RNA–Protein interactions for RNA: ENST00000486227.5

HDAC6-228, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 4,718 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-228ENST00000486227 XKR7Q5GH72 579 aa10.38□□□□□ -0.75
HDAC6-228ENST00000486227 C22orf42Q6IC83 251 aa10.38□□□□□ -0.75
HDAC6-228ENST00000486227 FAM180AQ6UWF9 173 aa10.38□□□□□ -0.75
HDAC6-228ENST00000486227 EID2Q8N6I1 236 aa10.38□□□□□ -0.75
HDAC6-228ENST00000486227 IQCF1Q8N6M8 205 aa10.38□□□□□ -0.75
HDAC6-228ENST00000486227 PITHD1Q9GZP4 211 aaPredicted RBP10.38□□□□□ -0.75
HDAC6-228ENST00000486227 MBNL1Q9NR56 388 aaKnown RBP10.38□□□□□ -0.75
HDAC6-228ENST00000486227 PCDHGB2Q9Y5G2 931 aa10.38□□□□□ -0.75
HDAC6-228ENST00000486227 H3BSH0 61 aa10.37□□□□□ -0.75
HDAC6-228ENST00000486227 PROM1O43490 865 aa10.37□□□□□ -0.75
HDAC6-228ENST00000486227 SYNGR4O95473 234 aa10.37□□□□□ -0.75
HDAC6-228ENST00000486227 AK1P00568 194 aa10.37□□□□□ -0.75
HDAC6-228ENST00000486227 DBIP07108 87 aaKnown RBP10.37□□□□□ -0.75
HDAC6-228ENST00000486227 CDK10Q15131 360 aa10.37□□□□□ -0.75
HDAC6-228ENST00000486227 CBLL1Q75N03 491 aa10.37□□□□□ -0.75
HDAC6-228ENST00000486227 NRARPQ7Z6K4 114 aa10.37□□□□□ -0.75
HDAC6-228ENST00000486227 NRMQ8IXM6 262 aa10.37□□□□□ -0.75
HDAC6-228ENST00000486227 OR8J2Q8NGG1 315 aa10.37□□□□□ -0.75
HDAC6-228ENST00000486227 FAM46AQ96IP4 442 aaKnown RBP10.37□□□□□ -0.75
HDAC6-228ENST00000486227 CCDC115Q96NT0 180 aa10.37□□□□□ -0.75
HDAC6-228ENST00000486227 SECISBP2Q96T21 854 aaKnown RBP10.37□□□□□ -0.75
HDAC6-228ENST00000486227 PLEKHM1Q9Y4G2 1056 aa10.37□□□□□ -0.75
HDAC6-228ENST00000486227 DOCK3Q8IZD9 2030 aa10.37□□□□□ -0.75
HDAC6-228ENST00000486227 TRAV6A0A075B6T7 132 aa10.37□□□□□ -0.75
HDAC6-228ENST00000486227 A0A1W2PQ09 198 aa10.37□□□□□ -0.75
HDAC6-228ENST00000486227 SLC5A10A0PJK1 596 aa10.37□□□□□ -0.75
HDAC6-228ENST00000486227 UNC119BA6NIH7 251 aa10.37□□□□□ -0.75
HDAC6-228ENST00000486227 SOX1O00570 391 aaPredicted RBP10.37□□□□□ -0.75
HDAC6-228ENST00000486227 SLC16A6O15403 523 aa10.37□□□□□ -0.75
HDAC6-228ENST00000486227 SERPINA3P01011 423 aa10.37□□□□□ -0.75
HDAC6-228ENST00000486227 TNFSF8P32971 234 aa10.37□□□□□ -0.75
HDAC6-228ENST00000486227 GGT2P36268 569 aa10.37□□□□□ -0.75
HDAC6-228ENST00000486227 TSPAN5P62079 268 aa10.37□□□□□ -0.75
HDAC6-228ENST00000486227 MAPK14Q16539 360 aa10.37□□□□□ -0.75
HDAC6-228ENST00000486227 SYPL1Q16563 259 aa10.37□□□□□ -0.75
HDAC6-228ENST00000486227 SPATC1Q76KD6 591 aa10.37□□□□□ -0.75
HDAC6-228ENST00000486227 UBALD2Q8IYN6 164 aa10.37□□□□□ -0.75
HDAC6-228ENST00000486227 CHST4Q8NCG5 386 aa10.37□□□□□ -0.75
HDAC6-228ENST00000486227 OR5H6Q8NGV6 325 aa10.37□□□□□ -0.75
HDAC6-228ENST00000486227 OR2L8Q8NGY9 312 aa10.37□□□□□ -0.75
HDAC6-228ENST00000486227 THEM6Q8WUY1 208 aa10.37□□□□□ -0.75
HDAC6-228ENST00000486227 MS4A4EQ96PG1 132 aa10.37□□□□□ -0.75
HDAC6-228ENST00000486227 CRB3Q9BUF7 120 aa10.37□□□□□ -0.75
HDAC6-228ENST00000486227 LGR4Q9BXB1 951 aa10.37□□□□□ -0.75
HDAC6-228ENST00000486227 ALOXE3Q9BYJ1 711 aa10.37□□□□□ -0.75
HDAC6-228ENST00000486227 BCL2L14Q9BZR8 327 aa10.37□□□□□ -0.75
HDAC6-228ENST00000486227 SEC61A2Q9H9S3 476 aa10.37□□□□□ -0.75
HDAC6-228ENST00000486227 TAAR2Q9P1P5 351 aa10.37□□□□□ -0.75
HDAC6-228ENST00000486227 UGT2A1Q9Y4X1 527 aa10.37□□□□□ -0.75
HDAC6-228ENST00000486227 CROCCQ5TZA2 2017 aa10.37□□□□□ -0.75
HDAC6-228ENST00000486227 TRIP12Q14669 1992 aaPredicted RBP10.37□□□□□ -0.75
HDAC6-228ENST00000486227 A0A075B6Q4 140 aa10.37□□□□□ -0.75
HDAC6-228ENST00000486227 A0A1W2PQL4 384 aaPredicted RBP10.37□□□□□ -0.75
HDAC6-228ENST00000486227 HYKKA2RU49 373 aa10.37□□□□□ -0.75
HDAC6-228ENST00000486227 NPIPA5E9PKD4 350 aa10.37□□□□□ -0.75
HDAC6-228ENST00000486227 MSL3P1P0C860 447 aa10.37□□□□□ -0.75
HDAC6-228ENST00000486227 OR12D2P58182 307 aa10.37□□□□□ -0.75
HDAC6-228ENST00000486227 GBX1Q14549 363 aa10.37□□□□□ -0.75
HDAC6-228ENST00000486227 AKIRIN2Q53H80 203 aa10.37□□□□□ -0.75
HDAC6-228ENST00000486227 ABHD17BQ5VST6 288 aa10.37□□□□□ -0.75
HDAC6-228ENST00000486227 GTF2IRD2BQ6EKJ0 949 aa10.37□□□□□ -0.75
HDAC6-228ENST00000486227 PAMR1Q6UXH9 720 aa10.37□□□□□ -0.75
HDAC6-228ENST00000486227 LINGO2Q7L985 606 aa10.37□□□□□ -0.75
HDAC6-228ENST00000486227 GTF2IRD2Q86UP8 949 aa10.37□□□□□ -0.75
HDAC6-228ENST00000486227 ZNF683Q8IZ20 524 aa10.37□□□□□ -0.75
HDAC6-228ENST00000486227 SPAG16Q8N0X2 631 aa10.37□□□□□ -0.75
HDAC6-228ENST00000486227 YIPF7Q8N8F6 280 aa10.37□□□□□ -0.75
HDAC6-228ENST00000486227 NPIPA1Q9UND3 350 aa10.37□□□□□ -0.75
HDAC6-228ENST00000486227 C2orf92A0A1B0GVN3 265 aa10.36□□□□□ -0.75
HDAC6-228ENST00000486227 METTL15A6NJ78 407 aa10.36□□□□□ -0.75
HDAC6-228ENST00000486227 C11orf98E9PRG8 122 aa10.36□□□□□ -0.75
HDAC6-228ENST00000486227 ALX3O95076 343 aa10.36□□□□□ -0.75
HDAC6-228ENST00000486227 EGFP01133 1207 aa10.36□□□□□ -0.75
HDAC6-228ENST00000486227 SRFP11831 508 aa10.36□□□□□ -0.75
HDAC6-228ENST00000486227 NDUFV2P19404 249 aa10.36□□□□□ -0.75
HDAC6-228ENST00000486227 VLDLRP98155 873 aa10.36□□□□□ -0.75
HDAC6-228ENST00000486227 HOXC5Q00444 222 aa10.36□□□□□ -0.75
HDAC6-228ENST00000486227 CDC20Q12834 499 aa10.36□□□□□ -0.75
HDAC6-228ENST00000486227 EEF1AKMT2Q5JPI9 291 aaKnown RBP10.36□□□□□ -0.75
HDAC6-228ENST00000486227 LILRA6Q6PI73 481 aa10.36□□□□□ -0.75
HDAC6-228ENST00000486227 MYADMQ96S97 322 aa10.36□□□□□ -0.75
HDAC6-228ENST00000486227 FUZQ9BT04 418 aa10.36□□□□□ -0.75
HDAC6-228ENST00000486227 DPCDQ9BVM2 203 aaPredicted RBP10.36□□□□□ -0.75
HDAC6-228ENST00000486227 ABCG5Q9H222 651 aa10.36□□□□□ -0.75
HDAC6-228ENST00000486227 GRHPRQ9UBQ7 328 aa10.36□□□□□ -0.75
HDAC6-228ENST00000486227 GNG8Q9UK08 70 aa10.36□□□□□ -0.75
HDAC6-228ENST00000486227 NAALAD2Q9Y3Q0 740 aa10.36□□□□□ -0.75
HDAC6-228ENST00000486227 WASHC1A8K0Z3 465 aa10.36□□□□□ -0.75
HDAC6-228ENST00000486227 LYRM1O43325 122 aa10.36□□□□□ -0.75
HDAC6-228ENST00000486227 ODF4Q2M2E3 257 aa10.36□□□□□ -0.75
HDAC6-228ENST00000486227 KLHL26Q53HC5 615 aa10.36□□□□□ -0.75
HDAC6-228ENST00000486227 WASH2PQ6VEQ5 465 aa10.36□□□□□ -0.75
HDAC6-228ENST00000486227 MCATQ8IVS2 390 aaKnown RBP10.36□□□□□ -0.75
HDAC6-228ENST00000486227 SDR16C5Q8N3Y7 309 aa10.36□□□□□ -0.75
HDAC6-228ENST00000486227 HORMAD2Q8N7B1 307 aa10.36□□□□□ -0.75
HDAC6-228ENST00000486227 CDRT4Q8N9R6 151 aa10.36□□□□□ -0.75
HDAC6-228ENST00000486227 CEP76Q8TAP6 659 aa10.36□□□□□ -0.75
HDAC6-228ENST00000486227 NEIL3Q8TAT5 605 aa10.36□□□□□ -0.75
HDAC6-228ENST00000486227 CREB3L4Q8TEY5 395 aa10.36□□□□□ -0.75
HDAC6-228ENST00000486227 TM9SF2Q99805 663 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms