□ -1.95
SSR1-209ENST00000488834 CAB39Q9Y376 341 aaPredicted RBP2.86□□□□□ -1.95
SSR1-209ENST00000488834 DHRS7Q9Y394 339 aa2.86□□□□□ -1.95
SSR1-209ENST00000488834 TMED5Q9Y3A6 229 aa2.86□□□□□ -1.95
SSR1-209ENST00000488834 KDRP35968 1356 aa2.86□□□□□ -1.95
SSR1-209ENST00000488834 ARPC4-TTLL3A0A0A6YYG9 625 aa2.85□□□□□ -1.95
SSR1-209ENST00000488834 A0A1W2PNU3 283 aaPredicted RBP2.85□□□□□ -1.95
SSR1-209ENST00000488834 CTAGE15A4D2H0 777 aa2.85□□□□□ -1.95
SSR1-209ENST00000488834 FAM220BPB1ANY3 271 aa2.85□□□□□ -1.95
SSR1-209ENST00000488834 NPIPA2E9PIF3 369 aa2.85□□□□□ -1.95
SSR1-209ENST00000488834 GMFGO60234 142 aa2.85□□□□□ -1.95
SSR1-209ENST00000488834 SDC3O75056 442 aa2.85□□□□□ -1.95
SSR1-209ENST00000488834 BBOX1O75936 387 aa2.85□□□□□ -1.95
SSR1-209ENST00000488834 LYPD3O95274 346 aa2.85□□□□□ -1.95
SSR1-209ENST00000488834 IGSF6O95976 241 aa2.85□□□□□ -1.95
SSR1-209ENST00000488834 CXCL10P02778 98 aa2.85□□□□□ -1.95
SSR1-209ENST00000488834 HOXB7P09629 217 aa2.85□□□□□ -1.95
SSR1-209ENST00000488834 CD1EP15812 388 aa2.85□□□□□ -1.95
SSR1-209ENST00000488834 MDH1P40925 334 aaKnown RBP2.85□□□□□ -1.95
SSR1-209ENST00000488834 SLC6A8P48029 635 aa2.85□□□□□ -1.95
SSR1-209ENST00000488834 STX17P56962 302 aa2.85□□□□□ -1.95
SSR1-209ENST00000488834 RPS8P62241 208 aaKnown RBP2.85□□□□□ -1.95
SSR1-209ENST00000488834 HERVK_113P63132 956 aa2.85□□□□□ -1.95
SSR1-209ENST00000488834 ERVK-8P63133 956 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 151.7 ms