RNA–Protein interactions for RNA: ENST00000480614.1

VEGFA-212, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 12,167 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-212ENST00000480614 DBPQ10586 325 aaPredicted RBP9.05□□□□□ -0.96
VEGFA-212ENST00000480614 CCNJQ5T5M9 372 aa9.05□□□□□ -0.96
VEGFA-212ENST00000480614 TPRA1Q86W33 373 aa9.05□□□□□ -0.96
VEGFA-212ENST00000480614 ECHDC3Q96DC8 303 aa9.05□□□□□ -0.96
VEGFA-212ENST00000480614 FAM46AQ96IP4 442 aaKnown RBP9.05□□□□□ -0.96
VEGFA-212ENST00000480614 HCAR1Q9BXC0 346 aa9.05□□□□□ -0.96
VEGFA-212ENST00000480614 ENKD1Q9H0I2 346 aa9.05□□□□□ -0.96
VEGFA-212ENST00000480614 PLSCR5A0PG75 271 aa9.05□□□□□ -0.96
VEGFA-212ENST00000480614 CD8B2A6NJW9 211 aa9.05□□□□□ -0.96
VEGFA-212ENST00000480614 MAS1P04201 325 aa9.05□□□□□ -0.96
VEGFA-212ENST00000480614 CD8BP10966 210 aa9.05□□□□□ -0.96
VEGFA-212ENST00000480614 BMP4P12644 408 aa9.05□□□□□ -0.96
VEGFA-212ENST00000480614 ELK4P28324 431 aa9.05□□□□□ -0.96
VEGFA-212ENST00000480614 PTH2RP49190 550 aa9.05□□□□□ -0.96
VEGFA-212ENST00000480614 OGDHQ02218 1023 aa9.05□□□□□ -0.96
VEGFA-212ENST00000480614 MPEG1Q2M385 716 aa9.05□□□□□ -0.96
VEGFA-212ENST00000480614 RTL10Q7L3V2 364 aa9.05□□□□□ -0.96
VEGFA-212ENST00000480614 KCTD20Q7Z5Y7 419 aa9.05□□□□□ -0.96
VEGFA-212ENST00000480614 KLBQ86Z14 1044 aa9.05□□□□□ -0.96
VEGFA-212ENST00000480614 TTTY10Q9BZA0 68 aa9.05□□□□□ -0.96
VEGFA-212ENST00000480614 FTSJ1Q9UET6 329 aa9.05□□□□□ -0.96
VEGFA-212ENST00000480614 COCHO43405 550 aa9.05□□□□□ -0.96
VEGFA-212ENST00000480614 GAAP10253 952 aa9.05□□□□□ -0.96
VEGFA-212ENST00000480614 IL4RP24394 825 aa9.05□□□□□ -0.96
VEGFA-212ENST00000480614 MEF2AQ02078 507 aaPredicted RBP9.05□□□□□ -0.96
VEGFA-212ENST00000480614 GPR176Q14439 515 aa9.05□□□□□ -0.96
VEGFA-212ENST00000480614 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.05□□□□□ -0.963e-13■■□□□ 13.7
VEGFA-212ENST00000480614 ZDHHC1Q8WTX9 485 aa9.05□□□□□ -0.96
VEGFA-212ENST00000480614 RBCK1Q9BYM8 510 aa9.05□□□□□ -0.96
VEGFA-212ENST00000480614 PKDREJQ9NTG1 2253 aa9.05□□□□□ -0.96
VEGFA-212ENST00000480614 MEN1O00255 615 aa9.05□□□□□ -0.96
VEGFA-212ENST00000480614 GGT1P19440 569 aa9.05□□□□□ -0.96
VEGFA-212ENST00000480614 KDELR2P33947 212 aa9.05□□□□□ -0.96
VEGFA-212ENST00000480614 FOLR3P41439 243 aa9.05□□□□□ -0.96
VEGFA-212ENST00000480614 ZNF92Q03936 586 aa9.05□□□□□ -0.96
VEGFA-212ENST00000480614 OR10Q1Q8NGQ4 319 aa9.05□□□□□ -0.96
VEGFA-212ENST00000480614 TAAR8Q969N4 342 aa9.05□□□□□ -0.96
VEGFA-212ENST00000480614 SLC25A31Q9H0C2 315 aa9.05□□□□□ -0.96
VEGFA-212ENST00000480614 SPHK2Q9NRA0 654 aa9.05□□□□□ -0.96
VEGFA-212ENST00000480614 A0A0D9SEW6 157 aa9.04□□□□□ -0.96
VEGFA-212ENST00000480614 HTD2P86397 168 aa9.04□□□□□ -0.96
VEGFA-212ENST00000480614 MSMO1Q15800 293 aa9.04□□□□□ -0.96
VEGFA-212ENST00000480614 SFT2D3Q587I9 215 aa9.04□□□□□ -0.96
VEGFA-212ENST00000480614 XKR5Q6UX68 686 aa9.04□□□□□ -0.96
VEGFA-212ENST00000480614 CCBE1Q6UXH8 406 aaPredicted RBP9.04□□□□□ -0.96
VEGFA-212ENST00000480614 OR6C4Q8NGE1 309 aa9.04□□□□□ -0.96
VEGFA-212ENST00000480614 GPR148Q8TDV2 347 aa9.04□□□□□ -0.96
VEGFA-212ENST00000480614 ZNF578Q96N58 590 aaPredicted RBP9.04□□□□□ -0.96
VEGFA-212ENST00000480614 ZNF160Q9HCG1 818 aa9.04□□□□□ -0.96
VEGFA-212ENST00000480614 KCNJ16Q9NPI9 418 aa9.04□□□□□ -0.96
VEGFA-212ENST00000480614 B3GALT1Q9Y5Z6 326 aa9.04□□□□□ -0.96
VEGFA-212ENST00000480614 DOC2AQ14183 400 aa9.04□□□□□ -0.96
VEGFA-212ENST00000480614 CD300LGQ6UXG3 332 aa9.04□□□□□ -0.96
VEGFA-212ENST00000480614 ADAMTS16Q8TE57 1224 aa9.04□□□□□ -0.96
VEGFA-212ENST00000480614 C7orf43Q8WVR3 580 aa9.04□□□□□ -0.96
VEGFA-212ENST00000480614 CCDC106Q9BWC9 280 aa9.04□□□□□ -0.96
VEGFA-212ENST00000480614 SCN5AQ14524 2016 aa9.04□□□□□ -0.96
VEGFA-212ENST00000480614 CPT2P23786 658 aa9.04□□□□□ -0.96
VEGFA-212ENST00000480614 TAS2R30P59541 319 aa9.04□□□□□ -0.96
VEGFA-212ENST00000480614 PROX2Q3B8N5 592 aa9.04□□□□□ -0.96
VEGFA-212ENST00000480614 METTL27Q8N6F8 245 aaPredicted RBP9.04□□□□□ -0.96
VEGFA-212ENST00000480614 RGS6P49758 472 aa9.04□□□□□ -0.96
VEGFA-212ENST00000480614 ZNF136P52737 540 aa9.04□□□□□ -0.96
VEGFA-212ENST00000480614 GALNT1Q10472 559 aaPredicted RBP9.04□□□□□ -0.96
VEGFA-212ENST00000480614 GPR50Q13585 617 aa9.04□□□□□ -0.96
VEGFA-212ENST00000480614 SLC14A2Q15849 920 aa9.04□□□□□ -0.96
VEGFA-212ENST00000480614 GATSQ8NAP1 163 aa9.04□□□□□ -0.96
VEGFA-212ENST00000480614 OR14L1PQ8NHC6 308 aa9.04□□□□□ -0.96
VEGFA-212ENST00000480614 UBXN10Q96LJ8 280 aa9.04□□□□□ -0.96
VEGFA-212ENST00000480614 B3GNT3Q9Y2A9 372 aa9.04□□□□□ -0.96
VEGFA-212ENST00000480614 ATG4BQ9Y4P1 393 aa9.04□□□□□ -0.96
VEGFA-212ENST00000480614 PCDHA9Q9Y5H5 950 aa9.04□□□□□ -0.96
VEGFA-212ENST00000480614 IGLON5A6NGN9 336 aa9.04□□□□□ -0.96
VEGFA-212ENST00000480614 BLOC1S1P78537 153 aa9.04□□□□□ -0.96
VEGFA-212ENST00000480614 SRPXP78539 464 aa9.04□□□□□ -0.96
VEGFA-212ENST00000480614 OR4K15Q8NH41 348 aa9.04□□□□□ -0.96
VEGFA-212ENST00000480614 AUTS2Q8WXX7 1259 aa9.04□□□□□ -0.96
VEGFA-212ENST00000480614 SLC41A3Q96GZ6 507 aa9.04□□□□□ -0.96
VEGFA-212ENST00000480614 OTX2P32243 289 aa9.04□□□□□ -0.96
VEGFA-212ENST00000480614 SPINT3P49223 89 aa9.04□□□□□ -0.96
VEGFA-212ENST00000480614 PPP1R3AQ16821 1122 aa9.04□□□□□ -0.96
VEGFA-212ENST00000480614 EEF1A1P5Q5VTE0 462 aa9.04□□□□□ -0.96
VEGFA-212ENST00000480614 FAM118AQ9NWS6 357 aa9.04□□□□□ -0.96
VEGFA-212ENST00000480614 BCAS1O75363 584 aaPredicted RBP9.04□□□□□ -0.96
VEGFA-212ENST00000480614 RHOP08100 348 aa9.04□□□□□ -0.96
VEGFA-212ENST00000480614 IDH3GP51553 393 aaPredicted RBP9.04□□□□□ -0.96
VEGFA-212ENST00000480614 TWNKQ96RR1 684 aa9.04□□□□□ -0.96
VEGFA-212ENST00000480614 PEBP4Q96S96 227 aa9.04□□□□□ -0.96
VEGFA-212ENST00000480614 INTS14Q96SY0 518 aa9.04□□□□□ -0.96
VEGFA-212ENST00000480614 DNAJB11Q9UBS4 358 aa9.04□□□□□ -0.96
VEGFA-212ENST00000480614 SLC22A7Q9Y694 548 aa9.04□□□□□ -0.96
VEGFA-212ENST00000480614 KIF13BQ9NQT8 1826 aa9.04□□□□□ -0.96
VEGFA-212ENST00000480614 AKAIN1P0CW23 69 aa9.04□□□□□ -0.96
VEGFA-212ENST00000480614 STK19P49842 368 aaPredicted RBP9.04□□□□□ -0.96
VEGFA-212ENST00000480614 SKA3Q8IX90 412 aa9.04□□□□□ -0.96
VEGFA-212ENST00000480614 OR6T1Q8NGN1 323 aa9.04□□□□□ -0.96
VEGFA-212ENST00000480614 OR13J1Q8NGT2 312 aa9.04□□□□□ -0.96
VEGFA-212ENST00000480614 ZFAND1Q8TCF1 268 aa9.04□□□□□ -0.96
VEGFA-212ENST00000480614 F8W036 122 aa9.04□□□□□ -0.96
VEGFA-212ENST00000480614 TSTD3H0UI37 97 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms