RNA–Protein interactions for RNA: ENST00000487062.1

SF3A3-206, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 775 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-206ENST00000487062 TOP3AQ13472 1001 aaPredicted RBP6.53□□□□□ -1.36
SF3A3-206ENST00000487062 DGCR6Q14129 220 aa6.53□□□□□ -1.36
SF3A3-206ENST00000487062 KEAP1Q14145 624 aa6.53□□□□□ -1.36
SF3A3-206ENST00000487062 LAPTM4AQ15012 233 aa6.53□□□□□ -1.36
SF3A3-206ENST00000487062 TRAM2Q15035 370 aa6.53□□□□□ -1.36
SF3A3-206ENST00000487062 SF3A2Q15428 464 aaKnown RBP6.53□□□□□ -1.36
SF3A3-206ENST00000487062 DECR1Q16698 335 aa6.53□□□□□ -1.36
SF3A3-206ENST00000487062 RNF220Q5VTB9 566 aa6.53□□□□□ -1.36
SF3A3-206ENST00000487062 FIGNL1Q6PIW4 674 aa6.53□□□□□ -1.36
SF3A3-206ENST00000487062 PLEKHM3Q6ZWE6 761 aa6.53□□□□□ -1.36
SF3A3-206ENST00000487062 COX15Q7KZN9 410 aa6.53□□□□□ -1.36
SF3A3-206ENST00000487062 RRM2BQ7LG56 351 aa6.53□□□□□ -1.36
SF3A3-206ENST00000487062 SLC29A4Q7RTT9 530 aa6.53□□□□□ -1.36
SF3A3-206ENST00000487062 THAP5Q7Z6K1 395 aa6.53□□□□□ -1.36
SF3A3-206ENST00000487062 GALNT5Q7Z7M9 940 aa6.53□□□□□ -1.36
SF3A3-206ENST00000487062 HMGN2P46Q86SG4 172 aa6.53□□□□□ -1.36
SF3A3-206ENST00000487062 RBM45Q8IUH3 476 aaKnown RBP6.53□□□□□ -1.36
SF3A3-206ENST00000487062 LACC1Q8IV20 430 aa6.53□□□□□ -1.36
SF3A3-206ENST00000487062 APLFQ8IW19 511 aaPredicted RBP6.53□□□□□ -1.36
SF3A3-206ENST00000487062 NAXDQ8IW45 347 aa6.53□□□□□ -1.36
SF3A3-206ENST00000487062 PRSS58Q8IYP2 241 aa6.53□□□□□ -1.36
SF3A3-206ENST00000487062 ALDH16A1Q8IZ83 802 aa6.53□□□□□ -1.36
SF3A3-206ENST00000487062 OFCC1Q8IZS5 231 aa6.53□□□□□ -1.36
SF3A3-206ENST00000487062 ZNF786Q8N393 782 aa6.53□□□□□ -1.36
SF3A3-206ENST00000487062 SLC5A8Q8N695 610 aa6.53□□□□□ -1.36
SF3A3-206ENST00000487062 TOR1AIP2Q8NFQ8 470 aa6.53□□□□□ -1.36
SF3A3-206ENST00000487062 OR4D11Q8NGI4 311 aa6.53□□□□□ -1.36
SF3A3-206ENST00000487062 OR6T1Q8NGN1 323 aa6.53□□□□□ -1.36
SF3A3-206ENST00000487062 SLC2A12Q8TD20 617 aa6.53□□□□□ -1.36
SF3A3-206ENST00000487062 PTPMT1Q8WUK0 201 aaPredicted RBP6.53□□□□□ -1.36
SF3A3-206ENST00000487062 ATOH1Q92858 354 aaPredicted RBP6.53□□□□□ -1.36
SF3A3-206ENST00000487062 SLC38A4Q969I6 547 aa6.53□□□□□ -1.36
SF3A3-206ENST00000487062 SLC35B4Q969S0 331 aa6.53□□□□□ -1.36
SF3A3-206ENST00000487062 ZG16BQ96DA0 208 aa6.53□□□□□ -1.36
SF3A3-206ENST00000487062 MBOAT4Q96T53 435 aa6.53□□□□□ -1.36
SF3A3-206ENST00000487062 FEVQ99581 238 aa6.53□□□□□ -1.36
SF3A3-206ENST00000487062 MCHR1Q99705 422 aa6.53□□□□□ -1.36
SF3A3-206ENST00000487062 BARD1Q99728 777 aaKnown RBP6.53□□□□□ -1.36
SF3A3-206ENST00000487062 CMKLR1Q99788 373 aa6.53□□□□□ -1.36
SF3A3-206ENST00000487062 PRRX2Q99811 253 aa6.53□□□□□ -1.36
SF3A3-206ENST00000487062 APOL4Q9BPW4 351 aa6.53□□□□□ -1.36
SF3A3-206ENST00000487062 EDEM2Q9BV94 578 aa6.53□□□□□ -1.36
SF3A3-206ENST00000487062 ITPAQ9BY32 194 aa6.53□□□□□ -1.36
SF3A3-206ENST00000487062 MRPS26Q9BYN8 205 aaKnown RBP6.53□□□□□ -1.36
SF3A3-206ENST00000487062 OR8D2Q9GZM6 311 aa6.53□□□□□ -1.36
SF3A3-206ENST00000487062 HOXD1Q9GZZ0 328 aa6.53□□□□□ -1.36
SF3A3-206ENST00000487062 ANKRD19PQ9H560 264 aa6.53□□□□□ -1.36
SF3A3-206ENST00000487062 C12orf49Q9H741 205 aa6.53□□□□□ -1.36
SF3A3-206ENST00000487062 ZNF696Q9H7X3 374 aa6.53□□□□□ -1.36
SF3A3-206ENST00000487062 PAPOLBQ9NRJ5 636 aaKnown RBP6.53□□□□□ -1.36
SF3A3-206ENST00000487062 RXFP3Q9NSD7 469 aa6.53□□□□□ -1.36
SF3A3-206ENST00000487062 OCIAD1Q9NX40 245 aa6.53□□□□□ -1.36
SF3A3-206ENST00000487062 RHCGQ9UBD6 479 aa6.53□□□□□ -1.36
SF3A3-206ENST00000487062 CTSFQ9UBX1 484 aa6.53□□□□□ -1.36
SF3A3-206ENST00000487062 C19orf25Q9UFG5 118 aaPredicted RBP6.53□□□□□ -1.36
SF3A3-206ENST00000487062 NXT1Q9UKK6 140 aaKnown RBP6.53□□□□□ -1.36
SF3A3-206ENST00000487062 A4GNTQ9UNA3 340 aa6.53□□□□□ -1.36
SF3A3-206ENST00000487062 GPR55Q9Y2T6 319 aaPredicted RBP6.53□□□□□ -1.36
SF3A3-206ENST00000487062 GMPPBQ9Y5P6 360 aa6.53□□□□□ -1.36
SF3A3-206ENST00000487062 HSPE1-MOB4S4R3N1 261 aa6.53□□□□□ -1.36
SF3A3-206ENST00000487062 NCOR1O75376 2440 aa6.52□□□□□ -1.36
SF3A3-206ENST00000487062 BDP1A6H8Y1 2624 aa6.52□□□□□ -1.37
SF3A3-206ENST00000487062 COL27A1Q8IZC6 1860 aaPredicted RBP6.52□□□□□ -1.37
SF3A3-206ENST00000487062 C2orf92A0A1B0GVN3 265 aa6.52□□□□□ -1.37
SF3A3-206ENST00000487062 SH3PXD2BA1X283 911 aa6.52□□□□□ -1.37
SF3A3-206ENST00000487062 CDHR4A6H8M9 788 aa6.52□□□□□ -1.37
SF3A3-206ENST00000487062 FRG2CA6NGY1 282 aa6.52□□□□□ -1.37
SF3A3-206ENST00000487062 VSTM2BA6NLU5 285 aa6.52□□□□□ -1.37
SF3A3-206ENST00000487062 EIF4E1BA6NMX2 242 aaKnown RBP6.52□□□□□ -1.37
SF3A3-206ENST00000487062 IDSB3KWA1 339 aa6.52□□□□□ -1.37
SF3A3-206ENST00000487062 C9J4A7 227 aa6.52□□□□□ -1.37
SF3A3-206ENST00000487062 H3BNH8 94 aa6.52□□□□□ -1.37
SF3A3-206ENST00000487062 TNFRSF10AO00220 468 aa6.52□□□□□ -1.37
SF3A3-206ENST00000487062 AGRPO00253 132 aa6.52□□□□□ -1.37
SF3A3-206ENST00000487062 MEN1O00255 615 aa6.52□□□□□ -1.37
SF3A3-206ENST00000487062 CDX4O14627 284 aaPredicted RBP6.52□□□□□ -1.37
SF3A3-206ENST00000487062 FFAR1O14842 300 aa6.52□□□□□ -1.37
SF3A3-206ENST00000487062 OR10H3O60404 316 aa6.52□□□□□ -1.37
SF3A3-206ENST00000487062 FMO6PO60774 539 aa6.52□□□□□ -1.37
SF3A3-206ENST00000487062 MITFO75030 526 aaPredicted RBP6.52□□□□□ -1.37
SF3A3-206ENST00000487062 LRP3O75074 770 aa6.52□□□□□ -1.37
SF3A3-206ENST00000487062 ALOX12BO75342 701 aa6.52□□□□□ -1.37
SF3A3-206ENST00000487062 RFPL3O75679 317 aa6.52□□□□□ -1.37
SF3A3-206ENST00000487062 CYP7B1O75881 506 aa6.52□□□□□ -1.37
SF3A3-206ENST00000487062 TIAF1O95411 115 aa6.52□□□□□ -1.37
SF3A3-206ENST00000487062 DDAH2O95865 285 aa6.52□□□□□ -1.37
SF3A3-206ENST00000487062 EPPINO95925 133 aa6.52□□□□□ -1.37
SF3A3-206ENST00000487062 ADAP00813 363 aa6.52□□□□□ -1.37
SF3A3-206ENST00000487062 CLPSP04118 112 aa6.52□□□□□ -1.37
SF3A3-206ENST00000487062 IGKV3-11P04433 115 aa6.52□□□□□ -1.37
SF3A3-206ENST00000487062 CD63P08962 238 aa6.52□□□□□ -1.37
SF3A3-206ENST00000487062 CT45A8P0DMV1 189 aa6.52□□□□□ -1.37
SF3A3-206ENST00000487062 CT45A9P0DMV2 189 aa6.52□□□□□ -1.37
SF3A3-206ENST00000487062 CD59P13987 128 aa6.52□□□□□ -1.37
SF3A3-206ENST00000487062 DRD5P21918 477 aa6.52□□□□□ -1.37
SF3A3-206ENST00000487062 CBLP22681 906 aa6.52□□□□□ -1.37
SF3A3-206ENST00000487062 RYKP34925 604 aa6.52□□□□□ -1.37
SF3A3-206ENST00000487062 KRT20P35900 424 aa6.52□□□□□ -1.37
SF3A3-206ENST00000487062 ST13P50502 369 aaKnown RBP6.52□□□□□ -1.37
SF3A3-206ENST00000487062 ATP12AP54707 1039 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms