RNA–Protein interactions for RNA: ENST00000483326.1

LTN1-205, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene LTN1, Length 1,753 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-205ENST00000483326 LRRC38Q5VT99 294 aa3.9□□□□□ -1.79
LTN1-205ENST00000483326 METRNLQ641Q3 311 aa3.9□□□□□ -1.79
LTN1-205ENST00000483326 PODNL1Q6PEZ8 512 aa3.9□□□□□ -1.79
LTN1-205ENST00000483326 ENPP7Q6UWV6 458 aa3.9□□□□□ -1.79
LTN1-205ENST00000483326 P2RY8Q86VZ1 359 aa3.9□□□□□ -1.79
LTN1-205ENST00000483326 SLC13A5Q86YT5 568 aaPredicted RBP3.9□□□□□ -1.79
LTN1-205ENST00000483326 KLBQ86Z14 1044 aa3.9□□□□□ -1.79
LTN1-205ENST00000483326 SPAG16Q8N0X2 631 aa3.9□□□□□ -1.79
LTN1-205ENST00000483326 PYROXD2Q8N2H3 581 aa3.9□□□□□ -1.79
LTN1-205ENST00000483326 SVOPLQ8N434 492 aa3.9□□□□□ -1.79
LTN1-205ENST00000483326 D2HGDHQ8N465 521 aa3.9□□□□□ -1.79
LTN1-205ENST00000483326 ATPAF2Q8N5M1 289 aa3.9□□□□□ -1.79
LTN1-205ENST00000483326 NIPA2Q8N8Q9 360 aa3.9□□□□□ -1.79
LTN1-205ENST00000483326 RASGEF1AQ8N9B8 481 aa3.9□□□□□ -1.79
LTN1-205ENST00000483326 OR5T1Q8NG75 326 aa3.9□□□□□ -1.79
LTN1-205ENST00000483326 OR2L5Q8NG80 312 aa3.9□□□□□ -1.79
LTN1-205ENST00000483326 OR6M1Q8NGM8 313 aa3.9□□□□□ -1.79
LTN1-205ENST00000483326 WDR36Q8NI36 951 aaKnown RBP3.9□□□□□ -1.79
LTN1-205ENST00000483326 BBS10Q8TAM1 723 aa3.9□□□□□ -1.79
LTN1-205ENST00000483326 NDNFQ8TB73 568 aa3.9□□□□□ -1.79
LTN1-205ENST00000483326 SFT2D1Q8WV19 159 aa3.9□□□□□ -1.79
LTN1-205ENST00000483326 NR4A3Q92570 626 aa3.9□□□□□ -1.79
LTN1-205ENST00000483326 RORBQ92753 470 aa3.9□□□□□ -1.79
LTN1-205ENST00000483326 TMEM125Q96AQ2 219 aa3.9□□□□□ -1.79
LTN1-205ENST00000483326 TCEAL4Q96EI5 215 aa3.9□□□□□ -1.79
LTN1-205ENST00000483326 VCPIP1Q96JH7 1222 aa3.9□□□□□ -1.79
LTN1-205ENST00000483326 CPXM1Q96SM3 734 aa3.9□□□□□ -1.79
LTN1-205ENST00000483326 NEU1Q99519 415 aa3.9□□□□□ -1.79
LTN1-205ENST00000483326 SEPHS2Q99611 448 aa3.9□□□□□ -1.79
LTN1-205ENST00000483326 GPA33Q99795 319 aa3.9□□□□□ -1.79
LTN1-205ENST00000483326 ASCL2Q99929 193 aa3.9□□□□□ -1.79
LTN1-205ENST00000483326 C19orf43Q9BQ61 176 aa3.9□□□□□ -1.79
LTN1-205ENST00000483326 NAT9Q9BTE0 207 aa3.9□□□□□ -1.79
LTN1-205ENST00000483326 ABHD14AQ9BUJ0 271 aa3.9□□□□□ -1.79
LTN1-205ENST00000483326 EDEM2Q9BV94 578 aa3.9□□□□□ -1.79
LTN1-205ENST00000483326 ERVK-6Q9BXR3 956 aa3.9□□□□□ -1.79
LTN1-205ENST00000483326 FRMD8P1Q9BZ68 369 aaPredicted RBP3.9□□□□□ -1.79
LTN1-205ENST00000483326 ZNF436Q9C0F3 470 aaPredicted RBP3.9□□□□□ -1.79
LTN1-205ENST00000483326 LHPPQ9H008 270 aa3.9□□□□□ -1.79
LTN1-205ENST00000483326 ANKRD19PQ9H560 264 aa3.9□□□□□ -1.79
LTN1-205ENST00000483326 LRRC4Q9HBW1 653 aa3.9□□□□□ -1.79
LTN1-205ENST00000483326 TREM2Q9NZC2 230 aa3.9□□□□□ -1.79
LTN1-205ENST00000483326 ERVK-18Q9QC07 812 aa3.9□□□□□ -1.79
LTN1-205ENST00000483326 ZNF639Q9UID6 485 aa3.9□□□□□ -1.79
LTN1-205ENST00000483326 KCNE5Q9UJ90 142 aa3.9□□□□□ -1.79
LTN1-205ENST00000483326 PURGQ9UJV8 347 aaKnown RBP3.9□□□□□ -1.79
LTN1-205ENST00000483326 POLR3HQ9Y535 204 aaPredicted RBP3.9□□□□□ -1.79
LTN1-205ENST00000483326 SBF2Q86WG5 1849 aa3.9□□□□□ -1.79
LTN1-205ENST00000483326 MYO5AQ9Y4I1 1855 aaKnown RBP3.9□□□□□ -1.79
LTN1-205ENST00000483326 ZNFX1Q9P2E3 1918 aaKnown RBP3.9□□□□□ -1.79
LTN1-205ENST00000483326 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.89□□□□□ -1.79
LTN1-205ENST00000483326 CPED1A4D0V7 1026 aa3.89□□□□□ -1.79
LTN1-205ENST00000483326 FAM149AA5PLN7 773 aa3.89□□□□□ -1.79
LTN1-205ENST00000483326 EFCAB7A8K855 629 aa3.89□□□□□ -1.79
LTN1-205ENST00000483326 FOXO6A8MYZ6 492 aa3.89□□□□□ -1.79
LTN1-205ENST00000483326 TRIM49D1C9J1S8 452 aa3.89□□□□□ -1.79
LTN1-205ENST00000483326 TMX2-CTNND1H3BSU7 103 aa3.89□□□□□ -1.79
LTN1-205ENST00000483326 K7ERQ8 282 aa3.89□□□□□ -1.79
LTN1-205ENST00000483326 PDHXO00330 501 aa3.89□□□□□ -1.79
LTN1-205ENST00000483326 GPR171O14626 319 aa3.89□□□□□ -1.79
LTN1-205ENST00000483326 PTGESO14684 152 aa3.89□□□□□ -1.79
LTN1-205ENST00000483326 ZNF197O14709 1029 aa3.89□□□□□ -1.79
LTN1-205ENST00000483326 CTDSPLO15194 276 aa3.89□□□□□ -1.79
LTN1-205ENST00000483326 CASC3O15234 703 aaKnown RBP3.89□□□□□ -1.79
LTN1-205ENST00000483326 FCGR3BO75015 233 aa3.89□□□□□ -1.79
LTN1-205ENST00000483326 VNN2O95498 520 aa3.89□□□□□ -1.79
LTN1-205ENST00000483326 CHRM5P08912 532 aaPredicted RBP3.89□□□□□ -1.79
LTN1-205ENST00000483326 RNF224P0DH78 156 aa3.89□□□□□ -1.79
LTN1-205ENST00000483326 CALCBP10092 127 aa3.89□□□□□ -1.79
LTN1-205ENST00000483326 ERVK-10P10266 1014 aa3.89□□□□□ -1.79
LTN1-205ENST00000483326 COX5BP10606 129 aa3.89□□□□□ -1.79
LTN1-205ENST00000483326 MLNP12872 115 aa3.89□□□□□ -1.79
LTN1-205ENST00000483326 NELFEP18615 380 aaKnown RBP3.89□□□□□ -1.79
LTN1-205ENST00000483326 RAB3BP20337 219 aa3.89□□□□□ -1.79
LTN1-205ENST00000483326 FASP25445 335 aa3.89□□□□□ -1.79
LTN1-205ENST00000483326 DDX6P26196 483 aaKnown RBP eCLIP3.89□□□□□ -1.79
LTN1-205ENST00000483326 CRABP1P29762 137 aa3.89□□□□□ -1.79
LTN1-205ENST00000483326 ALDH4A1P30038 563 aa3.89□□□□□ -1.79
LTN1-205ENST00000483326 HIBADHP31937 336 aaKnown RBP3.89□□□□□ -1.79
LTN1-205ENST00000483326 EPHX2P34913 555 aa3.89□□□□□ -1.79
LTN1-205ENST00000483326 RYKP34925 604 aa3.89□□□□□ -1.79
LTN1-205ENST00000483326 GPX4P36969 197 aaPredicted RBP3.89□□□□□ -1.79
LTN1-205ENST00000483326 ACTR1BP42025 376 aa3.89□□□□□ -1.79
LTN1-205ENST00000483326 GRIA3P42263 894 aa3.89□□□□□ -1.79
LTN1-205ENST00000483326 ASCL1P50553 236 aa3.89□□□□□ -1.79
LTN1-205ENST00000483326 NUDT2P50583 147 aa3.89□□□□□ -1.79
LTN1-205ENST00000483326 MLLT10P55197 1068 aa3.89□□□□□ -1.79
LTN1-205ENST00000483326 ARPP19P56211 112 aa3.89□□□□□ -1.79
LTN1-205ENST00000483326 KCNK10P57789 538 aa3.89□□□□□ -1.79
LTN1-205ENST00000483326 CD81P60033 236 aa3.89□□□□□ -1.79
LTN1-205ENST00000483326 RAB5BP61020 215 aa3.89□□□□□ -1.79
LTN1-205ENST00000483326 ABATP80404 500 aa3.89□□□□□ -1.79
LTN1-205ENST00000483326 HSF2Q03933 536 aa3.89□□□□□ -1.79
LTN1-205ENST00000483326 CSTF1Q05048 431 aaKnown RBP3.89□□□□□ -1.79
LTN1-205ENST00000483326 BIKQ13323 160 aa3.89□□□□□ -1.79
LTN1-205ENST00000483326 ZNF177Q13360 481 aaPredicted RBP3.89□□□□□ -1.79
LTN1-205ENST00000483326 SNTB2Q13425 540 aaKnown RBP3.89□□□□□ -1.79
LTN1-205ENST00000483326 ASAH1Q13510 395 aa3.89□□□□□ -1.79
LTN1-205ENST00000483326 TFDP2Q14188 446 aa3.89□□□□□ -1.79
LTN1-205ENST00000483326 HNF4GQ14541 408 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms