RNA–Protein interactions for RNA: ENST00000483275.1

VARS-226, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-226ENST00000483275 KLF4O43474 513 aa12.47□□□□□ -0.41
VARS-226ENST00000483275 PSMG1O95456 288 aa12.47□□□□□ -0.41
VARS-226ENST00000483275 SNRPAP09012 282 aaKnown RBP12.47□□□□□ -0.41
VARS-226ENST00000483275 CD8BP10966 210 aa12.47□□□□□ -0.41
VARS-226ENST00000483275 TAC1P20366 129 aa12.47□□□□□ -0.41
VARS-226ENST00000483275 TBXA2RP21731 343 aa12.47□□□□□ -0.41
VARS-226ENST00000483275 NTSP30990 170 aa12.47□□□□□ -0.41
VARS-226ENST00000483275 RNF144AP50876 292 aaPredicted RBP12.47□□□□□ -0.41
VARS-226ENST00000483275 ZNF763Q0D2J5 394 aa12.47□□□□□ -0.41
VARS-226ENST00000483275 HSPB3Q12988 150 aa12.47□□□□□ -0.41
VARS-226ENST00000483275 GANABQ14697 944 aaKnown RBP12.47□□□□□ -0.41
VARS-226ENST00000483275 SGCBQ16585 318 aa12.47□□□□□ -0.41
VARS-226ENST00000483275 DECR1Q16698 335 aa12.47□□□□□ -0.41
VARS-226ENST00000483275 ZNF704Q6ZNC4 412 aaPredicted RBP12.47□□□□□ -0.41
VARS-226ENST00000483275 FAM214BQ7L5A3 538 aa12.47□□□□□ -0.41
VARS-226ENST00000483275 ZNF551Q7Z340 670 aaPredicted RBP12.47□□□□□ -0.41
VARS-226ENST00000483275 RELL1Q8IUW5 271 aa12.47□□□□□ -0.41
VARS-226ENST00000483275 SAMD14Q8IZD0 417 aaPredicted RBP12.47□□□□□ -0.41
VARS-226ENST00000483275 METTL25Q8N6Q8 603 aa12.47□□□□□ -0.41
VARS-226ENST00000483275 AMDHD1Q96NU7 426 aa12.47□□□□□ -0.41
VARS-226ENST00000483275 TBL1XR1Q9BZK7 514 aa12.47□□□□□ -0.41
VARS-226ENST00000483275 GSTO2Q9H4Y5 243 aa12.47□□□□□ -0.41
VARS-226ENST00000483275 Q9N2J8 555 aa12.47□□□□□ -0.41
VARS-226ENST00000483275 TNFRSF12AQ9NP84 129 aa12.47□□□□□ -0.41
VARS-226ENST00000483275 MID1IP1Q9NPA3 183 aa12.47□□□□□ -0.41
VARS-226ENST00000483275 MIEF1Q9NQG6 463 aa12.47□□□□□ -0.41
VARS-226ENST00000483275 ZNF180Q9UJW8 692 aa12.47□□□□□ -0.41
VARS-226ENST00000483275 CADP27708 2225 aa12.46□□□□□ -0.41
VARS-226ENST00000483275 NTN1O95631 604 aa12.46□□□□□ -0.41
VARS-226ENST00000483275 IL33O95760 270 aa12.46□□□□□ -0.41
VARS-226ENST00000483275 ANGPTL1O95841 491 aa12.46□□□□□ -0.41
VARS-226ENST00000483275 PLGP00747 810 aaPredicted RBP12.46□□□□□ -0.41
VARS-226ENST00000483275 ATP5F1P24539 256 aaPredicted RBP12.46□□□□□ -0.41
VARS-226ENST00000483275 GABRA3P34903 492 aa12.46□□□□□ -0.41
VARS-226ENST00000483275 EEFSECP57772 596 aaKnown RBP12.46□□□□□ -0.41
VARS-226ENST00000483275 PPP2R2BQ00005 443 aa12.46□□□□□ -0.41
VARS-226ENST00000483275 ZNF844Q08AG5 666 aa12.46□□□□□ -0.41
VARS-226ENST00000483275 LCP2Q13094 533 aa12.46□□□□□ -0.41
VARS-226ENST00000483275 TSC22D1Q15714 1073 aa12.46□□□□□ -0.41
VARS-226ENST00000483275 CTU2Q2VPK5 515 aaKnown RBP12.46□□□□□ -0.41
VARS-226ENST00000483275 CYP27C1Q4G0S4 372 aa12.46□□□□□ -0.41
VARS-226ENST00000483275 FAM71E1Q6IPT2 247 aa12.46□□□□□ -0.41
VARS-226ENST00000483275 GALNT18Q6P9A2 607 aa12.46□□□□□ -0.41
VARS-226ENST00000483275 STAC2Q6ZMT1 411 aa12.46□□□□□ -0.41
VARS-226ENST00000483275 PLEKHM3Q6ZWE6 761 aa12.46□□□□□ -0.41
VARS-226ENST00000483275 SZRD1Q7Z422 152 aa12.46□□□□□ -0.41
VARS-226ENST00000483275 ZAR1Q86SH2 424 aa12.46□□□□□ -0.41
VARS-226ENST00000483275 OR2L13Q8N349 312 aa12.46□□□□□ -0.41
VARS-226ENST00000483275 CCNYL1Q8N7R7 359 aa12.46□□□□□ -0.41
VARS-226ENST00000483275 OR10D3Q8NH80 312 aa12.46□□□□□ -0.41
VARS-226ENST00000483275 IGFBPL1Q8WX77 278 aa12.46□□□□□ -0.41
VARS-226ENST00000483275 GFM2Q969S9 779 aaKnown RBP12.46□□□□□ -0.41
VARS-226ENST00000483275 CIDECQ96AQ7 238 aaPredicted RBP12.46□□□□□ -0.41
VARS-226ENST00000483275 PLPPR2Q96GM1 343 aa12.46□□□□□ -0.41
VARS-226ENST00000483275 SH3YL1Q96HL8 342 aaPredicted RBP12.46□□□□□ -0.41
VARS-226ENST00000483275 PRRG4Q9BZD6 226 aa12.46□□□□□ -0.41
VARS-226ENST00000483275 GSX2Q9BZM3 304 aa12.46□□□□□ -0.41
VARS-226ENST00000483275 SHCBP1LQ9BZQ2 653 aa12.46□□□□□ -0.41
VARS-226ENST00000483275 STMN4Q9H169 189 aaPredicted RBP12.46□□□□□ -0.41
VARS-226ENST00000483275 C12orf49Q9H741 205 aa12.46□□□□□ -0.41
VARS-226ENST00000483275 PTGES2Q9H7Z7 377 aa12.46□□□□□ -0.41
VARS-226ENST00000483275 SDHAF3Q9NRP4 125 aa12.46□□□□□ -0.41
VARS-226ENST00000483275 ABCA1O95477 2261 aa12.46□□□□□ -0.42
VARS-226ENST00000483275 CUBNO60494 3623 aa12.45□□□□□ -0.42
VARS-226ENST00000483275 A0A087WUV0 522 aaPredicted RBP12.45□□□□□ -0.42
VARS-226ENST00000483275 A0A087WV62 115 aa12.45□□□□□ -0.42
VARS-226ENST00000483275 TNFSF11O14788 317 aa12.45□□□□□ -0.42
VARS-226ENST00000483275 CXCL13O43927 109 aa12.45□□□□□ -0.42
VARS-226ENST00000483275 ENO1P06733 434 aaKnown RBP12.45□□□□□ -0.42
VARS-226ENST00000483275 FCGR2AP12318 317 aa12.45□□□□□ -0.42
VARS-226ENST00000483275 IL11P20809 199 aa12.45□□□□□ -0.42
VARS-226ENST00000483275 EFNA1P20827 205 aaPredicted RBP12.45□□□□□ -0.42
VARS-226ENST00000483275 IMPDH1P20839 514 aa12.45□□□□□ -0.42
VARS-226ENST00000483275 SHC1P29353 583 aa12.45□□□□□ -0.42
VARS-226ENST00000483275 PRKAA2P54646 552 aa12.45□□□□□ -0.42
VARS-226ENST00000483275 CTBP2P56545 445 aa12.45□□□□□ -0.42
VARS-226ENST00000483275 RPS3AP61247 264 aaKnown RBP12.45□□□□□ -0.42
VARS-226ENST00000483275 KRTAP1-1Q07627 177 aa12.45□□□□□ -0.42
VARS-226ENST00000483275 IMPG1Q17R60 797 aa12.45□□□□□ -0.42
VARS-226ENST00000483275 TMEM44Q2T9K0 475 aa12.45□□□□□ -0.42
VARS-226ENST00000483275 BEX5Q5H9J7 111 aa12.45□□□□□ -0.42
VARS-226ENST00000483275 PRSS57Q6UWY2 283 aa12.45□□□□□ -0.42
VARS-226ENST00000483275 ATG4DQ86TL0 474 aaPredicted RBP12.45□□□□□ -0.42
VARS-226ENST00000483275 ZNF619Q8N2I2 560 aa12.45□□□□□ -0.42
VARS-226ENST00000483275 RAB3IL1Q8TBN0 382 aa12.45□□□□□ -0.42
VARS-226ENST00000483275 ELP4Q96EB1 424 aa12.45□□□□□ -0.42
VARS-226ENST00000483275 EGLN2Q96KS0 407 aa12.45□□□□□ -0.42
VARS-226ENST00000483275 RNF145Q96MT1 663 aa12.45□□□□□ -0.42
VARS-226ENST00000483275 LMF2Q9BU23 707 aaKnown RBP12.45□□□□□ -0.42
VARS-226ENST00000483275 ACTR6Q9GZN1 396 aa12.45□□□□□ -0.42
VARS-226ENST00000483275 MYNNQ9NPC7 610 aa12.45□□□□□ -0.42
VARS-226ENST00000483275 EMC9Q9Y3B6 208 aa12.45□□□□□ -0.42
VARS-226ENST00000483275 AP4B1Q9Y6B7 739 aa12.45□□□□□ -0.42
VARS-226ENST00000483275 PCYT1AP49585 367 aa12.44□□□□□ -0.42
VARS-226ENST00000483275 PRKAG1P54619 331 aa12.44□□□□□ -0.42
VARS-226ENST00000483275 PKNOX1P55347 436 aa12.44□□□□□ -0.42
VARS-226ENST00000483275 ATP5J2P56134 94 aa12.44□□□□□ -0.42
VARS-226ENST00000483275 PSPHP78330 225 aa12.44□□□□□ -0.42
VARS-226ENST00000483275 TNK1Q13470 666 aa12.44□□□□□ -0.42
VARS-226ENST00000483275 CAPRIN1Q14444 709 aaKnown RBP12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms