RNA–Protein interactions for RNA: ENST00000487461.1

VPS16-208, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 634 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-208ENST00000487461 C3orf14Q9HBI5 128 aa10.98□□□□□ -0.65
VPS16-208ENST00000487461 LRTM1Q9HBL6 345 aa10.98□□□□□ -0.65
VPS16-208ENST00000487461 EQTNQ9NQ60 294 aa10.98□□□□□ -0.65
VPS16-208ENST00000487461 BEX4Q9NWD9 120 aaPredicted RBP10.98□□□□□ -0.65
VPS16-208ENST00000487461 ELOVL5Q9NYP7 299 aa10.98□□□□□ -0.65
VPS16-208ENST00000487461 FLNAP21333 2647 aaKnown RBP10.98□□□□□ -0.65
VPS16-208ENST00000487461 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.97□□□□□ -0.65
VPS16-208ENST00000487461 TTC36A6NLP5 189 aa10.97□□□□□ -0.65
VPS16-208ENST00000487461 NPIPB8E9PQR5 432 aa10.97□□□□□ -0.65
VPS16-208ENST00000487461 KIF2AO00139 706 aaPredicted RBP10.97□□□□□ -0.65
VPS16-208ENST00000487461 SLC28A1O00337 649 aa10.97□□□□□ -0.65
VPS16-208ENST00000487461 EMC8O43402 210 aa10.97□□□□□ -0.65
VPS16-208ENST00000487461 AKAP10O43572 662 aa10.97□□□□□ -0.65
VPS16-208ENST00000487461 AQP8O94778 261 aa10.97□□□□□ -0.65
VPS16-208ENST00000487461 NKX2-2O95096 273 aa10.97□□□□□ -0.65
VPS16-208ENST00000487461 IFI6P09912 130 aa10.97□□□□□ -0.65
VPS16-208ENST00000487461 POU2F1P14859 743 aa10.97□□□□□ -0.65
VPS16-208ENST00000487461 UGT2B10P36537 528 aa10.97□□□□□ -0.65
VPS16-208ENST00000487461 PRKAG1P54619 331 aa10.97□□□□□ -0.65
VPS16-208ENST00000487461 PSMD4P55036 377 aaKnown RBP10.97□□□□□ -0.65
VPS16-208ENST00000487461 NKX6-1P78426 367 aaPredicted RBP10.97□□□□□ -0.65
VPS16-208ENST00000487461 C17orf67Q0P5P2 114 aa10.97□□□□□ -0.65
VPS16-208ENST00000487461 HSPB3Q12988 150 aa10.97□□□□□ -0.65
VPS16-208ENST00000487461 PON3Q15166 354 aa10.97□□□□□ -0.65
VPS16-208ENST00000487461 GUSBP1Q15486 140 aa10.97□□□□□ -0.65
VPS16-208ENST00000487461 ZNF385BQ569K4 471 aa10.97□□□□□ -0.65
VPS16-208ENST00000487461 C22orf34Q6ZV56 151 aa10.97□□□□□ -0.65
VPS16-208ENST00000487461 CNPY4Q8N129 248 aa10.97□□□□□ -0.65
VPS16-208ENST00000487461 METTL25Q8N6Q8 603 aa10.97□□□□□ -0.65
VPS16-208ENST00000487461 CCDC63Q8NA47 563 aa10.97□□□□□ -0.65
VPS16-208ENST00000487461 LRRN4CLQ8ND94 238 aa10.97□□□□□ -0.65
VPS16-208ENST00000487461 OR4C3Q8NH37 302 aa10.97□□□□□ -0.65
VPS16-208ENST00000487461 GPR151Q8TDV0 419 aa10.97□□□□□ -0.65
VPS16-208ENST00000487461 GIMAP5Q96F15 307 aa10.97□□□□□ -0.65
VPS16-208ENST00000487461 FCRL1Q96LA6 429 aa10.97□□□□□ -0.65
VPS16-208ENST00000487461 SLC39A3Q9BRY0 314 aa10.97□□□□□ -0.65
VPS16-208ENST00000487461 TBL1XR1Q9BZK7 514 aa10.97□□□□□ -0.65
VPS16-208ENST00000487461 TUBB1Q9H4B7 451 aa10.97□□□□□ -0.65
VPS16-208ENST00000487461 C1orf109Q9NX04 203 aa10.97□□□□□ -0.65
VPS16-208ENST00000487461 BAIAP2L1Q9UHR4 511 aa10.97□□□□□ -0.65
VPS16-208ENST00000487461 ZNF175Q9Y473 711 aa10.97□□□□□ -0.65
VPS16-208ENST00000487461 AP4B1Q9Y6B7 739 aa10.97□□□□□ -0.65
VPS16-208ENST00000487461 SMIM23A6NLE4 172 aa10.96□□□□□ -0.65
VPS16-208ENST00000487461 C16orf97H3BN30 126 aa10.96□□□□□ -0.65
VPS16-208ENST00000487461 AZIN1O14977 448 aa10.96□□□□□ -0.65
VPS16-208ENST00000487461 PDPK1O15530 556 aa10.96□□□□□ -0.65
VPS16-208ENST00000487461 RGS14O43566 566 aa10.96□□□□□ -0.65
VPS16-208ENST00000487461 KCNH1O95259 989 aa10.96□□□□□ -0.65
VPS16-208ENST00000487461 LINC00032P0C843 101 aa10.96□□□□□ -0.65
VPS16-208ENST00000487461 CD8BP10966 210 aa10.96□□□□□ -0.65
VPS16-208ENST00000487461 CRYGSP22914 178 aa10.96□□□□□ -0.65
VPS16-208ENST00000487461 CCKARP32238 428 aa10.96□□□□□ -0.65
VPS16-208ENST00000487461 SLC6A8P48029 635 aa10.96□□□□□ -0.65
VPS16-208ENST00000487461 RPS3AP61247 264 aaKnown RBP10.96□□□□□ -0.65
VPS16-208ENST00000487461 OCRLQ01968 901 aa10.96□□□□□ -0.65
VPS16-208ENST00000487461 SGCBQ16585 318 aa10.96□□□□□ -0.65
VPS16-208ENST00000487461 RFTN2Q52LD8 501 aaPredicted RBP10.96□□□□□ -0.65
VPS16-208ENST00000487461 LIPMQ5VYY2 423 aa10.96□□□□□ -0.65
VPS16-208ENST00000487461 ZNF550Q7Z398 422 aa10.96□□□□□ -0.65
VPS16-208ENST00000487461 ZAR1Q86SH2 424 aa10.96□□□□□ -0.65
VPS16-208ENST00000487461 GALNT10Q86SR1 603 aa10.96□□□□□ -0.65
VPS16-208ENST00000487461 GGNQ86UU5 652 aa10.96□□□□□ -0.65
VPS16-208ENST00000487461 TDRPQ86YL5 185 aa10.96□□□□□ -0.65
VPS16-208ENST00000487461 C10orf107Q8IVU9 208 aa10.96□□□□□ -0.65
VPS16-208ENST00000487461 NUP43Q8NFH3 380 aa10.96□□□□□ -0.65
VPS16-208ENST00000487461 CEP70Q8NHQ1 597 aa10.96□□□□□ -0.65
VPS16-208ENST00000487461 FAM110BQ8TC76 370 aa10.96□□□□□ -0.65
VPS16-208ENST00000487461 ZNF764Q96H86 408 aaPredicted RBP10.96□□□□□ -0.65
VPS16-208ENST00000487461 NPAS1Q99742 590 aa10.96□□□□□ -0.65
VPS16-208ENST00000487461 MED18Q9BUE0 208 aa10.96□□□□□ -0.65
VPS16-208ENST00000487461 GATA5Q9BWX5 397 aaPredicted RBP10.96□□□□□ -0.65
VPS16-208ENST00000487461 REEP4Q9H6H4 257 aa10.96□□□□□ -0.65
VPS16-208ENST00000487461 FBXO34Q9NWN3 711 aa10.96□□□□□ -0.65
VPS16-208ENST00000487461 ZNF226Q9NYT6 803 aa10.96□□□□□ -0.65
VPS16-208ENST00000487461 SH3BP4Q9P0V3 963 aa10.96□□□□□ -0.65
VPS16-208ENST00000487461 NTMQ9P121 344 aa10.96□□□□□ -0.65
VPS16-208ENST00000487461 VDAC3Q9Y277 283 aa10.96□□□□□ -0.65
VPS16-208ENST00000487461 FIS1Q9Y3D6 152 aa10.96□□□□□ -0.65
VPS16-208ENST00000487461 ARID1AO14497 2285 aa10.95□□□□□ -0.66
VPS16-208ENST00000487461 ALG1L2C9J202 215 aa10.95□□□□□ -0.66
VPS16-208ENST00000487461 COPEO14579 308 aa10.95□□□□□ -0.66
VPS16-208ENST00000487461 TBX19O60806 448 aa10.95□□□□□ -0.66
VPS16-208ENST00000487461 KCNK2O95069 426 aa10.95□□□□□ -0.66
VPS16-208ENST00000487461 OPN1LWP04000 364 aa10.95□□□□□ -0.66
VPS16-208ENST00000487461 ACP2P11117 423 aa10.95□□□□□ -0.66
VPS16-208ENST00000487461 SDC1P18827 310 aa10.95□□□□□ -0.66
VPS16-208ENST00000487461 KRT4P19013 534 aa10.95□□□□□ -0.66
VPS16-208ENST00000487461 TBXA2RP21731 343 aa10.95□□□□□ -0.66
VPS16-208ENST00000487461 GPC1P35052 558 aa10.95□□□□□ -0.66
VPS16-208ENST00000487461 FRKP42685 505 aaPredicted RBP10.95□□□□□ -0.66
VPS16-208ENST00000487461 KCNJ5P48544 419 aa10.95□□□□□ -0.66
VPS16-208ENST00000487461 MANFP55145 182 aaKnown RBP10.95□□□□□ -0.66
VPS16-208ENST00000487461 SLC18A2Q05940 514 aa10.95□□□□□ -0.66
VPS16-208ENST00000487461 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.95□□□□□ -0.66
VPS16-208ENST00000487461 SHEQ5VZ18 495 aa10.95□□□□□ -0.66
VPS16-208ENST00000487461 ANKRD34AQ69YU3 496 aa10.95□□□□□ -0.66
VPS16-208ENST00000487461 FIGNL1Q6PIW4 674 aa10.95□□□□□ -0.66
VPS16-208ENST00000487461 Q71RC1 249 aaPredicted RBP10.95□□□□□ -0.66
VPS16-208ENST00000487461 FAM214BQ7L5A3 538 aa10.95□□□□□ -0.66
VPS16-208ENST00000487461 BIVMQ86UB2 503 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms