RNA–Protein interactions for RNA: ENST00000485479.5

APTX-227, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,986 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-227ENST00000485479 TRIM3O75382 744 aaPredicted RBP10.85□□□□□ -0.67
APTX-227ENST00000485479 ZCCHC18P0CG32 403 aa10.85□□□□□ -0.67
APTX-227ENST00000485479 NAGAP17050 411 aa10.85□□□□□ -0.67
APTX-227ENST00000485479 ATP6V1C1P21283 382 aa10.85□□□□□ -0.67
APTX-227ENST00000485479 DCTP40126 519 aa10.85□□□□□ -0.67
APTX-227ENST00000485479 DSTNP60981 165 aa10.85□□□□□ -0.67
APTX-227ENST00000485479 CHRNEQ04844 493 aa10.85□□□□□ -0.67
APTX-227ENST00000485479 LRRC74AQ0VAA2 488 aa10.85□□□□□ -0.67
APTX-227ENST00000485479 MAPK14Q16539 360 aa10.85□□□□□ -0.67
APTX-227ENST00000485479 PDZK1Q5T2W1 519 aa10.85□□□□□ -0.67
APTX-227ENST00000485479 RPUSD3Q6P087 351 aaKnown RBP10.85□□□□□ -0.67
APTX-227ENST00000485479 SPPL2CQ8IUH8 684 aa10.85□□□□□ -0.67
APTX-227ENST00000485479 MIPOL1Q8TD10 442 aa10.85□□□□□ -0.67
APTX-227ENST00000485479 BCAS4Q8TDM0 211 aa10.85□□□□□ -0.67
APTX-227ENST00000485479 ZNF597Q96LX8 424 aa10.85□□□□□ -0.67
APTX-227ENST00000485479 CPPED1Q9BRF8 314 aaPredicted RBP10.85□□□□□ -0.67
APTX-227ENST00000485479 ANGPTL4Q9BY76 406 aa10.85□□□□□ -0.67
APTX-227ENST00000485479 TBL1XR1Q9BZK7 514 aa10.85□□□□□ -0.67
APTX-227ENST00000485479 ZNF703Q9H7S9 590 aaPredicted RBP10.85□□□□□ -0.67
APTX-227ENST00000485479 MED11Q9P086 117 aa10.85□□□□□ -0.67
APTX-227ENST00000485479 SH3BGRL2Q9UJC5 107 aa10.85□□□□□ -0.67
APTX-227ENST00000485479 PCDHGB6Q9Y5F9 930 aa10.85□□□□□ -0.67
APTX-227ENST00000485479 OIP5O43482 229 aa10.84□□□□□ -0.67
APTX-227ENST00000485479 TNFRSF21O75509 655 aa10.84□□□□□ -0.67
APTX-227ENST00000485479 TRAPPC6AO75865 159 aa10.84□□□□□ -0.67
APTX-227ENST00000485479 KRT75O95678 551 aa10.84□□□□□ -0.67
APTX-227ENST00000485479 ANGPTL1O95841 491 aa10.84□□□□□ -0.67
APTX-227ENST00000485479 GDF1P27539 372 aa10.84□□□□□ -0.67
APTX-227ENST00000485479 AQP1P29972 269 aa10.84□□□□□ -0.67
APTX-227ENST00000485479 TDGF1P3P51864 188 aa10.84□□□□□ -0.67
APTX-227ENST00000485479 GAS1P54826 345 aa10.84□□□□□ -0.67
APTX-227ENST00000485479 PSMD4P55036 377 aaKnown RBP10.84□□□□□ -0.67
APTX-227ENST00000485479 EFR3AQ14156 821 aa10.84□□□□□ -0.67
APTX-227ENST00000485479 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.84□□□□□ -0.67
APTX-227ENST00000485479 ARHGAP11BQ3KRB8 267 aa10.84□□□□□ -0.67
APTX-227ENST00000485479 CMPK2Q5EBM0 449 aa10.84□□□□□ -0.67
APTX-227ENST00000485479 ATAD3BQ5T9A4 648 aa10.84□□□□□ -0.67
APTX-227ENST00000485479 GKAP1Q5VSY0 366 aaPredicted RBP10.84□□□□□ -0.67
APTX-227ENST00000485479 ZNF324BQ6AW86 544 aaPredicted RBP10.84□□□□□ -0.67
APTX-227ENST00000485479 TYW3Q6IPR3 259 aaKnown RBP10.84□□□□□ -0.67
APTX-227ENST00000485479 HEPHL1Q6MZM0 1159 aa10.84□□□□□ -0.67
APTX-227ENST00000485479 FRRS1Q6ZNA5 592 aa10.84□□□□□ -0.67
APTX-227ENST00000485479 PACS2Q86VP3 889 aa10.84□□□□□ -0.67
APTX-227ENST00000485479 DND1Q8IYX4 353 aaKnown RBP10.84□□□□□ -0.67
APTX-227ENST00000485479 DPP10Q8N608 796 aa10.84□□□□□ -0.67
APTX-227ENST00000485479 FBXO27Q8NI29 283 aa10.84□□□□□ -0.67
APTX-227ENST00000485479 DUSP19Q8WTR2 217 aa10.84□□□□□ -0.67
APTX-227ENST00000485479 THUMPD3Q9BV44 507 aaKnown RBP10.84□□□□□ -0.67
APTX-227ENST00000485479 ZFP64Q9NPA5 681 aa10.84□□□□□ -0.67
APTX-227ENST00000485479 MRTO4Q9UKD2 239 aaKnown RBP10.84□□□□□ -0.67
APTX-227ENST00000485479 WDR45Q9Y484 360 aa10.84□□□□□ -0.67
APTX-227ENST00000485479 DUXAA6NLW8 204 aa10.83□□□□□ -0.68
APTX-227ENST00000485479 SHISA8B8ZZ34 492 aa10.83□□□□□ -0.68
APTX-227ENST00000485479 NDUFAB1O14561 156 aa10.83□□□□□ -0.68
APTX-227ENST00000485479 GLSO94925 669 aaPredicted RBP10.83□□□□□ -0.68
APTX-227ENST00000485479 CBX6O95503 412 aa10.83□□□□□ -0.68
APTX-227ENST00000485479 KRT16P08779 473 aa10.83□□□□□ -0.68
APTX-227ENST00000485479 NR2F1P10589 423 aa10.83□□□□□ -0.68
APTX-227ENST00000485479 HPGDP15428 266 aa10.83□□□□□ -0.68
APTX-227ENST00000485479 NUDT2P50583 147 aa10.83□□□□□ -0.68
APTX-227ENST00000485479 HPCAP84074 193 aa10.83□□□□□ -0.68
APTX-227ENST00000485479 TRMT5Q32P41 509 aaKnown RBP10.83□□□□□ -0.68
APTX-227ENST00000485479 RUNDC3AQ59EK9 446 aa10.83□□□□□ -0.68
APTX-227ENST00000485479 CBLN3Q6UW01 205 aa10.83□□□□□ -0.68
APTX-227ENST00000485479 SIAH3Q8IW03 269 aa10.83□□□□□ -0.68
APTX-227ENST00000485479 FITM2Q8N6M3 262 aa10.83□□□□□ -0.68
APTX-227ENST00000485479 OR5M1Q8NGP8 315 aa10.83□□□□□ -0.68
APTX-227ENST00000485479 OR1J4Q8NGS1 313 aa10.83□□□□□ -0.68
APTX-227ENST00000485479 SLC38A5Q8WUX1 472 aa10.83□□□□□ -0.68
APTX-227ENST00000485479 LRRC58Q96CX6 371 aa10.83□□□□□ -0.68
APTX-227ENST00000485479 TMEM19Q96HH6 336 aa10.83□□□□□ -0.68
APTX-227ENST00000485479 ANKRD27Q96NW4 1050 aa10.83□□□□□ -0.68
APTX-227ENST00000485479 LRRC37BQ96QE4 947 aa10.83□□□□□ -0.68
APTX-227ENST00000485479 NPAS1Q99742 590 aa10.83□□□□□ -0.68
APTX-227ENST00000485479 SLX1AQ9BQ83 275 aa10.83□□□□□ -0.68
APTX-227ENST00000485479 G6PC3Q9BUM1 346 aa10.83□□□□□ -0.68
APTX-227ENST00000485479 ZNF350Q9GZX5 532 aa10.83□□□□□ -0.68
APTX-227ENST00000485479 SLC6A15Q9H2J7 730 aa10.83□□□□□ -0.68
APTX-227ENST00000485479 EXD2Q9NVH0 621 aa10.83□□□□□ -0.68
APTX-227ENST00000485479 ARL8BQ9NVJ2 186 aa10.83□□□□□ -0.68
APTX-227ENST00000485479 PPP4R1LQ9P1A2 415 aa10.83□□□□□ -0.68
APTX-227ENST00000485479 PACSIN3Q9UKS6 424 aa10.83□□□□□ -0.68
APTX-227ENST00000485479 BOKQ9UMX3 212 aaPredicted RBP10.83□□□□□ -0.68
APTX-227ENST00000485479 RPH3AQ9Y2J0 694 aaPredicted RBP10.83□□□□□ -0.68
APTX-227ENST00000485479 STX11O75558 287 aa10.83□□□□□ -0.68
APTX-227ENST00000485479 UGT2B17O75795 530 aa10.83□□□□□ -0.68
APTX-227ENST00000485479 CYP7B1O75881 506 aa10.83□□□□□ -0.68
APTX-227ENST00000485479 WISP1O95388 367 aa10.83□□□□□ -0.68
APTX-227ENST00000485479 CRYABP02511 175 aaKnown RBP10.83□□□□□ -0.68
APTX-227ENST00000485479 GNLYP22749 145 aa10.83□□□□□ -0.68
APTX-227ENST00000485479 IRX1P78414 480 aaPredicted RBP10.83□□□□□ -0.68
APTX-227ENST00000485479 EIF2S3LQ2VIR3 472 aaKnown RBP10.83□□□□□ -0.68
APTX-227ENST00000485479 EIPR1Q53HC9 387 aa10.83□□□□□ -0.68
APTX-227ENST00000485479 NANOGP8Q6NSW7 305 aa10.83□□□□□ -0.68
APTX-227ENST00000485479 C3P1Q6ZMU1 363 aa10.83□□□□□ -0.68
APTX-227ENST00000485479 YRDCQ86U90 279 aaKnown RBP10.83□□□□□ -0.68
APTX-227ENST00000485479 CCDC197Q8NCU1 140 aa10.83□□□□□ -0.68
APTX-227ENST00000485479 CHDHQ8NE62 594 aaPredicted RBP10.83□□□□□ -0.68
APTX-227ENST00000485479 OR10A6Q8NH74 314 aa10.83□□□□□ -0.68
APTX-227ENST00000485479 NFKBIDQ8NI38 313 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms