RNA–Protein interactions for RNA: ENST00000486941.1

SNRNP40-205, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-205ENST00000486941 CYHR1Q6ZMK1 362 aa3.66□□□□□ -1.82
SNRNP40-205ENST00000486941 LANCL3Q6ZV70 420 aa3.66□□□□□ -1.82
SNRNP40-205ENST00000486941 RNF144BQ7Z419 303 aa3.66□□□□□ -1.82
SNRNP40-205ENST00000486941 GALNTL5Q7Z4T8 443 aa3.66□□□□□ -1.82
SNRNP40-205ENST00000486941 VN1R4Q7Z5H5 301 aa3.66□□□□□ -1.82
SNRNP40-205ENST00000486941 ADCK2Q7Z695 626 aa3.66□□□□□ -1.82
SNRNP40-205ENST00000486941 ANKRD37Q7Z713 158 aa3.66□□□□□ -1.82
SNRNP40-205ENST00000486941 KIAA1328Q86T90 577 aa3.66□□□□□ -1.82
SNRNP40-205ENST00000486941 RPS19BP1Q86WX3 136 aaKnown RBP3.66□□□□□ -1.82
SNRNP40-205ENST00000486941 SLC13A5Q86YT5 568 aaPredicted RBP3.66□□□□□ -1.82
SNRNP40-205ENST00000486941 CRLF3Q8IUI8 442 aa3.66□□□□□ -1.82
SNRNP40-205ENST00000486941 PLD3Q8IV08 490 aa3.66□□□□□ -1.82
SNRNP40-205ENST00000486941 CHERPQ8IWX8 916 aaKnown RBP3.66□□□□□ -1.82
SNRNP40-205ENST00000486941 RNF10Q8N5U6 811 aaKnown RBP3.66□□□□□ -1.82
SNRNP40-205ENST00000486941 RFLNBQ8N5W9 214 aa3.66□□□□□ -1.82
SNRNP40-205ENST00000486941 SLC5A8Q8N695 610 aa3.66□□□□□ -1.82
SNRNP40-205ENST00000486941 CCDC89Q8N998 374 aa3.66□□□□□ -1.82
SNRNP40-205ENST00000486941 POGLUT1Q8NBL1 392 aa3.66□□□□□ -1.82
SNRNP40-205ENST00000486941 CAMKVQ8NCB2 501 aa3.66□□□□□ -1.82
SNRNP40-205ENST00000486941 PPFIBP2Q8ND30 876 aa3.66□□□□□ -1.82
SNRNP40-205ENST00000486941 OR9A4Q8NGU2 314 aa3.66□□□□□ -1.82
SNRNP40-205ENST00000486941 AGAP11Q8TF27 550 aa3.66□□□□□ -1.82
SNRNP40-205ENST00000486941 CA5BP1Q8WTZ4 195 aa3.66□□□□□ -1.82
SNRNP40-205ENST00000486941 FAM216AQ8WUB2 273 aa3.66□□□□□ -1.82
SNRNP40-205ENST00000486941 C1orf54Q8WWF1 131 aa3.66□□□□□ -1.82
SNRNP40-205ENST00000486941 ZNF566Q969W8 418 aa3.66□□□□□ -1.82
SNRNP40-205ENST00000486941 TM4SF19Q96DZ7 209 aa3.66□□□□□ -1.82
SNRNP40-205ENST00000486941 PRAP1Q96NZ9 151 aa3.66□□□□□ -1.82
SNRNP40-205ENST00000486941 OR1F2PQ96R84 312 aa3.66□□□□□ -1.82
SNRNP40-205ENST00000486941 LPAR4Q99677 370 aa3.66□□□□□ -1.82
SNRNP40-205ENST00000486941 NPAS1Q99742 590 aa3.66□□□□□ -1.82
SNRNP40-205ENST00000486941 NPAS2Q99743 824 aa3.66□□□□□ -1.82
SNRNP40-205ENST00000486941 OLFM1Q99784 485 aa3.66□□□□□ -1.82
SNRNP40-205ENST00000486941 TRIM51Q9BSJ1 452 aa3.66□□□□□ -1.82
SNRNP40-205ENST00000486941 TSGA10Q9BZW7 698 aa3.66□□□□□ -1.82
SNRNP40-205ENST00000486941 PCBD2Q9H0N5 130 aa3.66□□□□□ -1.82
SNRNP40-205ENST00000486941 TRIM45Q9H8W5 580 aaPredicted RBP3.66□□□□□ -1.82
SNRNP40-205ENST00000486941 ANKHQ9HCJ1 492 aa3.66□□□□□ -1.82
SNRNP40-205ENST00000486941 KLHL1Q9NR64 748 aa3.66□□□□□ -1.82
SNRNP40-205ENST00000486941 INTS10Q9NVR2 710 aaKnown RBP3.66□□□□□ -1.82
SNRNP40-205ENST00000486941 COQ3Q9NZJ6 369 aa3.66□□□□□ -1.82
SNRNP40-205ENST00000486941 LRFN1Q9P244 771 aa3.66□□□□□ -1.82
SNRNP40-205ENST00000486941 GALPQ9UBC7 116 aa3.66□□□□□ -1.82
SNRNP40-205ENST00000486941 CRYL1Q9Y2S2 319 aa3.66□□□□□ -1.82
SNRNP40-205ENST00000486941 RAP2CQ9Y3L5 183 aa3.66□□□□□ -1.82
SNRNP40-205ENST00000486941 SLC22A7Q9Y694 548 aa3.66□□□□□ -1.82
SNRNP40-205ENST00000486941 ARHGAP21Q5T5U3 1957 aa3.65□□□□□ -1.82
SNRNP40-205ENST00000486941 MAGEB16A2A368 324 aa3.65□□□□□ -1.83
SNRNP40-205ENST00000486941 GOLGA8KD6RF30 607 aa3.65□□□□□ -1.83
SNRNP40-205ENST00000486941 GOLGA8TH3BQL2 631 aa3.65□□□□□ -1.83
SNRNP40-205ENST00000486941 KLRC4-KLRK1H3BQV0 150 aa3.65□□□□□ -1.83
SNRNP40-205ENST00000486941 SGK494L7N484 410 aa3.65□□□□□ -1.83
SNRNP40-205ENST00000486941 BMPR1BO00238 502 aa3.65□□□□□ -1.83
SNRNP40-205ENST00000486941 EIF3FO00303 357 aaPredicted RBP3.65□□□□□ -1.83
SNRNP40-205ENST00000486941 NDC80O14777 642 aa3.65□□□□□ -1.83
SNRNP40-205ENST00000486941 NME2P1O60361 137 aa3.65□□□□□ -1.83
SNRNP40-205ENST00000486941 SLC25A12O75746 678 aa3.65□□□□□ -1.83
SNRNP40-205ENST00000486941 F7P08709 466 aaPredicted RBP3.65□□□□□ -1.83
SNRNP40-205ENST00000486941 ZSCAN5DPP0CG00 497 aa3.65□□□□□ -1.83
SNRNP40-205ENST00000486941 NPPBP16860 134 aa3.65□□□□□ -1.83
SNRNP40-205ENST00000486941 ZNF24P17028 368 aa3.65□□□□□ -1.83
SNRNP40-205ENST00000486941 IL1RNP18510 177 aa3.65□□□□□ -1.83
SNRNP40-205ENST00000486941 TPSB2P20231 275 aa3.65□□□□□ -1.83
SNRNP40-205ENST00000486941 JAK1P23458 1154 aa3.65□□□□□ -1.83
SNRNP40-205ENST00000486941 KRTAP5-9P26371 169 aa3.65□□□□□ -1.83
SNRNP40-205ENST00000486941 IMPA1P29218 277 aa3.65□□□□□ -1.83
SNRNP40-205ENST00000486941 TYK2P29597 1187 aa3.65□□□□□ -1.83
SNRNP40-205ENST00000486941 CYB561P49447 251 aa3.65□□□□□ -1.83
SNRNP40-205ENST00000486941 HLCSP50747 726 aa3.65□□□□□ -1.83
SNRNP40-205ENST00000486941 OR4D2P58180 307 aa3.65□□□□□ -1.83
SNRNP40-205ENST00000486941 MLF1P58340 268 aa3.65□□□□□ -1.83
SNRNP40-205ENST00000486941 SLC26A5P58743 744 aa3.65□□□□□ -1.83
SNRNP40-205ENST00000486941 SKP1P63208 163 aa3.65□□□□□ -1.83
SNRNP40-205ENST00000486941 BASP1P80723 227 aaKnown RBP3.65□□□□□ -1.83
SNRNP40-205ENST00000486941 SARNPP82979 210 aaKnown RBP3.65□□□□□ -1.83
SNRNP40-205ENST00000486941 OC90Q02509 493 aaPredicted RBP3.65□□□□□ -1.83
SNRNP40-205ENST00000486941 SNX1Q13596 522 aa3.65□□□□□ -1.83
SNRNP40-205ENST00000486941 ABRAXAS2Q15018 415 aa3.65□□□□□ -1.83
SNRNP40-205ENST00000486941 HERC3Q15034 1050 aa3.65□□□□□ -1.83
SNRNP40-205ENST00000486941 TPSAB1Q15661 275 aa3.65□□□□□ -1.83
SNRNP40-205ENST00000486941 HEPHL1Q6MZM0 1159 aa3.65□□□□□ -1.83
SNRNP40-205ENST00000486941 CAPN13Q6MZZ7 669 aaPredicted RBP3.65□□□□□ -1.83
SNRNP40-205ENST00000486941 LRRC8EQ6NSJ5 796 aa3.65□□□□□ -1.83
SNRNP40-205ENST00000486941 NIPAL1Q6NVV3 410 aa3.65□□□□□ -1.83
SNRNP40-205ENST00000486941 CES3Q6UWW8 571 aa3.65□□□□□ -1.83
SNRNP40-205ENST00000486941 CENPUQ71F23 418 aa3.65□□□□□ -1.83
SNRNP40-205ENST00000486941 PRSS41Q7RTY9 318 aa3.65□□□□□ -1.83
SNRNP40-205ENST00000486941 PRUNE1Q86TP1 453 aa3.65□□□□□ -1.83
SNRNP40-205ENST00000486941 ASPGQ86U10 573 aa3.65□□□□□ -1.83
SNRNP40-205ENST00000486941 SLC26A11Q86WA9 606 aa3.65□□□□□ -1.83
SNRNP40-205ENST00000486941 C17orf64Q86WR6 236 aa3.65□□□□□ -1.83
SNRNP40-205ENST00000486941 OTUD6BQ8N6M0 293 aa3.65□□□□□ -1.83
SNRNP40-205ENST00000486941 PRELID2Q8N945 189 aa3.65□□□□□ -1.83
SNRNP40-205ENST00000486941 MFSD9Q8NBP5 474 aa3.65□□□□□ -1.83
SNRNP40-205ENST00000486941 OR14A16Q8NHC5 309 aa3.65□□□□□ -1.83
SNRNP40-205ENST00000486941 LILRB4Q8NHJ6 448 aa3.65□□□□□ -1.83
SNRNP40-205ENST00000486941 FAM57AQ8TBR7 257 aa3.65□□□□□ -1.83
SNRNP40-205ENST00000486941 SLC13A3Q8WWT9 602 aa3.65□□□□□ -1.83
SNRNP40-205ENST00000486941 TAF15Q92804 592 aaKnown RBP eCLIP3.65□□□□□ -1.83
SNRNP40-205ENST00000486941 KCNJ9Q92806 393 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms