RNA–Protein interactions for RNA: ENST00000483888.6

COL12A1-207, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL12A1, Length 9,637 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-207ENST00000483888 SPIN2AQ99865 258 aa9.73□□□□□ -0.85
COL12A1-207ENST00000483888 SPIN2BQ9BPZ2 258 aa9.73□□□□□ -0.85
COL12A1-207ENST00000483888 SLCO5A1Q9H2Y9 848 aa9.73□□□□□ -0.85
COL12A1-207ENST00000483888 PTPN2P17706 415 aa9.73□□□□□ -0.85
COL12A1-207ENST00000483888 GABRA2P47869 451 aa9.73□□□□□ -0.85
COL12A1-207ENST00000483888 RAB28P51157 221 aa9.73□□□□□ -0.85
COL12A1-207ENST00000483888 RPE65Q16518 533 aa9.73□□□□□ -0.85
COL12A1-207ENST00000483888 DNERQ8NFT8 737 aa9.73□□□□□ -0.85
COL12A1-207ENST00000483888 CMKLR1Q99788 373 aa9.73□□□□□ -0.85
COL12A1-207ENST00000483888 CNOT2Q9NZN8 540 aaKnown RBP9.73□□□□□ -0.85
COL12A1-207ENST00000483888 B3GALT2O43825 422 aa9.73□□□□□ -0.85
COL12A1-207ENST00000483888 NTSR2O95665 410 aa9.73□□□□□ -0.85
COL12A1-207ENST00000483888 TNFRSF1BP20333 461 aa9.73□□□□□ -0.85
COL12A1-207ENST00000483888 PSMB1P20618 241 aaKnown RBP9.73□□□□□ -0.85
COL12A1-207ENST00000483888 GDF5P43026 501 aa9.73□□□□□ -0.85
COL12A1-207ENST00000483888 SGSHP51688 502 aa9.73□□□□□ -0.85
COL12A1-207ENST00000483888 BTG1P62324 171 aa9.73□□□□□ -0.85
COL12A1-207ENST00000483888 MOGAT2Q3SYC2 334 aa9.73□□□□□ -0.85
COL12A1-207ENST00000483888 C9orf152Q5JTZ5 239 aa9.73□□□□□ -0.85
COL12A1-207ENST00000483888 SIRPB2Q5JXA9 342 aa9.73□□□□□ -0.85
COL12A1-207ENST00000483888 FAM86B1Q8N7N1 296 aa9.73□□□□□ -0.85
COL12A1-207ENST00000483888 SLC35F5Q8WV83 523 aa9.73□□□□□ -0.85
COL12A1-207ENST00000483888 ZNF681Q96N22 645 aa9.73□□□□□ -0.85
COL12A1-207ENST00000483888 FAM103A1Q9BTL3 118 aaKnown RBP9.73□□□□□ -0.85
COL12A1-207ENST00000483888 SLC25A18Q9H1K4 315 aa9.73□□□□□ -0.85
COL12A1-207ENST00000483888 M0R143 59 aa9.72□□□□□ -0.85
COL12A1-207ENST00000483888 GABRPO00591 440 aa9.72□□□□□ -0.85
COL12A1-207ENST00000483888 EEF1A1P68104 462 aaKnown RBP9.72□□□□□ -0.85
COL12A1-207ENST00000483888 EEF1A2Q05639 463 aaKnown RBP9.72□□□□□ -0.85
COL12A1-207ENST00000483888 GRIK5Q16478 980 aa9.72□□□□□ -0.85
COL12A1-207ENST00000483888 ZNF74Q16587 644 aa9.72□□□□□ -0.85
COL12A1-207ENST00000483888 EEF1A1P5Q5VTE0 462 aa9.72□□□□□ -0.85
COL12A1-207ENST00000483888 NCBP2-AS2Q69YL0 99 aa9.72□□□□□ -0.85
COL12A1-207ENST00000483888 TMEM125Q96AQ2 219 aa9.72□□□□□ -0.85
COL12A1-207ENST00000483888 PDCD2LQ9BRP1 358 aa9.72□□□□□ -0.85
COL12A1-207ENST00000483888 ST6GALNAC5Q9BVH7 336 aa9.72□□□□□ -0.85
COL12A1-207ENST00000483888 TAF9BQ9HBM6 251 aa9.72□□□□□ -0.85
COL12A1-207ENST00000483888 MTMR11A4FU01 709 aa9.72□□□□□ -0.85
COL12A1-207ENST00000483888 HLA-DQB2P05538 268 aa9.72□□□□□ -0.85
COL12A1-207ENST00000483888 CCKBRP32239 447 aa9.72□□□□□ -0.85
COL12A1-207ENST00000483888 PBX3P40426 434 aa9.72□□□□□ -0.85
COL12A1-207ENST00000483888 TECRLQ5HYJ1 363 aa9.72□□□□□ -0.85
COL12A1-207ENST00000483888 TSTD1Q8NFU3 115 aa9.72□□□□□ -0.85
COL12A1-207ENST00000483888 OR13C4Q8NGS5 318 aa9.72□□□□□ -0.85
COL12A1-207ENST00000483888 HAS3O00219 553 aa9.72□□□□□ -0.85
COL12A1-207ENST00000483888 ELK1P19419 428 aa9.72□□□□□ -0.85
COL12A1-207ENST00000483888 TFAP2BQ92481 460 aa9.72□□□□□ -0.85
COL12A1-207ENST00000483888 MAL2Q969L2 176 aa9.72□□□□□ -0.85
COL12A1-207ENST00000483888 GAS2L1Q99501 681 aaPredicted RBP9.72□□□□□ -0.85
COL12A1-207ENST00000483888 CD244Q9BZW8 370 aa9.72□□□□□ -0.85
COL12A1-207ENST00000483888 SIX4Q9UIU6 781 aa9.72□□□□□ -0.85
COL12A1-207ENST00000483888 SLC35G6P0C7Q6 338 aa9.72□□□□□ -0.85
COL12A1-207ENST00000483888 HTR3AP46098 478 aa9.72□□□□□ -0.85
COL12A1-207ENST00000483888 ITPRIPL2Q3MIP1 535 aa9.72□□□□□ -0.85
COL12A1-207ENST00000483888 NUDT13Q86X67 352 aa9.72□□□□□ -0.85
COL12A1-207ENST00000483888 SIAH3Q8IW03 269 aa9.72□□□□□ -0.85
COL12A1-207ENST00000483888 IMP4Q96G21 291 aaKnown RBP9.72□□□□□ -0.85
COL12A1-207ENST00000483888 MEGF10Q96KG7 1140 aa9.72□□□□□ -0.85
COL12A1-207ENST00000483888 A0A1W2PQH9 124 aa9.72□□□□□ -0.85
COL12A1-207ENST00000483888 BRINP1O60477 761 aa9.72□□□□□ -0.85
COL12A1-207ENST00000483888 GABARAPO95166 117 aa9.72□□□□□ -0.85
COL12A1-207ENST00000483888 OR12D1P0DN82 309 aa9.72□□□□□ -0.85
COL12A1-207ENST00000483888 NDUFV2P19404 249 aa9.72□□□□□ -0.85
COL12A1-207ENST00000483888 ZNF33AQ06730 810 aa9.72□□□□□ -0.85
COL12A1-207ENST00000483888 MSLNLQ96KJ4 702 aa9.72□□□□□ -0.85
COL12A1-207ENST00000483888 POFUT1Q9H488 388 aa9.72□□□□□ -0.85
COL12A1-207ENST00000483888 CNTRLQ7Z7A1 2325 aa9.72□□□□□ -0.85
COL12A1-207ENST00000483888 MEIS2O14770 477 aa9.72□□□□□ -0.85
COL12A1-207ENST00000483888 POLR2HP52434 150 aaKnown RBP9.72□□□□□ -0.85
COL12A1-207ENST00000483888 HSD11B2P80365 405 aa9.72□□□□□ -0.85
COL12A1-207ENST00000483888 CHRNEQ04844 493 aa9.72□□□□□ -0.85
COL12A1-207ENST00000483888 MAP2K5Q13163 448 aa9.72□□□□□ -0.85
COL12A1-207ENST00000483888 LINC00299Q6ZSB3 139 aa9.72□□□□□ -0.85
COL12A1-207ENST00000483888 SLC7A11Q9UPY5 501 aa9.72□□□□□ -0.85
COL12A1-207ENST00000483888 ASGR1P07306 291 aa9.72□□□□□ -0.85
COL12A1-207ENST00000483888 SEC61A1P61619 476 aaKnown RBP9.72□□□□□ -0.85
COL12A1-207ENST00000483888 C9orf57Q5W0N0 161 aa9.72□□□□□ -0.85
COL12A1-207ENST00000483888 GDPD3Q7L5L3 318 aa9.72□□□□□ -0.85
COL12A1-207ENST00000483888 PHYKPLQ8IUZ5 450 aa9.72□□□□□ -0.85
COL12A1-207ENST00000483888 KLHDC1Q8N7A1 406 aa9.72□□□□□ -0.85
COL12A1-207ENST00000483888 PSMG2Q969U7 264 aa9.72□□□□□ -0.85
COL12A1-207ENST00000483888 RADILQ96JH8 1075 aa9.72□□□□□ -0.85
COL12A1-207ENST00000483888 LMLNQ96KR4 655 aa9.72□□□□□ -0.85
COL12A1-207ENST00000483888 MCHR1Q99705 422 aa9.72□□□□□ -0.85
COL12A1-207ENST00000483888 TRAF4Q9BUZ4 470 aaPredicted RBP9.72□□□□□ -0.85
COL12A1-207ENST00000483888 DDX31Q9H8H2 851 aaKnown RBP9.72□□□□□ -0.85
COL12A1-207ENST00000483888 ELP3Q9H9T3 547 aa9.72□□□□□ -0.85
COL12A1-207ENST00000483888 ZNF586Q9NXT0 402 aa9.72□□□□□ -0.85
COL12A1-207ENST00000483888 FBXW11Q9UKB1 542 aa9.72□□□□□ -0.85
COL12A1-207ENST00000483888 USF1P22415 310 aaPredicted RBP9.72□□□□□ -0.85
COL12A1-207ENST00000483888 RAB1AP62820 205 aa9.72□□□□□ -0.85
COL12A1-207ENST00000483888 BTG3Q14201 252 aaPredicted RBP9.72□□□□□ -0.85
COL12A1-207ENST00000483888 MEX3BQ6ZN04 569 aaKnown RBP9.72□□□□□ -0.85
COL12A1-207ENST00000483888 FJX1Q86VR8 437 aa9.72□□□□□ -0.85
COL12A1-207ENST00000483888 NPAS4Q8IUM7 802 aa9.72□□□□□ -0.85
COL12A1-207ENST00000483888 HSD17B14Q9BPX1 270 aa9.72□□□□□ -0.85
COL12A1-207ENST00000483888 PCDHGC4Q9Y5F7 938 aa9.72□□□□□ -0.85
COL12A1-207ENST00000483888 PCDHA2Q9Y5H9 948 aa9.72□□□□□ -0.85
COL12A1-207ENST00000483888 ITGB2P05107 769 aa9.71□□□□□ -0.85
COL12A1-207ENST00000483888 NFYBP25208 207 aa9.71□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms