RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 FOXL2P58012 376 aa8.73□□□□□ -1.01
SF3B1-211ENST00000487698 ISL1P61371 349 aa8.73□□□□□ -1.01
SF3B1-211ENST00000487698 RAPSNQ13702 412 aa8.73□□□□□ -1.01
SF3B1-211ENST00000487698 ZNF141Q15928 474 aa8.73□□□□□ -1.01
SF3B1-211ENST00000487698 NNATQ16517 81 aa8.73□□□□□ -1.01
SF3B1-211ENST00000487698 DCST1Q5T197 706 aa8.73□□□□□ -1.01
SF3B1-211ENST00000487698 TTC33Q6PID6 262 aaPredicted RBP8.73□□□□□ -1.01
SF3B1-211ENST00000487698 AQP11Q8NBQ7 271 aa8.73□□□□□ -1.01
SF3B1-211ENST00000487698 MORN4Q8NDC4 146 aa8.73□□□□□ -1.01
SF3B1-211ENST00000487698 ADIPOR1Q96A54 375 aa8.73□□□□□ -1.01
SF3B1-211ENST00000487698 SPSB2Q99619 263 aa8.73□□□□□ -1.01
SF3B1-211ENST00000487698 NUDT9Q9BW91 350 aa8.73□□□□□ -1.01
SF3B1-211ENST00000487698 PRR14Q9BWN1 585 aa8.73□□□□□ -1.01
SF3B1-211ENST00000487698 ANKRD19PQ9H560 264 aa8.73□□□□□ -1.01
SF3B1-211ENST00000487698 TMCC3Q9ULS5 477 aa8.73□□□□□ -1.01
SF3B1-211ENST00000487698 CFL2Q9Y281 166 aa8.73□□□□□ -1.01
SF3B1-211ENST00000487698 FRG2CA6NGY1 282 aa8.72□□□□□ -1.01
SF3B1-211ENST00000487698 IDSB3KWA1 339 aa8.72□□□□□ -1.01
SF3B1-211ENST00000487698 MEN1O00255 615 aa8.72□□□□□ -1.01
SF3B1-211ENST00000487698 BCAS1O75363 584 aaPredicted RBP8.72□□□□□ -1.01
SF3B1-211ENST00000487698 SMNDC1O75940 238 aaKnown RBP eCLIP8.72□□□□□ -1.011e-11■■■■□ 23.3
SF3B1-211ENST00000487698 SEC24DO94855 1032 aaPredicted RBP8.72□□□□□ -1.01
SF3B1-211ENST00000487698 GASTP01350 101 aa8.72□□□□□ -1.01
SF3B1-211ENST00000487698 ZNF28P17035 718 aa8.72□□□□□ -1.01
SF3B1-211ENST00000487698 DRD5P21918 477 aa8.72□□□□□ -1.01
SF3B1-211ENST00000487698 GPR143P51810 404 aa8.72□□□□□ -1.01
SF3B1-211ENST00000487698 TAS2R41P59536 307 aa8.72□□□□□ -1.01
SF3B1-211ENST00000487698 HOXC5Q00444 222 aa8.72□□□□□ -1.01
SF3B1-211ENST00000487698 IL1RL1Q01638 556 aa8.72□□□□□ -1.01
SF3B1-211ENST00000487698 EBPQ15125 230 aaKnown RBP8.72□□□□□ -1.01
SF3B1-211ENST00000487698 CTU2Q2VPK5 515 aaKnown RBP8.72□□□□□ -1.01
SF3B1-211ENST00000487698 ENTPD8Q5MY95 495 aa8.72□□□□□ -1.01
SF3B1-211ENST00000487698 PDZK1Q5T2W1 519 aa8.72□□□□□ -1.01
SF3B1-211ENST00000487698 LAIR2Q6ISS4 152 aa8.72□□□□□ -1.01
SF3B1-211ENST00000487698 LCN10Q6JVE6 187 aa8.72□□□□□ -1.01
SF3B1-211ENST00000487698 MRPL14Q6P1L8 145 aaKnown RBP8.72□□□□□ -1.01
SF3B1-211ENST00000487698 PGBD2Q6P3X8 592 aa8.72□□□□□ -1.01
SF3B1-211ENST00000487698 PODNL1Q6PEZ8 512 aa8.72□□□□□ -1.01
SF3B1-211ENST00000487698 KLHL17Q6TDP4 642 aa8.72□□□□□ -1.01
SF3B1-211ENST00000487698 RBM44Q6ZP01 1051 aaKnown RBP8.72□□□□□ -1.01
SF3B1-211ENST00000487698 SHISA6Q6ZSJ9 500 aa8.72□□□□□ -1.01
SF3B1-211ENST00000487698 GRAMD2AQ8IUY3 354 aa8.72□□□□□ -1.01
SF3B1-211ENST00000487698 CCDC71Q8IV32 467 aaPredicted RBP8.72□□□□□ -1.01
SF3B1-211ENST00000487698 C9orf40Q8IXQ3 194 aa8.72□□□□□ -1.01
SF3B1-211ENST00000487698 ZNF786Q8N393 782 aa8.72□□□□□ -1.01
SF3B1-211ENST00000487698 OR1N1Q8NGS0 311 aa8.72□□□□□ -1.01
SF3B1-211ENST00000487698 ADAMTS16Q8TE57 1224 aa8.72□□□□□ -1.01
SF3B1-211ENST00000487698 PMEPA1Q969W9 287 aa8.72□□□□□ -1.01
SF3B1-211ENST00000487698 HRASLS5Q96KN8 279 aa8.72□□□□□ -1.01
SF3B1-211ENST00000487698 LRFN5Q96NI6 719 aa8.72□□□□□ -1.01
SF3B1-211ENST00000487698 LMF1Q96S06 567 aa8.72□□□□□ -1.01
SF3B1-211ENST00000487698 MCHR1Q99705 422 aa8.72□□□□□ -1.01
SF3B1-211ENST00000487698 EDEM2Q9BV94 578 aa8.72□□□□□ -1.01
SF3B1-211ENST00000487698 DGCR6LQ9BY27 220 aa8.72□□□□□ -1.01
SF3B1-211ENST00000487698 POLR2J2Q9GZM3 115 aaKnown RBP8.72□□□□□ -1.01
SF3B1-211ENST00000487698 POLR2J3Q9H1A7 115 aaKnown RBP8.72□□□□□ -1.01
SF3B1-211ENST00000487698 NXF5Q9H1B4 397 aaKnown RBP8.72□□□□□ -1.01
SF3B1-211ENST00000487698 EVA1AQ9H8M9 152 aa8.72□□□□□ -1.01
SF3B1-211ENST00000487698 CTPS2Q9NRF8 586 aa8.72□□□□□ -1.01
SF3B1-211ENST00000487698 SEMA4GQ9NTN9 838 aa8.72□□□□□ -1.01
SF3B1-211ENST00000487698 MGAT4BQ9UQ53 548 aa8.72□□□□□ -1.01
SF3B1-211ENST00000487698 HSPE1-MOB4S4R3N1 261 aa8.72□□□□□ -1.01
SF3B1-211ENST00000487698 DPPA5A6NC42 116 aa8.72□□□□□ -1.01
SF3B1-211ENST00000487698 CPSF4LA6NMK7 179 aaKnown RBP8.72□□□□□ -1.01
SF3B1-211ENST00000487698 B4E171 279 aa8.72□□□□□ -1.01
SF3B1-211ENST00000487698 AP3D1O14617 1153 aa8.72□□□□□ -1.01
SF3B1-211ENST00000487698 FMO6PO60774 539 aa8.72□□□□□ -1.01
SF3B1-211ENST00000487698 OR5F1O95221 314 aa8.72□□□□□ -1.01
SF3B1-211ENST00000487698 THY1P04216 161 aa8.72□□□□□ -1.01
SF3B1-211ENST00000487698 CYC1P08574 325 aa8.72□□□□□ -1.01
SF3B1-211ENST00000487698 CCNYL3P0C7X3 344 aa8.72□□□□□ -1.01
SF3B1-211ENST00000487698 PRG2P13727 222 aa8.72□□□□□ -1.01
SF3B1-211ENST00000487698 HTR2AP28223 471 aa8.72□□□□□ -1.01
SF3B1-211ENST00000487698 TSPAN7P41732 249 aa8.72□□□□□ -1.01
SF3B1-211ENST00000487698 RFX3P48380 749 aa8.72□□□□□ -1.01
SF3B1-211ENST00000487698 ATP12AP54707 1039 aa8.72□□□□□ -1.01
SF3B1-211ENST00000487698 PSMD4P55036 377 aaKnown RBP8.72□□□□□ -1.01
SF3B1-211ENST00000487698 CD47Q08722 323 aa8.72□□□□□ -1.01
SF3B1-211ENST00000487698 FGFBP1Q14512 234 aa8.72□□□□□ -1.01
SF3B1-211ENST00000487698 ANKRD37Q7Z713 158 aa8.72□□□□□ -1.01
SF3B1-211ENST00000487698 LINC00471Q8N535 108 aa8.72□□□□□ -1.01
SF3B1-211ENST00000487698 ZNF441Q8N8Z8 693 aa8.72□□□□□ -1.01
SF3B1-211ENST00000487698 SETD9Q8NE22 299 aa8.72□□□□□ -1.01
SF3B1-211ENST00000487698 OR4K5Q8NGD3 323 aa8.72□□□□□ -1.01
SF3B1-211ENST00000487698 OIT3Q8WWZ8 545 aa8.72□□□□□ -1.01
SF3B1-211ENST00000487698 LCORQ96JN0 433 aaPredicted RBP8.72□□□□□ -1.01
SF3B1-211ENST00000487698 MESP1Q9BRJ9 268 aa8.72□□□□□ -1.01
SF3B1-211ENST00000487698 YTHDF1Q9BYJ9 559 aaKnown RBP8.72□□□□□ -1.01
SF3B1-211ENST00000487698 MRPS26Q9BYN8 205 aaKnown RBP8.72□□□□□ -1.01
SF3B1-211ENST00000487698 WDR54Q9H977 334 aa8.72□□□□□ -1.01
SF3B1-211ENST00000487698 ZNF556Q9HAH1 456 aa8.72□□□□□ -1.01
SF3B1-211ENST00000487698 TMEM9BQ9NQ34 198 aa8.72□□□□□ -1.01
SF3B1-211ENST00000487698 PPIEQ9UNP9 301 aaKnown RBP8.72□□□□□ -1.01
SF3B1-211ENST00000487698 NTNG1Q9Y2I2 539 aa8.72□□□□□ -1.01
SF3B1-211ENST00000487698 OR10H1Q9Y4A9 318 aa8.72□□□□□ -1.01
SF3B1-211ENST00000487698 PCNX2A6NKB5 2137 aa8.72□□□□□ -1.01
SF3B1-211ENST00000487698 TRIM64CA6NLI5 447 aa8.71□□□□□ -1.01
SF3B1-211ENST00000487698 OR6C76A6NM76 312 aa8.71□□□□□ -1.01
SF3B1-211ENST00000487698 OR10H3O60404 316 aa8.71□□□□□ -1.01
SF3B1-211ENST00000487698 ALOX12BO75342 701 aa8.71□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms