RNA–Protein interactions for RNA: ENST00000482310.5

HDAC1-208, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-208ENST00000482310 CHDHQ8NE62 594 aaPredicted RBP12.13□□□□□ -0.47
HDAC1-208ENST00000482310 OR4C3Q8NH37 302 aa12.13□□□□□ -0.47
HDAC1-208ENST00000482310 FAM110BQ8TC76 370 aa12.13□□□□□ -0.47
HDAC1-208ENST00000482310 GRHL3Q8TE85 626 aa12.13□□□□□ -0.47
HDAC1-208ENST00000482310 ARSGQ96EG1 525 aa12.13□□□□□ -0.47
HDAC1-208ENST00000482310 HOPXQ9BPY8 73 aaPredicted RBP12.13□□□□□ -0.47
HDAC1-208ENST00000482310 OSBPL11Q9BXB4 747 aa12.13□□□□□ -0.47
HDAC1-208ENST00000482310 TBL1XR1Q9BZK7 514 aa12.13□□□□□ -0.47
HDAC1-208ENST00000482310 ZNF350Q9GZX5 532 aa12.13□□□□□ -0.47
HDAC1-208ENST00000482310 A4GALTQ9NPC4 353 aa12.13□□□□□ -0.47
HDAC1-208ENST00000482310 SPAG4Q9NPE6 437 aa12.13□□□□□ -0.47
HDAC1-208ENST00000482310 DEPPQ9NTK1 212 aa12.13□□□□□ -0.47
HDAC1-208ENST00000482310 CNOT11Q9UKZ1 510 aaKnown RBP12.13□□□□□ -0.47
HDAC1-208ENST00000482310 PCDHGB7Q9Y5F8 929 aa12.13□□□□□ -0.47
HDAC1-208ENST00000482310 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.13□□□□□ -0.47
HDAC1-208ENST00000482310 TRAV17A0A0B4J275 112 aa12.12□□□□□ -0.47
HDAC1-208ENST00000482310 PINLYPA6NC86 204 aa12.12□□□□□ -0.47
HDAC1-208ENST00000482310 FAM220BPB1ANY3 271 aa12.12□□□□□ -0.47
HDAC1-208ENST00000482310 SCDO00767 359 aa12.12□□□□□ -0.47
HDAC1-208ENST00000482310 KIAA0513O60268 411 aa12.12□□□□□ -0.47
HDAC1-208ENST00000482310 NME2P1O60361 137 aa12.12□□□□□ -0.47
HDAC1-208ENST00000482310 PDE5AO76074 875 aa12.12□□□□□ -0.47
HDAC1-208ENST00000482310 TFPTP0C1Z6 253 aa12.12□□□□□ -0.47
HDAC1-208ENST00000482310 NAGAP17050 411 aa12.12□□□□□ -0.47
HDAC1-208ENST00000482310 NME2P22392 152 aa12.12□□□□□ -0.47
HDAC1-208ENST00000482310 TCEA1P23193 301 aaKnown RBP12.12□□□□□ -0.47
HDAC1-208ENST00000482310 MSX2P35548 267 aaPredicted RBP12.12□□□□□ -0.47
HDAC1-208ENST00000482310 CPOXP36551 454 aa12.12□□□□□ -0.47
HDAC1-208ENST00000482310 MASP1P48740 699 aa12.12□□□□□ -0.47
HDAC1-208ENST00000482310 GSK3BP49841 420 aa12.12□□□□□ -0.47
HDAC1-208ENST00000482310 MEOX1P50221 254 aa12.12□□□□□ -0.47
HDAC1-208ENST00000482310 PSPHP78330 225 aa12.12□□□□□ -0.47
HDAC1-208ENST00000482310 RPP38P78345 283 aaKnown RBP12.12□□□□□ -0.47
HDAC1-208ENST00000482310 TXNL4AP83876 142 aaKnown RBP12.12□□□□□ -0.47
HDAC1-208ENST00000482310 PLGLB1Q02325 96 aa12.12□□□□□ -0.47
HDAC1-208ENST00000482310 NFATC3Q12968 1075 aa12.12□□□□□ -0.47
HDAC1-208ENST00000482310 ADRM1Q16186 407 aa12.12□□□□□ -0.47
HDAC1-208ENST00000482310 NDUFAF6Q330K2 333 aa12.12□□□□□ -0.47
HDAC1-208ENST00000482310 PLEKHN1Q494U1 663 aaPredicted RBP12.12□□□□□ -0.47
HDAC1-208ENST00000482310 C6orf89Q6UWU4 347 aa12.12□□□□□ -0.47
HDAC1-208ENST00000482310 IGFL3Q6UXB1 125 aa12.12□□□□□ -0.47
HDAC1-208ENST00000482310 BNC2Q6ZN30 1099 aaPredicted RBP12.12□□□□□ -0.47
HDAC1-208ENST00000482310 CCDC121Q6ZUS5 278 aa12.12□□□□□ -0.47
HDAC1-208ENST00000482310 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.12□□□□□ -0.47
HDAC1-208ENST00000482310 SULF2Q8IWU5 870 aa12.12□□□□□ -0.47
HDAC1-208ENST00000482310 DND1Q8IYX4 353 aaKnown RBP12.12□□□□□ -0.47
HDAC1-208ENST00000482310 TEX19Q8NA77 164 aa12.12□□□□□ -0.47
HDAC1-208ENST00000482310 GOLM1Q8NBJ4 401 aa12.12□□□□□ -0.47
HDAC1-208ENST00000482310 TMEM178AQ8NBL3 297 aa12.12□□□□□ -0.47
HDAC1-208ENST00000482310 C11orf65Q8NCR3 313 aa12.12□□□□□ -0.47
HDAC1-208ENST00000482310 OR2T12Q8NG77 320 aa12.12□□□□□ -0.47
HDAC1-208ENST00000482310 PAQR8Q8TEZ7 354 aa12.12□□□□□ -0.47
HDAC1-208ENST00000482310 ZG16BQ96DA0 208 aa12.12□□□□□ -0.47
HDAC1-208ENST00000482310 SH3YL1Q96HL8 342 aaPredicted RBP12.12□□□□□ -0.47
HDAC1-208ENST00000482310 SGCZQ96LD1 299 aa12.12□□□□□ -0.47
HDAC1-208ENST00000482310 TRNT1Q96Q11 434 aaKnown RBP12.12□□□□□ -0.47
HDAC1-208ENST00000482310 UBL7Q96S82 380 aaPredicted RBP12.12□□□□□ -0.47
HDAC1-208ENST00000482310 CDRT15Q96T59 188 aa12.12□□□□□ -0.47
HDAC1-208ENST00000482310 KCTD14Q9BQ13 255 aaPredicted RBP12.12□□□□□ -0.47
HDAC1-208ENST00000482310 TREX2Q9BQ50 279 aaPredicted RBP12.12□□□□□ -0.47
HDAC1-208ENST00000482310 DOHHQ9BU89 302 aa12.12□□□□□ -0.47
HDAC1-208ENST00000482310 RTN4RQ9BZR6 473 aa12.12□□□□□ -0.47
HDAC1-208ENST00000482310 SLC38A1Q9H2H9 487 aa12.12□□□□□ -0.47
HDAC1-208ENST00000482310 ALG2Q9H553 416 aa12.12□□□□□ -0.47
HDAC1-208ENST00000482310 THUMPD1Q9NXG2 353 aaKnown RBP12.12□□□□□ -0.47
HDAC1-208ENST00000482310 TUBA8Q9NY65 449 aaPredicted RBP12.12□□□□□ -0.47
HDAC1-208ENST00000482310 LIPT1Q9Y234 373 aa12.12□□□□□ -0.47
HDAC1-208ENST00000482310 ANGPT4Q9Y264 503 aa12.12□□□□□ -0.47
HDAC1-208ENST00000482310 B3GNT3Q9Y2A9 372 aa12.12□□□□□ -0.47
HDAC1-208ENST00000482310 KLF13Q9Y2Y9 288 aaPredicted RBP12.12□□□□□ -0.47
HDAC1-208ENST00000482310 SVILO95425 2214 aa12.12□□□□□ -0.47
HDAC1-208ENST00000482310 SPENQ96T58 3664 aaKnown RBP12.11□□□□□ -0.47
HDAC1-208ENST00000482310 TENM4Q6N022 2769 aa12.11□□□□□ -0.47
HDAC1-208ENST00000482310 CLDN24A6NM45 220 aa12.11□□□□□ -0.47
HDAC1-208ENST00000482310 FAM166BA8MTA8 275 aa12.11□□□□□ -0.47
HDAC1-208ENST00000482310 EBAG9O00559 213 aa12.11□□□□□ -0.47
HDAC1-208ENST00000482310 GSTA4O15217 222 aa12.11□□□□□ -0.47
HDAC1-208ENST00000482310 ATXN7O15265 892 aaPredicted RBP12.11□□□□□ -0.47
HDAC1-208ENST00000482310 PEX1O43933 1283 aa12.11□□□□□ -0.47
HDAC1-208ENST00000482310 CYP7B1O75881 506 aa12.11□□□□□ -0.47
HDAC1-208ENST00000482310 OPN1SWP03999 348 aa12.11□□□□□ -0.47
HDAC1-208ENST00000482310 BMP2P12643 396 aa12.11□□□□□ -0.47
HDAC1-208ENST00000482310 NCK1P16333 377 aa12.11□□□□□ -0.47
HDAC1-208ENST00000482310 PTGDSP41222 190 aa12.11□□□□□ -0.47
HDAC1-208ENST00000482310 CASP3P42574 277 aa12.11□□□□□ -0.47
HDAC1-208ENST00000482310 GZMMP51124 257 aa12.11□□□□□ -0.47
HDAC1-208ENST00000482310 MAPK14Q16539 360 aa12.11□□□□□ -0.47
HDAC1-208ENST00000482310 ZNF630Q2M218 657 aaPredicted RBP12.11□□□□□ -0.47
HDAC1-208ENST00000482310 REEP3Q6NUK4 255 aa12.11□□□□□ -0.47
HDAC1-208ENST00000482310 APOOLQ6UXV4 268 aa12.11□□□□□ -0.47
HDAC1-208ENST00000482310 LRRC74BQ6ZQY2 392 aa12.11□□□□□ -0.47
HDAC1-208ENST00000482310 Q6ZS92 163 aa12.11□□□□□ -0.47
HDAC1-208ENST00000482310 SERPINA11Q86U17 422 aa12.11□□□□□ -0.47
HDAC1-208ENST00000482310 CALHM3Q86XJ0 350 aa12.11□□□□□ -0.47
HDAC1-208ENST00000482310 VRK2Q86Y07 508 aa12.11□□□□□ -0.47
HDAC1-208ENST00000482310 MICU2Q8IYU8 434 aa12.11□□□□□ -0.47
HDAC1-208ENST00000482310 TMCO5AQ8N6Q1 288 aa12.11□□□□□ -0.47
HDAC1-208ENST00000482310 POGLUT1Q8NBL1 392 aa12.11□□□□□ -0.47
HDAC1-208ENST00000482310 HIPK4Q8NE63 616 aa12.11□□□□□ -0.47
HDAC1-208ENST00000482310 PHOSPHO1Q8TCT1 267 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms