RNA–Protein interactions for RNA: ENST00000487043.5

PTCD3-216, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 1,054 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-216ENST00000487043 CPXM1Q96SM3 734 aa3.51□□□□□ -1.85
PTCD3-216ENST00000487043 PKMYT1Q99640 499 aa3.51□□□□□ -1.85
PTCD3-216ENST00000487043 EPYCQ99645 322 aa3.51□□□□□ -1.85
PTCD3-216ENST00000487043 NAPGQ99747 312 aaPredicted RBP3.51□□□□□ -1.85
PTCD3-216ENST00000487043 SYT15Q9BQS2 421 aa3.51□□□□□ -1.85
PTCD3-216ENST00000487043 C11orf70Q9BRQ4 267 aa3.51□□□□□ -1.85
PTCD3-216ENST00000487043 CCM2Q9BSQ5 444 aa3.51□□□□□ -1.85
PTCD3-216ENST00000487043 WACQ9BTA9 647 aa3.51□□□□□ -1.85
PTCD3-216ENST00000487043 NUSAP1Q9BXS6 441 aaKnown RBP3.51□□□□□ -1.85
PTCD3-216ENST00000487043 DUSP16Q9BY84 665 aa3.51□□□□□ -1.85
PTCD3-216ENST00000487043 TMEM231Q9H6L2 316 aa3.51□□□□□ -1.85
PTCD3-216ENST00000487043 VIPAS39Q9H9C1 493 aa3.51□□□□□ -1.85
PTCD3-216ENST00000487043 ZNF334Q9HCZ1 680 aaPredicted RBP3.51□□□□□ -1.85
PTCD3-216ENST00000487043 MRPL47Q9HD33 250 aaKnown RBP3.51□□□□□ -1.85
PTCD3-216ENST00000487043 SLC52A3Q9NQ40 469 aa3.51□□□□□ -1.85
PTCD3-216ENST00000487043 MAN2C1Q9NTJ4 1040 aa3.51□□□□□ -1.85
PTCD3-216ENST00000487043 FAM49BQ9NUQ9 324 aa3.51□□□□□ -1.85
PTCD3-216ENST00000487043 PARVAQ9NVD7 372 aa3.51□□□□□ -1.85
PTCD3-216ENST00000487043 MARCH5Q9NX47 278 aa3.51□□□□□ -1.85
PTCD3-216ENST00000487043 ZNF624Q9P2J8 865 aaPredicted RBP3.51□□□□□ -1.85
PTCD3-216ENST00000487043 ANKMY1Q9P2S6 941 aa3.51□□□□□ -1.85
PTCD3-216ENST00000487043 UVRAGQ9P2Y5 699 aa3.51□□□□□ -1.85
PTCD3-216ENST00000487043 CYTH4Q9UIA0 394 aa3.51□□□□□ -1.85
PTCD3-216ENST00000487043 LCMT1Q9UIC8 334 aa3.51□□□□□ -1.85
PTCD3-216ENST00000487043 ADAM28Q9UKQ2 775 aa3.51□□□□□ -1.85
PTCD3-216ENST00000487043 PRG3Q9Y2Y8 225 aaPredicted RBP3.51□□□□□ -1.85
PTCD3-216ENST00000487043 MRPS2Q9Y399 296 aaKnown RBP3.51□□□□□ -1.85
PTCD3-216ENST00000487043 ALG6Q9Y672 507 aa3.51□□□□□ -1.85
PTCD3-216ENST00000487043 SELENOKQ9Y6D0 94 aa3.51□□□□□ -1.85
PTCD3-216ENST00000487043 LTBP2Q14767 1821 aa3.51□□□□□ -1.85
PTCD3-216ENST00000487043 SF3B1O75533 1304 aaKnown RBP eCLIP3.5□□□□□ -1.857e-9■■□□□ 13.5
PTCD3-216ENST00000487043 FAM172BPA6NC97 362 aa3.5□□□□□ -1.85
PTCD3-216ENST00000487043 SERINC4A6NH21 518 aa3.5□□□□□ -1.85
PTCD3-216ENST00000487043 MSGN1A6NI15 193 aa3.5□□□□□ -1.85
PTCD3-216ENST00000487043 SRRM4A7MD48 611 aaKnown RBP3.5□□□□□ -1.85
PTCD3-216ENST00000487043 M0QYV0 167 aa3.5□□□□□ -1.85
PTCD3-216ENST00000487043 SLC1A7O00341 560 aa3.5□□□□□ -1.85
PTCD3-216ENST00000487043 ZNF195O14628 629 aa3.5□□□□□ -1.85
PTCD3-216ENST00000487043 XPO1O14980 1071 aaKnown RBP3.5□□□□□ -1.85
PTCD3-216ENST00000487043 GRID2O43424 1007 aa3.5□□□□□ -1.85
PTCD3-216ENST00000487043 PEX11AO75192 247 aa3.5□□□□□ -1.85
PTCD3-216ENST00000487043 LRCH4O75427 683 aa3.5□□□□□ -1.85
PTCD3-216ENST00000487043 SCGB2A1O75556 95 aa3.5□□□□□ -1.85
PTCD3-216ENST00000487043 GJB5O95377 273 aa3.5□□□□□ -1.85
PTCD3-216ENST00000487043 SYNGR4O95473 234 aa3.5□□□□□ -1.85
PTCD3-216ENST00000487043 NADKO95544 446 aaPredicted RBP3.5□□□□□ -1.85
PTCD3-216ENST00000487043 PAK4O96013 591 aaPredicted RBP3.5□□□□□ -1.85
PTCD3-216ENST00000487043 HMBSP08397 361 aa3.5□□□□□ -1.85
PTCD3-216ENST00000487043 ZCCHC18P0CG32 403 aa3.5□□□□□ -1.85
PTCD3-216ENST00000487043 CT45A8P0DMV1 189 aa3.5□□□□□ -1.85
PTCD3-216ENST00000487043 CT45A9P0DMV2 189 aa3.5□□□□□ -1.85
PTCD3-216ENST00000487043 CEACAM1P13688 526 aa3.5□□□□□ -1.85
PTCD3-216ENST00000487043 CCDC130P13994 396 aa3.5□□□□□ -1.85
PTCD3-216ENST00000487043 NCF1P14598 390 aaPredicted RBP3.5□□□□□ -1.85
PTCD3-216ENST00000487043 GPX3P22352 226 aa3.5□□□□□ -1.85
PTCD3-216ENST00000487043 ADORA2BP29275 332 aa3.5□□□□□ -1.85
PTCD3-216ENST00000487043 FEN1P39748 380 aaKnown RBP3.5□□□□□ -1.85
PTCD3-216ENST00000487043 SLC1A1P43005 524 aa3.5□□□□□ -1.85
PTCD3-216ENST00000487043 ACADSBP45954 432 aa3.5□□□□□ -1.85
PTCD3-216ENST00000487043 CCL11P51671 97 aa3.5□□□□□ -1.85
PTCD3-216ENST00000487043 MTTPP55157 894 aa3.5□□□□□ -1.85
PTCD3-216ENST00000487043 SLC8A3P57103 927 aa3.5□□□□□ -1.85
PTCD3-216ENST00000487043 KRTAP10-6P60371 365 aaPredicted RBP3.5□□□□□ -1.85
PTCD3-216ENST00000487043 GABPB1Q06547 395 aaPredicted RBP3.5□□□□□ -1.85
PTCD3-216ENST00000487043 BST2Q10589 180 aaKnown RBP3.5□□□□□ -1.85
PTCD3-216ENST00000487043 SMARCB1Q12824 385 aa3.5□□□□□ -1.85
PTCD3-216ENST00000487043 SRSF9Q13242 221 aaKnown RBP eCLIP3.5□□□□□ -1.85
PTCD3-216ENST00000487043 BTG3Q14201 252 aaPredicted RBP3.5□□□□□ -1.85
PTCD3-216ENST00000487043 TRADDQ15628 312 aa3.5□□□□□ -1.85
PTCD3-216ENST00000487043 C3AR1Q16581 482 aa3.5□□□□□ -1.85
PTCD3-216ENST00000487043 WSCD2Q2TBF2 565 aa3.5□□□□□ -1.85
PTCD3-216ENST00000487043 ZNF718Q3SXZ3 478 aa3.5□□□□□ -1.85
PTCD3-216ENST00000487043 ZNF672Q499Z4 452 aaPredicted RBP3.5□□□□□ -1.85
PTCD3-216ENST00000487043 CFAP221Q4G0U5 840 aa3.5□□□□□ -1.85
PTCD3-216ENST00000487043 PTPN20Q4JDL3 420 aa3.5□□□□□ -1.85
PTCD3-216ENST00000487043 FAM106AQ4KMX7 169 aa3.5□□□□□ -1.85
PTCD3-216ENST00000487043 KLHL22Q53GT1 634 aa3.5□□□□□ -1.85
PTCD3-216ENST00000487043 C2CD6Q53TS8 623 aa3.5□□□□□ -1.85
PTCD3-216ENST00000487043 CT45A2Q5DJT8 189 aa3.5□□□□□ -1.85
PTCD3-216ENST00000487043 FFAR4Q5NUL3 377 aa3.5□□□□□ -1.85
PTCD3-216ENST00000487043 TEX35Q5T0J7 233 aa3.5□□□□□ -1.85
PTCD3-216ENST00000487043 SLC8B1Q6J4K2 584 aa3.5□□□□□ -1.85
PTCD3-216ENST00000487043 CAPN13Q6MZZ7 669 aaPredicted RBP3.5□□□□□ -1.85
PTCD3-216ENST00000487043 PMF1Q6P1K2 205 aa3.5□□□□□ -1.85
PTCD3-216ENST00000487043 CLEC20AQ6ZU45 233 aa3.5□□□□□ -1.85
PTCD3-216ENST00000487043 Q71RC1 249 aaPredicted RBP3.5□□□□□ -1.85
PTCD3-216ENST00000487043 ARCQ7LC44 396 aa3.5□□□□□ -1.85
PTCD3-216ENST00000487043 PEX26Q7Z412 305 aa3.5□□□□□ -1.85
PTCD3-216ENST00000487043 TMCO2Q7Z6W1 182 aaPredicted RBP3.5□□□□□ -1.85
PTCD3-216ENST00000487043 SMIM29Q86T20 159 aa3.5□□□□□ -1.85
PTCD3-216ENST00000487043 NT5DC3Q86UY8 548 aa3.5□□□□□ -1.85
PTCD3-216ENST00000487043 LACC1Q8IV20 430 aa3.5□□□□□ -1.85
PTCD3-216ENST00000487043 GPR65Q8IYL9 337 aa3.5□□□□□ -1.85
PTCD3-216ENST00000487043 SLC39A11Q8N1S5 342 aa3.5□□□□□ -1.85
PTCD3-216ENST00000487043 LRRC17Q8N6Y2 441 aa3.5□□□□□ -1.85
PTCD3-216ENST00000487043 OR10V1Q8NGI7 309 aa3.5□□□□□ -1.85
PTCD3-216ENST00000487043 OR10T2Q8NGX3 314 aa3.5□□□□□ -1.85
PTCD3-216ENST00000487043 ZNF564Q8TBZ8 553 aaPredicted RBP3.5□□□□□ -1.85
PTCD3-216ENST00000487043 ZNF524Q96C55 264 aa3.5□□□□□ -1.85
PTCD3-216ENST00000487043 OMA1Q96E52 524 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms