RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 HSPB3Q12988 150 aa17.92■□□□□ 0.46
CCM2-216ENST00000488727 IQCCQ4KMZ1 466 aa17.92■□□□□ 0.46
CCM2-216ENST00000488727 TRMT12Q53H54 448 aaKnown RBP17.92■□□□□ 0.46
CCM2-216ENST00000488727 ANKRD34AQ69YU3 496 aa17.92■□□□□ 0.46
CCM2-216ENST00000488727 VWA5B2Q8N398 1253 aa17.92■□□□□ 0.46
CCM2-216ENST00000488727 GALNT16Q8N428 558 aa17.92■□□□□ 0.46
CCM2-216ENST00000488727 CHDHQ8NE62 594 aaPredicted RBP17.92■□□□□ 0.46
CCM2-216ENST00000488727 OR1N1Q8NGS0 311 aa17.92■□□□□ 0.46
CCM2-216ENST00000488727 ZNF420Q8TAQ5 688 aaPredicted RBP17.92■□□□□ 0.46
CCM2-216ENST00000488727 PSMF1Q92530 271 aa17.92■□□□□ 0.46
CCM2-216ENST00000488727 KAT2AQ92830 837 aa17.92■□□□□ 0.46
CCM2-216ENST00000488727 ZBED6CLQ96FA7 236 aaPredicted RBP17.92■□□□□ 0.46
CCM2-216ENST00000488727 THOC3Q96J01 351 aaKnown RBP17.92■□□□□ 0.46
CCM2-216ENST00000488727 ACSS1Q9NUB1 689 aaPredicted RBP17.92■□□□□ 0.46
CCM2-216ENST00000488727 ADPRHL2Q9NX46 363 aa17.92■□□□□ 0.46
CCM2-216ENST00000488727 BAG5Q9UL15 447 aa17.92■□□□□ 0.46
CCM2-216ENST00000488727 FAF1Q9UNN5 650 aaPredicted RBP17.92■□□□□ 0.46
CCM2-216ENST00000488727 A6NL46 340 aa17.91■□□□□ 0.46
CCM2-216ENST00000488727 DYRK3O43781 588 aa17.91■□□□□ 0.46
CCM2-216ENST00000488727 C6orf47O95873 294 aa17.91■□□□□ 0.46
CCM2-216ENST00000488727 ITGB2P05107 769 aa17.91■□□□□ 0.46
CCM2-216ENST00000488727 DDX5P17844 614 aaKnown RBP17.91■□□□□ 0.46
CCM2-216ENST00000488727 IGFBP5P24593 272 aa17.91■□□□□ 0.46
CCM2-216ENST00000488727 RAPSNQ13702 412 aa17.91■□□□□ 0.46
CCM2-216ENST00000488727 C6orf141Q5SZD1 244 aa17.91■□□□□ 0.46
CCM2-216ENST00000488727 DDX59Q5T1V6 619 aaKnown RBP eCLIP17.91■□□□□ 0.46
CCM2-216ENST00000488727 GCNT6Q5T4J0 391 aa17.91■□□□□ 0.46
CCM2-216ENST00000488727 KDM4DQ6B0I6 523 aa17.91■□□□□ 0.46
CCM2-216ENST00000488727 KCTD8Q6ZWB6 473 aa17.91■□□□□ 0.46
CCM2-216ENST00000488727 VTCN1Q7Z7D3 282 aa17.91■□□□□ 0.46
CCM2-216ENST00000488727 OR7G2Q8NG99 324 aa17.91■□□□□ 0.46
CCM2-216ENST00000488727 VMP1Q96GC9 406 aa17.91■□□□□ 0.46
CCM2-216ENST00000488727 C7orf34Q96L11 122 aa17.91■□□□□ 0.46
CCM2-216ENST00000488727 DOK1Q99704 481 aa17.91■□□□□ 0.46
CCM2-216ENST00000488727 SLC35A5Q9BS91 424 aa17.91■□□□□ 0.46
CCM2-216ENST00000488727 TMEM38AQ9H6F2 299 aa17.91■□□□□ 0.46
CCM2-216ENST00000488727 GPATCH2Q9NW75 528 aa17.91■□□□□ 0.46
CCM2-216ENST00000488727 TRBV11-1A0A0K0K1C0 115 aa17.9■□□□□ 0.46
CCM2-216ENST00000488727 A0A1W2PRB8 838 aa17.9■□□□□ 0.46
CCM2-216ENST00000488727 PRKNO60260 465 aaPredicted RBP17.9■□□□□ 0.46
CCM2-216ENST00000488727 ABCB7O75027 752 aa17.9■□□□□ 0.46
CCM2-216ENST00000488727 PRKACGP22612 351 aa17.9■□□□□ 0.46
CCM2-216ENST00000488727 PCSK6P29122 969 aa17.9■□□□□ 0.46
CCM2-216ENST00000488727 MANFP55145 182 aaKnown RBP17.9■□□□□ 0.46
CCM2-216ENST00000488727 TPD52P55327 224 aaPredicted RBP17.9■□□□□ 0.46
CCM2-216ENST00000488727 SLC37A1P57057 533 aa17.9■□□□□ 0.46
CCM2-216ENST00000488727 KCNJ10P78508 379 aa17.9■□□□□ 0.46
CCM2-216ENST00000488727 PPP1R8Q12972 351 aaKnown RBP17.9■□□□□ 0.46
CCM2-216ENST00000488727 DUSP8Q13202 625 aa17.9■□□□□ 0.46
CCM2-216ENST00000488727 EXOSC7Q15024 291 aaKnown RBP17.9■□□□□ 0.46
CCM2-216ENST00000488727 TMEM107Q6UX40 140 aa17.9■□□□□ 0.46
CCM2-216ENST00000488727 CCDC80Q76M96 950 aa17.9■□□□□ 0.46
CCM2-216ENST00000488727 GALNT10Q86SR1 603 aa17.9■□□□□ 0.46
CCM2-216ENST00000488727 NATD1Q8N6N6 113 aa17.9■□□□□ 0.46
CCM2-216ENST00000488727 PIK3C3Q8NEB9 887 aa17.9■□□□□ 0.46
CCM2-216ENST00000488727 BRIX1Q8TDN6 353 aaKnown RBP17.9■□□□□ 0.46
CCM2-216ENST00000488727 ZNF566Q969W8 418 aa17.9■□□□□ 0.46
CCM2-216ENST00000488727 ART5Q96L15 291 aa17.9■□□□□ 0.46
CCM2-216ENST00000488727 TAS2R9Q9NYW1 312 aa17.9■□□□□ 0.46
CCM2-216ENST00000488727 BLOC1S6Q9UL45 172 aa17.9■□□□□ 0.46
CCM2-216ENST00000488727 HSPE1-MOB4S4R3N1 261 aa17.9■□□□□ 0.46
CCM2-216ENST00000488727 U3KQV3 271 aa17.9■□□□□ 0.46
CCM2-216ENST00000488727 TMEM229AB2RXF0 380 aa17.89■□□□□ 0.46
CCM2-216ENST00000488727 hCG_2039718K7EN88 272 aa17.89■□□□□ 0.46
CCM2-216ENST00000488727 SUV39H1O43463 412 aa17.89■□□□□ 0.46
CCM2-216ENST00000488727 UGT2B11O75310 529 aa17.89■□□□□ 0.46
CCM2-216ENST00000488727 CEACAM4O75871 244 aa17.89■□□□□ 0.46
CCM2-216ENST00000488727 CBX7O95931 251 aa17.89■□□□□ 0.46
CCM2-216ENST00000488727 DCKP27707 260 aa17.89■□□□□ 0.46
CCM2-216ENST00000488727 MC3RP41968 323 aa17.89■□□□□ 0.46
CCM2-216ENST00000488727 YAP1P46937 504 aaKnown RBP17.89■□□□□ 0.46
CCM2-216ENST00000488727 ISL1P61371 349 aa17.89■□□□□ 0.46
CCM2-216ENST00000488727 CD47Q08722 323 aa17.89■□□□□ 0.46
CCM2-216ENST00000488727 PMS2P3Q13401 168 aa17.89■□□□□ 0.46
CCM2-216ENST00000488727 KEAP1Q14145 624 aa17.89■□□□□ 0.46
CCM2-216ENST00000488727 RAB39AQ14964 217 aa17.89■□□□□ 0.46
CCM2-216ENST00000488727 MLC1Q15049 377 aa17.89■□□□□ 0.46
CCM2-216ENST00000488727 FHL5Q5TD97 284 aa17.89■□□□□ 0.46
CCM2-216ENST00000488727 CYP4Z1Q86W10 505 aa17.89■□□□□ 0.46
CCM2-216ENST00000488727 CLVS1Q8IUQ0 354 aaPredicted RBP17.89■□□□□ 0.46
CCM2-216ENST00000488727 ZNF615Q8N8J6 731 aa17.89■□□□□ 0.46
CCM2-216ENST00000488727 FDCSPQ8NFU4 85 aa17.89■□□□□ 0.46
CCM2-216ENST00000488727 ISOC1Q96CN7 298 aa17.89■□□□□ 0.46
CCM2-216ENST00000488727 EPYCQ99645 322 aa17.89■□□□□ 0.46
CCM2-216ENST00000488727 DOHHQ9BU89 302 aa17.89■□□□□ 0.46
CCM2-216ENST00000488727 LHPPQ9H008 270 aa17.89■□□□□ 0.46
CCM2-216ENST00000488727 COPS7AQ9UBW8 275 aa17.89■□□□□ 0.46
CCM2-216ENST00000488727 CPAMD8Q8IZJ3 1885 aa17.89■□□□□ 0.45
CCM2-216ENST00000488727 BCKDKO14874 412 aa17.89■□□□□ 0.45
CCM2-216ENST00000488727 GCM2O75603 506 aaPredicted RBP17.89■□□□□ 0.45
CCM2-216ENST00000488727 DAPP51397 102 aa17.89■□□□□ 0.45
CCM2-216ENST00000488727 CTU2Q2VPK5 515 aaKnown RBP17.89■□□□□ 0.45
CCM2-216ENST00000488727 LINC00303Q3SY05 128 aa17.89■□□□□ 0.45
CCM2-216ENST00000488727 C9orf40Q8IXQ3 194 aa17.89■□□□□ 0.45
CCM2-216ENST00000488727 SIRT6Q8N6T7 355 aa17.89■□□□□ 0.45
CCM2-216ENST00000488727 SETD9Q8NE22 299 aa17.89■□□□□ 0.45
CCM2-216ENST00000488727 ELP4Q96EB1 424 aa17.89■□□□□ 0.45
CCM2-216ENST00000488727 SH3GL3Q99963 347 aa17.89■□□□□ 0.45
CCM2-216ENST00000488727 REEP1Q9H902 201 aa17.89■□□□□ 0.45
CCM2-216ENST00000488727 TIMMDC1Q9NPL8 285 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms