RNA–Protein interactions for RNA: ENST00000487252.1

TRIM56-204, Transcript of tripartite motif containing 56, humanhuman

TSL 3

Gene TRIM56, Length 735 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-204ENST00000487252 SERPINB8P50452 374 aa10.34□□□□□ -0.75
TRIM56-204ENST00000487252 DVL1P1P54792 670 aaPredicted RBP10.34□□□□□ -0.75
TRIM56-204ENST00000487252 NRG3P56975 720 aa10.34□□□□□ -0.75
TRIM56-204ENST00000487252 RPS13P62277 151 aaKnown RBP10.34□□□□□ -0.75
TRIM56-204ENST00000487252 SCGB2A2Q13296 93 aa10.34□□□□□ -0.75
TRIM56-204ENST00000487252 DOC2AQ14183 400 aa10.34□□□□□ -0.75
TRIM56-204ENST00000487252 ZNF267Q14586 743 aaPredicted RBP10.34□□□□□ -0.75
TRIM56-204ENST00000487252 CHI3L2Q15782 390 aa10.34□□□□□ -0.75
TRIM56-204ENST00000487252 SNCBQ16143 134 aa10.34□□□□□ -0.75
TRIM56-204ENST00000487252 LRRC8EQ6NSJ5 796 aa10.34□□□□□ -0.75
TRIM56-204ENST00000487252 CES3Q6UWW8 571 aa10.34□□□□□ -0.75
TRIM56-204ENST00000487252 RINLQ6ZS11 566 aa10.34□□□□□ -0.75
TRIM56-204ENST00000487252 NUP54Q7Z3B4 507 aa10.34□□□□□ -0.75
TRIM56-204ENST00000487252 VN1R5Q7Z5H4 357 aa10.34□□□□□ -0.75
TRIM56-204ENST00000487252 LCA5Q86VQ0 697 aa10.34□□□□□ -0.75
TRIM56-204ENST00000487252 UBQLNLQ8IYU4 475 aa10.34□□□□□ -0.75
TRIM56-204ENST00000487252 METTL25Q8N6Q8 603 aa10.34□□□□□ -0.75
TRIM56-204ENST00000487252 LINC01356Q8N9X3 169 aa10.34□□□□□ -0.75
TRIM56-204ENST00000487252 TTLQ8NG68 377 aa10.34□□□□□ -0.75
TRIM56-204ENST00000487252 DOK4Q8TEW6 326 aa10.34□□□□□ -0.75
TRIM56-204ENST00000487252 HPS1Q92902 700 aa10.34□□□□□ -0.75
TRIM56-204ENST00000487252 FBXL8Q96CD0 374 aa10.34□□□□□ -0.75
TRIM56-204ENST00000487252 SLC7A6OSQ96CW6 309 aaPredicted RBP10.34□□□□□ -0.75
TRIM56-204ENST00000487252 MFSD3Q96ES6 412 aa10.34□□□□□ -0.75
TRIM56-204ENST00000487252 RADILQ96JH8 1075 aa10.34□□□□□ -0.75
TRIM56-204ENST00000487252 JMJD8Q96S16 334 aa10.34□□□□□ -0.75
TRIM56-204ENST00000487252 NDNQ99608 321 aa10.34□□□□□ -0.75
TRIM56-204ENST00000487252 MECRQ9BV79 373 aa10.34□□□□□ -0.75
TRIM56-204ENST00000487252 TMEM120AQ9BXJ8 343 aa10.34□□□□□ -0.75
TRIM56-204ENST00000487252 THAP1Q9NVV9 213 aa10.34□□□□□ -0.75
TRIM56-204ENST00000487252 LOC390937A0A1W2PQ73 354 aa10.33□□□□□ -0.76
TRIM56-204ENST00000487252 RGS9O75916 674 aaPredicted RBP10.33□□□□□ -0.76
TRIM56-204ENST00000487252 HAUS5O94927 633 aa10.33□□□□□ -0.76
TRIM56-204ENST00000487252 ATP6V1G2O95670 118 aa10.33□□□□□ -0.76
TRIM56-204ENST00000487252 KRT16P08779 473 aa10.33□□□□□ -0.76
TRIM56-204ENST00000487252 NEFHP12036 1026 aa10.33□□□□□ -0.76
TRIM56-204ENST00000487252 ALOX15P16050 662 aaPredicted RBP10.33□□□□□ -0.76
TRIM56-204ENST00000487252 GRK2P25098 689 aa10.33□□□□□ -0.76
TRIM56-204ENST00000487252 IL2RGP31785 369 aa10.33□□□□□ -0.76
TRIM56-204ENST00000487252 GALNSP34059 522 aa10.33□□□□□ -0.76
TRIM56-204ENST00000487252 CDH15P55291 814 aa10.33□□□□□ -0.76
TRIM56-204ENST00000487252 STX3Q13277 289 aa10.33□□□□□ -0.76
TRIM56-204ENST00000487252 PCLAFQ15004 111 aa10.33□□□□□ -0.76
TRIM56-204ENST00000487252 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.33□□□□□ -0.76
TRIM56-204ENST00000487252 CCDC153Q494R4 210 aa10.33□□□□□ -0.76
TRIM56-204ENST00000487252 SFRP5Q5T4F7 317 aa10.33□□□□□ -0.76
TRIM56-204ENST00000487252 UBE3DQ7Z6J8 389 aa10.33□□□□□ -0.76
TRIM56-204ENST00000487252 TMPRSS11BQ86T26 416 aa10.33□□□□□ -0.76
TRIM56-204ENST00000487252 MTDHQ86UE4 582 aaKnown RBP10.33□□□□□ -0.76
TRIM56-204ENST00000487252 PRR22Q8IZ63 422 aa10.33□□□□□ -0.76
TRIM56-204ENST00000487252 EEF1AKMT1Q8WVE0 214 aa10.33□□□□□ -0.76
TRIM56-204ENST00000487252 UTP4Q969X6 686 aaKnown RBP10.33□□□□□ -0.76
TRIM56-204ENST00000487252 PTCD3Q96EY7 689 aaKnown RBP10.33□□□□□ -0.76
TRIM56-204ENST00000487252 RAB3IPQ96QF0 476 aaPredicted RBP10.33□□□□□ -0.76
TRIM56-204ENST00000487252 GPR22Q99680 433 aa10.33□□□□□ -0.76
TRIM56-204ENST00000487252 USB1Q9BQ65 265 aaKnown RBP10.33□□□□□ -0.76
TRIM56-204ENST00000487252 TXNDC16Q9P2K2 825 aa10.33□□□□□ -0.76
TRIM56-204ENST00000487252 DCTN4Q9UJW0 460 aa10.33□□□□□ -0.76
TRIM56-204ENST00000487252 ING1Q9UK53 422 aaPredicted RBP10.33□□□□□ -0.76
TRIM56-204ENST00000487252 TRIM33Q9UPN9 1127 aa10.33□□□□□ -0.76
TRIM56-204ENST00000487252 PTGDR2Q9Y5Y4 395 aa10.33□□□□□ -0.76
TRIM56-204ENST00000487252 A0A0G2JND7 137 aa10.32□□□□□ -0.76
TRIM56-204ENST00000487252 LRP5LA4QPB2 252 aa10.32□□□□□ -0.76
TRIM56-204ENST00000487252 ABCD4O14678 606 aa10.32□□□□□ -0.76
TRIM56-204ENST00000487252 SCELO95171 688 aa10.32□□□□□ -0.76
TRIM56-204ENST00000487252 SERPINE1P05121 402 aa10.32□□□□□ -0.76
TRIM56-204ENST00000487252 TACSTD2P09758 323 aa10.32□□□□□ -0.76
TRIM56-204ENST00000487252 PCMT1P22061 227 aa10.32□□□□□ -0.76
TRIM56-204ENST00000487252 ZFP36P26651 326 aaKnown RBP10.32□□□□□ -0.76
TRIM56-204ENST00000487252 TYK2P29597 1187 aa10.32□□□□□ -0.76
TRIM56-204ENST00000487252 SLC6A8P48029 635 aa10.32□□□□□ -0.76
TRIM56-204ENST00000487252 RASSF2P50749 326 aa10.32□□□□□ -0.76
TRIM56-204ENST00000487252 AP1S2P56377 157 aa10.32□□□□□ -0.76
TRIM56-204ENST00000487252 CLDN20P56880 219 aa10.32□□□□□ -0.76
TRIM56-204ENST00000487252 TIAL1Q01085 375 aaKnown RBP eCLIP10.32□□□□□ -0.76
TRIM56-204ENST00000487252 HMGCS1Q01581 520 aa10.32□□□□□ -0.76
TRIM56-204ENST00000487252 TSC22D1Q15714 1073 aa10.32□□□□□ -0.76
TRIM56-204ENST00000487252 TMIGD1Q6UXZ0 262 aa10.32□□□□□ -0.76
TRIM56-204ENST00000487252 CCDC91Q7Z6B0 441 aa10.32□□□□□ -0.76
TRIM56-204ENST00000487252 STK32CQ86UX6 486 aa10.32□□□□□ -0.76
TRIM56-204ENST00000487252 ZC3HC1Q86WB0 502 aaKnown RBP10.32□□□□□ -0.76
TRIM56-204ENST00000487252 FBXL14Q8N1E6 418 aa10.32□□□□□ -0.76
TRIM56-204ENST00000487252 ZNF619Q8N2I2 560 aa10.32□□□□□ -0.76
TRIM56-204ENST00000487252 ZNF615Q8N8J6 731 aa10.32□□□□□ -0.76
TRIM56-204ENST00000487252 KCTD4Q8WVF5 259 aa10.32□□□□□ -0.76
TRIM56-204ENST00000487252 RIT1Q92963 219 aa10.32□□□□□ -0.76
TRIM56-204ENST00000487252 PELOQ9BRX2 385 aaKnown RBP10.32□□□□□ -0.76
TRIM56-204ENST00000487252 POTEKPQ9BYX7 375 aa10.32□□□□□ -0.76
TRIM56-204ENST00000487252 BPESC1Q9GZL8 116 aa10.32□□□□□ -0.76
TRIM56-204ENST00000487252 C20orf27Q9GZN8 174 aa10.32□□□□□ -0.76
TRIM56-204ENST00000487252 RHOJQ9H4E5 214 aa10.32□□□□□ -0.76
TRIM56-204ENST00000487252 NT5DC2Q9H857 520 aa10.32□□□□□ -0.76
TRIM56-204ENST00000487252 COPS7BQ9H9Q2 264 aaPredicted RBP10.32□□□□□ -0.76
TRIM56-204ENST00000487252 ESM1Q9NQ30 184 aa10.32□□□□□ -0.76
TRIM56-204ENST00000487252 C20orf96Q9NUD7 363 aaPredicted RBP10.32□□□□□ -0.76
TRIM56-204ENST00000487252 TMEM216Q9P0N5 145 aa10.32□□□□□ -0.76
TRIM56-204ENST00000487252 SPEF1Q9Y4P9 236 aa10.32□□□□□ -0.76
TRIM56-204ENST00000487252 PRAMEF25A6NGN4 478 aa10.31□□□□□ -0.76
TRIM56-204ENST00000487252 HIST1H2AGP0C0S8 130 aaPredicted RBP10.31□□□□□ -0.76
TRIM56-204ENST00000487252 MYL2P10916 166 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 118.5 ms