RNA–Protein interactions for RNA: ENST00000483495.5

CPNE1-225, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-225ENST00000483495 ZAR1Q86SH2 424 aa12.28□□□□□ -0.44
CPNE1-225ENST00000483495 MRGPREQ86SM8 312 aa12.28□□□□□ -0.44
CPNE1-225ENST00000483495 Q8N9G6 341 aaPredicted RBP12.28□□□□□ -0.44
CPNE1-225ENST00000483495 OR8J1Q8NGP2 316 aa12.28□□□□□ -0.44
CPNE1-225ENST00000483495 OR1L3Q8NH93 324 aa12.28□□□□□ -0.44
CPNE1-225ENST00000483495 MAFAQ8NHW3 353 aaPredicted RBP12.28□□□□□ -0.44
CPNE1-225ENST00000483495 PIGXQ8TBF5 258 aa12.28□□□□□ -0.44
CPNE1-225ENST00000483495 YIPF6Q96EC8 236 aa12.28□□□□□ -0.44
CPNE1-225ENST00000483495 DUSP23Q9BVJ7 150 aa12.28□□□□□ -0.44
CPNE1-225ENST00000483495 ARMC7Q9H6L4 198 aa12.28□□□□□ -0.44
CPNE1-225ENST00000483495 SLC25A19Q9HC21 320 aa12.28□□□□□ -0.44
CPNE1-225ENST00000483495 NECTIN3Q9NQS3 549 aa12.28□□□□□ -0.44
CPNE1-225ENST00000483495 GMEB2Q9UKD1 530 aa12.28□□□□□ -0.44
CPNE1-225ENST00000483495 PCDH15Q96QU1 1955 aa12.28□□□□□ -0.44
CPNE1-225ENST00000483495 A0A1B0GTQ1 180 aa12.27□□□□□ -0.44
CPNE1-225ENST00000483495 OR2W5A6NFC9 320 aa12.27□□□□□ -0.44
CPNE1-225ENST00000483495 EFCAB10A6NFE3 127 aa12.27□□□□□ -0.44
CPNE1-225ENST00000483495 PDGFBP01127 241 aaPredicted RBP12.27□□□□□ -0.44
CPNE1-225ENST00000483495 PIPP12273 146 aaPredicted RBP12.27□□□□□ -0.44
CPNE1-225ENST00000483495 FOLR1P15328 257 aa12.27□□□□□ -0.44
CPNE1-225ENST00000483495 TNNI3P19429 210 aa12.27□□□□□ -0.44
CPNE1-225ENST00000483495 CCNA2P20248 432 aa12.27□□□□□ -0.44
CPNE1-225ENST00000483495 DRD5P21918 477 aa12.27□□□□□ -0.44
CPNE1-225ENST00000483495 FPR3P25089 353 aa12.27□□□□□ -0.44
CPNE1-225ENST00000483495 C21orf33P30042 268 aaPredicted RBP12.27□□□□□ -0.44
CPNE1-225ENST00000483495 GIPRP48546 466 aa12.27□□□□□ -0.44
CPNE1-225ENST00000483495 NUDT6P53370 316 aa12.27□□□□□ -0.44
CPNE1-225ENST00000483495 EFNB1P98172 346 aa12.27□□□□□ -0.44
CPNE1-225ENST00000483495 IRF3Q14653 427 aa12.27□□□□□ -0.44
CPNE1-225ENST00000483495 YOD1Q5VVQ6 348 aaPredicted RBP12.27□□□□□ -0.44
CPNE1-225ENST00000483495 CASP12Q6UXS9 341 aa12.27□□□□□ -0.44
CPNE1-225ENST00000483495 NPSR1Q6W5P4 371 aa12.27□□□□□ -0.44
CPNE1-225ENST00000483495 RASSF6Q6ZTQ3 369 aa12.27□□□□□ -0.44
CPNE1-225ENST00000483495 TTLL10Q6ZVT0 673 aa12.27□□□□□ -0.44
CPNE1-225ENST00000483495 MBOAT2Q6ZWT7 520 aa12.27□□□□□ -0.44
CPNE1-225ENST00000483495 KIF18BQ86Y91 864 aa12.27□□□□□ -0.44
CPNE1-225ENST00000483495 GRAMD2AQ8IUY3 354 aa12.27□□□□□ -0.44
CPNE1-225ENST00000483495 NKAIN4Q8IVV8 208 aa12.27□□□□□ -0.44
CPNE1-225ENST00000483495 ZNF615Q8N8J6 731 aa12.27□□□□□ -0.44
CPNE1-225ENST00000483495 GAB3Q8WWW8 586 aa12.27□□□□□ -0.44
CPNE1-225ENST00000483495 Q96MT0 163 aa12.27□□□□□ -0.44
CPNE1-225ENST00000483495 POLDIP3Q9BY77 421 aaKnown RBP12.27□□□□□ -0.44
CPNE1-225ENST00000483495 ZNF768Q9H5H4 540 aaKnown RBP12.27□□□□□ -0.44
CPNE1-225ENST00000483495 AMBNQ9NP70 447 aa12.27□□□□□ -0.44
CPNE1-225ENST00000483495 TIMMDC1Q9NPL8 285 aa12.27□□□□□ -0.44
CPNE1-225ENST00000483495 GPR83Q9NYM4 423 aa12.27□□□□□ -0.44
CPNE1-225ENST00000483495 TESQ9UGI8 421 aaKnown RBP12.27□□□□□ -0.44
CPNE1-225ENST00000483495 WARS2Q9UGM6 360 aaKnown RBP12.27□□□□□ -0.44
CPNE1-225ENST00000483495 SCN2AQ99250 2005 aa12.27□□□□□ -0.45
CPNE1-225ENST00000483495 IGKV3D-11A0A0A0MRZ8 115 aa12.27□□□□□ -0.45
CPNE1-225ENST00000483495 NPIPA5A0A0B4J1W7 369 aa12.27□□□□□ -0.45
CPNE1-225ENST00000483495 A0A1W2PPW3 197 aa12.27□□□□□ -0.45
CPNE1-225ENST00000483495 TRAPPC13A5PLN9 417 aa12.27□□□□□ -0.45
CPNE1-225ENST00000483495 NPIPA7E9PJI5 369 aa12.27□□□□□ -0.45
CPNE1-225ENST00000483495 NPIPB9F8W1W9 429 aa12.27□□□□□ -0.45
CPNE1-225ENST00000483495 TOX3O15405 576 aaPredicted RBP12.27□□□□□ -0.45
CPNE1-225ENST00000483495 LYPD3O95274 346 aa12.27□□□□□ -0.45
CPNE1-225ENST00000483495 IGKV1D-16P01601 117 aa12.27□□□□□ -0.45
CPNE1-225ENST00000483495 CLPSP04118 112 aa12.27□□□□□ -0.45
CPNE1-225ENST00000483495 NPIPA8P0DM63 369 aa12.27□□□□□ -0.45
CPNE1-225ENST00000483495 MYF5P13349 255 aa12.27□□□□□ -0.45
CPNE1-225ENST00000483495 PRG2P13727 222 aa12.27□□□□□ -0.45
CPNE1-225ENST00000483495 HTR2AP28223 471 aa12.27□□□□□ -0.45
CPNE1-225ENST00000483495 ST13P50502 369 aaKnown RBP12.27□□□□□ -0.45
CPNE1-225ENST00000483495 NFATC3Q12968 1075 aa12.27□□□□□ -0.45
CPNE1-225ENST00000483495 DSG2Q14126 1118 aa12.27□□□□□ -0.45
CPNE1-225ENST00000483495 OCLNQ16625 522 aa12.27□□□□□ -0.45
CPNE1-225ENST00000483495 FLYWCH1Q4VC44 716 aa12.27□□□□□ -0.45
CPNE1-225ENST00000483495 CCDC81Q6ZN84 652 aa12.27□□□□□ -0.45
CPNE1-225ENST00000483495 B3GNT7Q8NFL0 401 aa12.27□□□□□ -0.45
CPNE1-225ENST00000483495 OR7G1Q8NGA0 311 aa12.27□□□□□ -0.45
CPNE1-225ENST00000483495 C16orf52Q8NHV5 167 aa12.27□□□□□ -0.45
CPNE1-225ENST00000483495 FGF11Q92914 225 aa12.27□□□□□ -0.45
CPNE1-225ENST00000483495 SLC35B4Q969S0 331 aa12.27□□□□□ -0.45
CPNE1-225ENST00000483495 CCDC74AQ96AQ1 378 aa12.27□□□□□ -0.45
CPNE1-225ENST00000483495 PRSS27Q9BQR3 290 aa12.27□□□□□ -0.45
CPNE1-225ENST00000483495 CDCA4Q9BXL8 241 aa12.27□□□□□ -0.45
CPNE1-225ENST00000483495 OR10A5Q9H207 317 aa12.27□□□□□ -0.45
CPNE1-225ENST00000483495 ERVK-19Q9WJR5 959 aa12.27□□□□□ -0.45
CPNE1-225ENST00000483495 DTX4Q9Y2E6 619 aa12.27□□□□□ -0.45
CPNE1-225ENST00000483495 MAU2Q9Y6X3 613 aa12.27□□□□□ -0.45
CPNE1-225ENST00000483495 ENTPD6O75354 484 aa12.26□□□□□ -0.45
CPNE1-225ENST00000483495 GABARAPO95166 117 aa12.26□□□□□ -0.45
CPNE1-225ENST00000483495 CT45A8P0DMV1 189 aa12.26□□□□□ -0.45
CPNE1-225ENST00000483495 CT45A9P0DMV2 189 aa12.26□□□□□ -0.45
CPNE1-225ENST00000483495 STAT5AP42229 794 aa12.26□□□□□ -0.45
CPNE1-225ENST00000483495 SMSP52788 366 aa12.26□□□□□ -0.45
CPNE1-225ENST00000483495 ST3GAL4Q11206 333 aa12.26□□□□□ -0.45
CPNE1-225ENST00000483495 GINS1Q14691 196 aa12.26□□□□□ -0.45
CPNE1-225ENST00000483495 ZNF141Q15928 474 aa12.26□□□□□ -0.45
CPNE1-225ENST00000483495 CTF1Q16619 201 aa12.26□□□□□ -0.45
CPNE1-225ENST00000483495 ZSWIM7Q19AV6 140 aa12.26□□□□□ -0.45
CPNE1-225ENST00000483495 PLK5Q496M5 336 aa12.26□□□□□ -0.45
CPNE1-225ENST00000483495 CT45A2Q5DJT8 189 aa12.26□□□□□ -0.45
CPNE1-225ENST00000483495 PEAR1Q5VY43 1037 aaPredicted RBP12.26□□□□□ -0.45
CPNE1-225ENST00000483495 QSOX2Q6ZRP7 698 aa12.26□□□□□ -0.45
CPNE1-225ENST00000483495 RRM2BQ7LG56 351 aa12.26□□□□□ -0.45
CPNE1-225ENST00000483495 GPR135Q8IZ08 494 aa12.26□□□□□ -0.45
CPNE1-225ENST00000483495 FAM26EQ8N5C1 309 aa12.26□□□□□ -0.45
CPNE1-225ENST00000483495 POGLUT1Q8NBL1 392 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms