RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 ZNF324BQ6AW86 544 aaPredicted RBP10.1□□□□□ -0.79
UBE4B-210ENST00000488228 HEPHL1Q6MZM0 1159 aa10.1□□□□□ -0.79
UBE4B-210ENST00000488228 TMEM81Q6P7N7 255 aa10.1□□□□□ -0.79
UBE4B-210ENST00000488228 APOOLQ6UXV4 268 aa10.1□□□□□ -0.79
UBE4B-210ENST00000488228 MARCH3Q86UD3 253 aa10.1□□□□□ -0.79
UBE4B-210ENST00000488228 SIAH3Q8IW03 269 aa10.1□□□□□ -0.79
UBE4B-210ENST00000488228 TMEM251Q8N6I4 163 aa10.1□□□□□ -0.79
UBE4B-210ENST00000488228 CHDHQ8NE62 594 aaPredicted RBP10.1□□□□□ -0.79
UBE4B-210ENST00000488228 OR52N2Q8NGI0 321 aa10.1□□□□□ -0.79
UBE4B-210ENST00000488228 TSPEARQ8WU66 669 aa10.1□□□□□ -0.79
UBE4B-210ENST00000488228 FAR1Q8WVX9 515 aa10.1□□□□□ -0.79
UBE4B-210ENST00000488228 MIB2Q96AX9 1013 aa10.1□□□□□ -0.79
UBE4B-210ENST00000488228 ROPN1LQ96C74 230 aa10.1□□□□□ -0.79
UBE4B-210ENST00000488228 NTNG2Q96CW9 530 aa10.1□□□□□ -0.79
UBE4B-210ENST00000488228 SDF2Q99470 211 aa10.1□□□□□ -0.79
UBE4B-210ENST00000488228 SLX1AQ9BQ83 275 aa10.1□□□□□ -0.79
UBE4B-210ENST00000488228 G6PC3Q9BUM1 346 aa10.1□□□□□ -0.79
UBE4B-210ENST00000488228 ZNF350Q9GZX5 532 aa10.1□□□□□ -0.79
UBE4B-210ENST00000488228 RUBCNLQ9H714 662 aa10.1□□□□□ -0.79
UBE4B-210ENST00000488228 AGPAT4Q9NRZ5 378 aa10.1□□□□□ -0.79
UBE4B-210ENST00000488228 EXD2Q9NVH0 621 aa10.1□□□□□ -0.79
UBE4B-210ENST00000488228 NPIPA1Q9UND3 350 aa10.1□□□□□ -0.79
UBE4B-210ENST00000488228 PCDHGB3Q9Y5G1 929 aa10.1□□□□□ -0.79
UBE4B-210ENST00000488228 LIPGQ9Y5X9 500 aa10.1□□□□□ -0.79
UBE4B-210ENST00000488228 ACOT7O00154 380 aa10.09□□□□□ -0.79
UBE4B-210ENST00000488228 SNPHO15079 494 aa10.09□□□□□ -0.79
UBE4B-210ENST00000488228 ZNHIT1O43257 154 aa10.09□□□□□ -0.79
UBE4B-210ENST00000488228 GMFGO60234 142 aa10.09□□□□□ -0.79
UBE4B-210ENST00000488228 FCMRO60667 390 aa10.09□□□□□ -0.79
UBE4B-210ENST00000488228 H6PDO95479 791 aa10.09□□□□□ -0.79
UBE4B-210ENST00000488228 AGR2O95994 175 aa10.09□□□□□ -0.79
UBE4B-210ENST00000488228 AK1P00568 194 aa10.09□□□□□ -0.79
UBE4B-210ENST00000488228 BCHEP06276 602 aa10.09□□□□□ -0.79
UBE4B-210ENST00000488228 TCEA1P23193 301 aaKnown RBP10.09□□□□□ -0.79
UBE4B-210ENST00000488228 GDF1P27539 372 aa10.09□□□□□ -0.79
UBE4B-210ENST00000488228 ADSLP30566 484 aaPredicted RBP10.09□□□□□ -0.79
UBE4B-210ENST00000488228 UQCRFS1P47985 274 aa10.09□□□□□ -0.79
UBE4B-210ENST00000488228 ANXA11P50995 505 aaKnown RBP10.09□□□□□ -0.79
UBE4B-210ENST00000488228 CYLC2Q14093 348 aaPredicted RBP10.09□□□□□ -0.79
UBE4B-210ENST00000488228 RGNQ15493 299 aa10.09□□□□□ -0.79
UBE4B-210ENST00000488228 GPR68Q15743 365 aa10.09□□□□□ -0.79
UBE4B-210ENST00000488228 MAPK11Q15759 364 aa10.09□□□□□ -0.79
UBE4B-210ENST00000488228 CD226Q15762 336 aa10.09□□□□□ -0.79
UBE4B-210ENST00000488228 ARHGAP11BQ3KRB8 267 aa10.09□□□□□ -0.79
UBE4B-210ENST00000488228 GPAT3Q53EU6 434 aa10.09□□□□□ -0.79
UBE4B-210ENST00000488228 CMPK2Q5EBM0 449 aa10.09□□□□□ -0.79
UBE4B-210ENST00000488228 COQ5Q5HYK3 327 aa10.09□□□□□ -0.79
UBE4B-210ENST00000488228 RPS26P11Q5JNZ5 115 aaPredicted RBP10.09□□□□□ -0.79
UBE4B-210ENST00000488228 OR5M10Q6IEU7 315 aa10.09□□□□□ -0.79
UBE4B-210ENST00000488228 TYW3Q6IPR3 259 aaKnown RBP10.09□□□□□ -0.79
UBE4B-210ENST00000488228 SLC30A6Q6NXT4 461 aa10.09□□□□□ -0.79
UBE4B-210ENST00000488228 FRRS1Q6ZNA5 592 aa10.09□□□□□ -0.79
UBE4B-210ENST00000488228 PACS2Q86VP3 889 aa10.09□□□□□ -0.79
UBE4B-210ENST00000488228 ZNF614Q8N883 585 aa10.09□□□□□ -0.79
UBE4B-210ENST00000488228 OR4C3Q8NH37 302 aa10.09□□□□□ -0.79
UBE4B-210ENST00000488228 MAL2Q969L2 176 aa10.09□□□□□ -0.79
UBE4B-210ENST00000488228 TMEM41AQ96HV5 264 aa10.09□□□□□ -0.79
UBE4B-210ENST00000488228 CGREF1Q99674 301 aa10.09□□□□□ -0.79
UBE4B-210ENST00000488228 BARD1Q99728 777 aaKnown RBP10.09□□□□□ -0.79
UBE4B-210ENST00000488228 TBL1XR1Q9BZK7 514 aa10.09□□□□□ -0.79
UBE4B-210ENST00000488228 QRSL1Q9H0R6 528 aaKnown RBP10.09□□□□□ -0.79
UBE4B-210ENST00000488228 ZFP64Q9NPA5 681 aa10.09□□□□□ -0.79
UBE4B-210ENST00000488228 PPP4R1LQ9P1A2 415 aa10.09□□□□□ -0.79
UBE4B-210ENST00000488228 P2RX2Q9UBL9 471 aa10.09□□□□□ -0.79
UBE4B-210ENST00000488228 KCNE5Q9UJ90 142 aa10.09□□□□□ -0.79
UBE4B-210ENST00000488228 MKLN1Q9UL63 735 aa10.09□□□□□ -0.79
UBE4B-210ENST00000488228 C15orf41Q9Y2V0 281 aa10.09□□□□□ -0.79
UBE4B-210ENST00000488228 FASNP49327 2511 aaKnown RBP10.09□□□□□ -0.79
UBE4B-210ENST00000488228 KIAA1549Q9HCM3 1950 aa10.08□□□□□ -0.8
UBE4B-210ENST00000488228 POLEQ07864 2286 aa10.08□□□□□ -0.8
UBE4B-210ENST00000488228 NPIPB9F8W1W9 429 aa10.08□□□□□ -0.8
UBE4B-210ENST00000488228 SCDO00767 359 aa10.08□□□□□ -0.8
UBE4B-210ENST00000488228 NDUFAB1O14561 156 aa10.08□□□□□ -0.8
UBE4B-210ENST00000488228 OIP5O43482 229 aa10.08□□□□□ -0.8
UBE4B-210ENST00000488228 CDC40O60508 579 aaKnown RBP eCLIP10.08□□□□□ -0.8
UBE4B-210ENST00000488228 STX11O75558 287 aa10.08□□□□□ -0.8
UBE4B-210ENST00000488228 DCTN3O75935 186 aa10.08□□□□□ -0.8
UBE4B-210ENST00000488228 SNX4O95219 450 aa10.08□□□□□ -0.8
UBE4B-210ENST00000488228 ANGPTL1O95841 491 aa10.08□□□□□ -0.8
UBE4B-210ENST00000488228 NGFRP08138 427 aa10.08□□□□□ -0.8
UBE4B-210ENST00000488228 NR2F1P10589 423 aa10.08□□□□□ -0.8
UBE4B-210ENST00000488228 TBXA2RP21731 343 aa10.08□□□□□ -0.8
UBE4B-210ENST00000488228 PPIBP23284 216 aaKnown RBP10.08□□□□□ -0.8
UBE4B-210ENST00000488228 CPA2P48052 419 aa10.08□□□□□ -0.8
UBE4B-210ENST00000488228 TXNL4AP83876 142 aaKnown RBP10.08□□□□□ -0.8
UBE4B-210ENST00000488228 CHRNEQ04844 493 aa10.08□□□□□ -0.8
UBE4B-210ENST00000488228 FADDQ13158 208 aa10.08□□□□□ -0.8
UBE4B-210ENST00000488228 MRPL49Q13405 166 aaKnown RBP10.08□□□□□ -0.8
UBE4B-210ENST00000488228 SNTA1Q13424 505 aa10.08□□□□□ -0.8
UBE4B-210ENST00000488228 NDUFAF6Q330K2 333 aa10.08□□□□□ -0.8
UBE4B-210ENST00000488228 RUNDC3AQ59EK9 446 aa10.08□□□□□ -0.8
UBE4B-210ENST00000488228 RABL3Q5HYI8 236 aa10.08□□□□□ -0.8
UBE4B-210ENST00000488228 PDZK1Q5T2W1 519 aa10.08□□□□□ -0.8
UBE4B-210ENST00000488228 GCNT6Q5T4J0 391 aa10.08□□□□□ -0.8
UBE4B-210ENST00000488228 TIGD3Q6B0B8 471 aa10.08□□□□□ -0.8
UBE4B-210ENST00000488228 ZNF605Q86T29 641 aa10.08□□□□□ -0.8
UBE4B-210ENST00000488228 SLC22A16Q86VW1 577 aa10.08□□□□□ -0.8
UBE4B-210ENST00000488228 SPPL2CQ8IUH8 684 aa10.08□□□□□ -0.8
UBE4B-210ENST00000488228 FAM109AQ8N4B1 249 aa10.08□□□□□ -0.8
UBE4B-210ENST00000488228 WDSUB1Q8N9V3 476 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms