RNA–Protein interactions for RNA: ENST00000483847.1

SMARCC1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-205ENST00000483847 TNFSF11O14788 317 aa9.65□□□□□ -0.86
SMARCC1-205ENST00000483847 BCAS2O75934 225 aaPredicted RBP9.65□□□□□ -0.86
SMARCC1-205ENST00000483847 SYNGR4O95473 234 aa9.65□□□□□ -0.86
SMARCC1-205ENST00000483847 SPRP35270 261 aaPredicted RBP9.65□□□□□ -0.86
SMARCC1-205ENST00000483847 CDH11P55287 796 aa9.65□□□□□ -0.86
SMARCC1-205ENST00000483847 DSCR9P59020 149 aa9.65□□□□□ -0.86
SMARCC1-205ENST00000483847 DR1Q01658 176 aa9.65□□□□□ -0.86
SMARCC1-205ENST00000483847 ZNF155Q12901 538 aaPredicted RBP9.65□□□□□ -0.86
SMARCC1-205ENST00000483847 TRAF3Q13114 568 aa9.65□□□□□ -0.86
SMARCC1-205ENST00000483847 ERCC6LQ2NKX8 1250 aa9.65□□□□□ -0.86
SMARCC1-205ENST00000483847 TTC19Q6DKK2 380 aaPredicted RBP9.65□□□□□ -0.86
SMARCC1-205ENST00000483847 C11orf71Q6IPW1 123 aa9.65□□□□□ -0.86
SMARCC1-205ENST00000483847 WDR75Q8IWA0 830 aaKnown RBP9.65□□□□□ -0.86
SMARCC1-205ENST00000483847 CTAGE3PQ8IX95 158 aa9.65□□□□□ -0.86
SMARCC1-205ENST00000483847 C1orf52Q8N6N3 182 aaKnown RBP9.65□□□□□ -0.86
SMARCC1-205ENST00000483847 OR2V1Q8NHB1 315 aa9.65□□□□□ -0.86
SMARCC1-205ENST00000483847 RHEBL1Q8TAI7 183 aa9.65□□□□□ -0.86
SMARCC1-205ENST00000483847 PYROXD1Q8WU10 500 aa9.65□□□□□ -0.86
SMARCC1-205ENST00000483847 CDKL2Q92772 493 aa9.65□□□□□ -0.86
SMARCC1-205ENST00000483847 MTBPQ96DY7 904 aa9.65□□□□□ -0.86
SMARCC1-205ENST00000483847 C1orf159Q96HA4 380 aa9.65□□□□□ -0.86
SMARCC1-205ENST00000483847 NSUN5Q96P11 429 aaKnown RBP9.65□□□□□ -0.86
SMARCC1-205ENST00000483847 HDHD5Q9BXW7 423 aa9.65□□□□□ -0.86
SMARCC1-205ENST00000483847 GLRX2Q9NS18 164 aa9.65□□□□□ -0.86
SMARCC1-205ENST00000483847 FAIMQ9NVQ4 179 aa9.65□□□□□ -0.86
SMARCC1-205ENST00000483847 FAM120CQ9NX05 1096 aaKnown RBP9.65□□□□□ -0.86
SMARCC1-205ENST00000483847 CPSF2Q9P2I0 782 aaKnown RBP9.65□□□□□ -0.86
SMARCC1-205ENST00000483847 ABCG2Q9UNQ0 655 aa9.65□□□□□ -0.86
SMARCC1-205ENST00000483847 PPP2R2CQ9Y2T4 447 aa9.65□□□□□ -0.86
SMARCC1-205ENST00000483847 IGLV3-32A0A0A0MS00 114 aa9.64□□□□□ -0.87
SMARCC1-205ENST00000483847 ADAMDEC1O15204 470 aa9.64□□□□□ -0.87
SMARCC1-205ENST00000483847 ANGPTL1O95841 491 aa9.64□□□□□ -0.87
SMARCC1-205ENST00000483847 ADAP00813 363 aa9.64□□□□□ -0.87
SMARCC1-205ENST00000483847 PDYNP01213 254 aa9.64□□□□□ -0.87
SMARCC1-205ENST00000483847 FESP07332 822 aa9.64□□□□□ -0.87
SMARCC1-205ENST00000483847 IL3P08700 152 aa9.64□□□□□ -0.87
SMARCC1-205ENST00000483847 COL6A2P12110 1019 aa9.64□□□□□ -0.87
SMARCC1-205ENST00000483847 SLC25A16P16260 332 aa9.64□□□□□ -0.87
SMARCC1-205ENST00000483847 PSMA4P25789 261 aaKnown RBP9.64□□□□□ -0.87
SMARCC1-205ENST00000483847 CRABP2P29373 138 aa9.64□□□□□ -0.87
SMARCC1-205ENST00000483847 RFX3P48380 749 aa9.64□□□□□ -0.87
SMARCC1-205ENST00000483847 CCNG1P51959 295 aa9.64□□□□□ -0.87
SMARCC1-205ENST00000483847 PSPHP78330 225 aa9.64□□□□□ -0.87
SMARCC1-205ENST00000483847 IFT88Q13099 833 aa9.64□□□□□ -0.87
SMARCC1-205ENST00000483847 UBAP2Q5T6F2 1119 aaKnown RBP9.64□□□□□ -0.87
SMARCC1-205ENST00000483847 GRTP1Q5TC63 336 aa9.64□□□□□ -0.87
SMARCC1-205ENST00000483847 AGAP6Q5VW22 663 aa9.64□□□□□ -0.87
SMARCC1-205ENST00000483847 PPM1NQ8N819 430 aa9.64□□□□□ -0.87
SMARCC1-205ENST00000483847 BANPQ8N9N5 519 aa9.64□□□□□ -0.87
SMARCC1-205ENST00000483847 C10orf105Q8TEF2 133 aa9.64□□□□□ -0.87
SMARCC1-205ENST00000483847 ABHD3Q8WU67 409 aa9.64□□□□□ -0.87
SMARCC1-205ENST00000483847 FAM168AQ92567 244 aa9.64□□□□□ -0.87
SMARCC1-205ENST00000483847 SLC9A6Q92581 669 aa9.64□□□□□ -0.87
SMARCC1-205ENST00000483847 KISS1RQ969F8 398 aaPredicted RBP9.64□□□□□ -0.87
SMARCC1-205ENST00000483847 ATP6V1E2Q96A05 226 aa9.64□□□□□ -0.87
SMARCC1-205ENST00000483847 EXOSC8Q96B26 276 aaKnown RBP9.64□□□□□ -0.87
SMARCC1-205ENST00000483847 ERP27Q96DN0 273 aa9.64□□□□□ -0.87
SMARCC1-205ENST00000483847 ADAD1Q96M93 576 aaKnown RBP9.64□□□□□ -0.87
SMARCC1-205ENST00000483847 KLHDC3Q9BQ90 382 aa9.64□□□□□ -0.87
SMARCC1-205ENST00000483847 FAIM2Q9BWQ8 316 aa9.64□□□□□ -0.87
SMARCC1-205ENST00000483847 POTEKPQ9BYX7 375 aa9.64□□□□□ -0.87
SMARCC1-205ENST00000483847 L2HGDHQ9H9P8 463 aa9.64□□□□□ -0.87
SMARCC1-205ENST00000483847 EML4Q9HC35 981 aaKnown RBP9.64□□□□□ -0.87
SMARCC1-205ENST00000483847 NPAP1Q9NZP6 1156 aa9.64□□□□□ -0.87
SMARCC1-205ENST00000483847 RNF14Q9UBS8 474 aa9.64□□□□□ -0.87
SMARCC1-205ENST00000483847 SNX12Q9UMY4 172 aa9.64□□□□□ -0.87
SMARCC1-205ENST00000483847 SNX8Q9Y5X2 465 aa9.64□□□□□ -0.87
SMARCC1-205ENST00000483847 ZNF814B7Z6K7 855 aa9.63□□□□□ -0.87
SMARCC1-205ENST00000483847 E7EQL1 145 aa9.63□□□□□ -0.87
SMARCC1-205ENST00000483847 PPP6CO00743 305 aa9.63□□□□□ -0.87
SMARCC1-205ENST00000483847 ABCD4O14678 606 aa9.63□□□□□ -0.87
SMARCC1-205ENST00000483847 DLX3O60479 287 aa9.63□□□□□ -0.87
SMARCC1-205ENST00000483847 PLOD3O60568 738 aa9.63□□□□□ -0.87
SMARCC1-205ENST00000483847 LY6HO94772 140 aa9.63□□□□□ -0.87
SMARCC1-205ENST00000483847 ESRRBO95718 433 aa9.63□□□□□ -0.87
SMARCC1-205ENST00000483847 PGRP06401 933 aa9.63□□□□□ -0.87
SMARCC1-205ENST00000483847 ZNF17P17021 662 aa9.63□□□□□ -0.87
SMARCC1-205ENST00000483847 USF1P22415 310 aaPredicted RBP9.63□□□□□ -0.87
SMARCC1-205ENST00000483847 CFPP27918 469 aa9.63□□□□□ -0.87
SMARCC1-205ENST00000483847 SHC1P29353 583 aa9.63□□□□□ -0.87
SMARCC1-205ENST00000483847 LSM11P83369 360 aaKnown RBP eCLIP9.63□□□□□ -0.87
SMARCC1-205ENST00000483847 C17orf67Q0P5P2 114 aa9.63□□□□□ -0.87
SMARCC1-205ENST00000483847 CSTF3Q12996 717 aaKnown RBP9.63□□□□□ -0.87
SMARCC1-205ENST00000483847 P2RY6Q15077 328 aa9.63□□□□□ -0.87
SMARCC1-205ENST00000483847 PRSS53Q2L4Q9 553 aa9.63□□□□□ -0.87
SMARCC1-205ENST00000483847 CYP27C1Q4G0S4 372 aa9.63□□□□□ -0.87
SMARCC1-205ENST00000483847 HBMQ6B0K9 141 aa9.63□□□□□ -0.87
SMARCC1-205ENST00000483847 RPS27LQ71UM5 84 aaKnown RBP9.63□□□□□ -0.87
SMARCC1-205ENST00000483847 BHLHA15Q7RTS1 189 aaPredicted RBP9.63□□□□□ -0.87
SMARCC1-205ENST00000483847 CCDC25Q86WR0 208 aa9.63□□□□□ -0.87
SMARCC1-205ENST00000483847 TUSC5Q8IXB3 177 aa9.63□□□□□ -0.87
SMARCC1-205ENST00000483847 SLC35F6Q8N357 371 aa9.63□□□□□ -0.87
SMARCC1-205ENST00000483847 GTPBP8Q8N3Z3 284 aaPredicted RBP9.63□□□□□ -0.87
SMARCC1-205ENST00000483847 PTGR2Q8N8N7 351 aaPredicted RBP9.63□□□□□ -0.87
SMARCC1-205ENST00000483847 OR4F6Q8NGB9 312 aa9.63□□□□□ -0.87
SMARCC1-205ENST00000483847 RNF128Q8TEB7 428 aa9.63□□□□□ -0.87
SMARCC1-205ENST00000483847 MSI2Q96DH6 328 aaKnown RBP9.63□□□□□ -0.87
SMARCC1-205ENST00000483847 RNF145Q96MT1 663 aa9.63□□□□□ -0.87
SMARCC1-205ENST00000483847 GPR78Q96P69 363 aa9.63□□□□□ -0.87
SMARCC1-205ENST00000483847 ELOVL6Q9H5J4 265 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms