RNA–Protein interactions for RNA: ENST00000480057.1

VTI1A-204, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-204ENST00000480057 RAPSNQ13702 412 aa10.2□□□□□ -0.78
VTI1A-204ENST00000480057 FGFBP1Q14512 234 aa10.2□□□□□ -0.78
VTI1A-204ENST00000480057 SEC23BQ15437 767 aa10.2□□□□□ -0.78
VTI1A-204ENST00000480057 NSDHLQ15738 373 aa10.2□□□□□ -0.78
VTI1A-204ENST00000480057 MAPK14Q16539 360 aa10.2□□□□□ -0.78
VTI1A-204ENST00000480057 ENTPD8Q5MY95 495 aa10.2□□□□□ -0.78
VTI1A-204ENST00000480057 MRPL2Q5T653 305 aaKnown RBP10.2□□□□□ -0.78
VTI1A-204ENST00000480057 PHF19Q5T6S3 580 aa10.2□□□□□ -0.78
VTI1A-204ENST00000480057 MFSD4BQ5TF39 518 aa10.2□□□□□ -0.78
VTI1A-204ENST00000480057 C1orf189Q5VU69 101 aa10.2□□□□□ -0.78
VTI1A-204ENST00000480057 PWWP2BQ6NUJ5 590 aa10.2□□□□□ -0.78
VTI1A-204ENST00000480057 C1orf94Q6P1W5 598 aa10.2□□□□□ -0.78
VTI1A-204ENST00000480057 BORAQ6PGQ7 559 aa10.2□□□□□ -0.78
VTI1A-204ENST00000480057 FIGNL1Q6PIW4 674 aa10.2□□□□□ -0.78
VTI1A-204ENST00000480057 ZNF773Q6PK81 442 aa10.2□□□□□ -0.78
VTI1A-204ENST00000480057 PLEKHM3Q6ZWE6 761 aa10.2□□□□□ -0.78
VTI1A-204ENST00000480057 OVCH1Q7RTY7 1134 aa10.2□□□□□ -0.78
VTI1A-204ENST00000480057 ZNF550Q7Z398 422 aa10.2□□□□□ -0.78
VTI1A-204ENST00000480057 BMPERQ8N8U9 685 aa10.2□□□□□ -0.78
VTI1A-204ENST00000480057 RCBTB1Q8NDN9 531 aa10.2□□□□□ -0.78
VTI1A-204ENST00000480057 STT3BQ8TCJ2 826 aa10.2□□□□□ -0.78
VTI1A-204ENST00000480057 SLC2A12Q8TD20 617 aa10.2□□□□□ -0.78
VTI1A-204ENST00000480057 DOK4Q8TEW6 326 aa10.2□□□□□ -0.78
VTI1A-204ENST00000480057 ZNF721Q8TF20 911 aa10.2□□□□□ -0.78
VTI1A-204ENST00000480057 ACOT11Q8WXI4 607 aaPredicted RBP10.2□□□□□ -0.78
VTI1A-204ENST00000480057 TSLPQ969D9 159 aa10.2□□□□□ -0.78
VTI1A-204ENST00000480057 CLIP3Q96DZ5 547 aa10.2□□□□□ -0.78
VTI1A-204ENST00000480057 SCN2AQ99250 2005 aa10.2□□□□□ -0.78
VTI1A-204ENST00000480057 MCHR1Q99705 422 aa10.2□□□□□ -0.78
VTI1A-204ENST00000480057 NIPSNAP1Q9BPW8 284 aa10.2□□□□□ -0.78
VTI1A-204ENST00000480057 ZNF559Q9BR84 538 aa10.2□□□□□ -0.78
VTI1A-204ENST00000480057 ITPAQ9BY32 194 aa10.2□□□□□ -0.78
VTI1A-204ENST00000480057 VN1R1Q9GZP7 353 aa10.2□□□□□ -0.78
VTI1A-204ENST00000480057 KRCC1Q9NPI7 259 aaPredicted RBP10.2□□□□□ -0.78
VTI1A-204ENST00000480057 FBXO8Q9NRD0 319 aa10.2□□□□□ -0.78
VTI1A-204ENST00000480057 SLC22A11Q9NSA0 550 aa10.2□□□□□ -0.78
VTI1A-204ENST00000480057 RHCGQ9UBD6 479 aa10.2□□□□□ -0.78
VTI1A-204ENST00000480057 COPS7AQ9UBW8 275 aa10.2□□□□□ -0.78
VTI1A-204ENST00000480057 FTSJ1Q9UET6 329 aa10.2□□□□□ -0.78
VTI1A-204ENST00000480057 KCNE5Q9UJ90 142 aa10.2□□□□□ -0.78
VTI1A-204ENST00000480057 NXT1Q9UKK6 140 aaKnown RBP10.2□□□□□ -0.78
VTI1A-204ENST00000480057 MKL2Q9ULH7 1088 aa10.2□□□□□ -0.78
VTI1A-204ENST00000480057 PPIEQ9UNP9 301 aaKnown RBP10.2□□□□□ -0.78
VTI1A-204ENST00000480057 ZDBF2Q9HCK1 2354 aa10.19□□□□□ -0.78
VTI1A-204ENST00000480057 TRAPPC13A5PLN9 417 aa10.19□□□□□ -0.78
VTI1A-204ENST00000480057 ZAR1LA6NP61 321 aa10.19□□□□□ -0.78
VTI1A-204ENST00000480057 B4E171 279 aa10.19□□□□□ -0.78
VTI1A-204ENST00000480057 TPST2O60704 377 aa10.19□□□□□ -0.78
VTI1A-204ENST00000480057 CPNE3O75131 537 aaKnown RBP10.19□□□□□ -0.78
VTI1A-204ENST00000480057 IL33O95760 270 aa10.19□□□□□ -0.78
VTI1A-204ENST00000480057 IGKV1D-16P01601 117 aa10.19□□□□□ -0.78
VTI1A-204ENST00000480057 ZGLP1P0C6A0 271 aa10.19□□□□□ -0.78
VTI1A-204ENST00000480057 CYP4B1P13584 511 aa10.19□□□□□ -0.78
VTI1A-204ENST00000480057 AGXTP21549 392 aa10.19□□□□□ -0.78
VTI1A-204ENST00000480057 ELK4P28324 431 aa10.19□□□□□ -0.78
VTI1A-204ENST00000480057 TTKP33981 857 aa10.19□□□□□ -0.78
VTI1A-204ENST00000480057 TSPAN7P41732 249 aa10.19□□□□□ -0.78
VTI1A-204ENST00000480057 CRISP1P54107 249 aa10.19□□□□□ -0.78
VTI1A-204ENST00000480057 MAD2L1BPQ15013 274 aaPredicted RBP10.19□□□□□ -0.78
VTI1A-204ENST00000480057 LPAL2Q16609 132 aa10.19□□□□□ -0.78
VTI1A-204ENST00000480057 VWA2Q5GFL6 755 aa10.19□□□□□ -0.78
VTI1A-204ENST00000480057 ZNF613Q6PF04 617 aa10.19□□□□□ -0.78
VTI1A-204ENST00000480057 KLHL17Q6TDP4 642 aa10.19□□□□□ -0.78
VTI1A-204ENST00000480057 ZNF440Q8IYI8 595 aa10.19□□□□□ -0.78
VTI1A-204ENST00000480057 RNF113BQ8IZP6 322 aaKnown RBP10.19□□□□□ -0.78
VTI1A-204ENST00000480057 BCORP1Q8N888 145 aa10.19□□□□□ -0.78
VTI1A-204ENST00000480057 ZSCAN1Q8NBB4 408 aa10.19□□□□□ -0.78
VTI1A-204ENST00000480057 OR4K5Q8NGD3 323 aa10.19□□□□□ -0.78
VTI1A-204ENST00000480057 OR1N1Q8NGS0 311 aa10.19□□□□□ -0.78
VTI1A-204ENST00000480057 GNPDA2Q8TDQ7 276 aa10.19□□□□□ -0.78
VTI1A-204ENST00000480057 SLC41A3Q96GZ6 507 aa10.19□□□□□ -0.78
VTI1A-204ENST00000480057 LCORQ96JN0 433 aaPredicted RBP10.19□□□□□ -0.78
VTI1A-204ENST00000480057 WDR54Q9H977 334 aa10.19□□□□□ -0.78
VTI1A-204ENST00000480057 FBXO34Q9NWN3 711 aa10.19□□□□□ -0.78
VTI1A-204ENST00000480057 AKAP7Q9P0M2 348 aaPredicted RBP10.19□□□□□ -0.78
VTI1A-204ENST00000480057 REV1Q9UBZ9 1251 aa10.19□□□□□ -0.78
VTI1A-204ENST00000480057 SLC35A3Q9Y2D2 325 aa10.19□□□□□ -0.78
VTI1A-204ENST00000480057 TPRKBQ9Y3C4 175 aa10.19□□□□□ -0.78
VTI1A-204ENST00000480057 OR10H1Q9Y4A9 318 aa10.19□□□□□ -0.78
VTI1A-204ENST00000480057 PCDHGA6Q9Y5G7 932 aa10.19□□□□□ -0.78
VTI1A-204ENST00000480057 SDK1Q7Z5N4 2213 aa10.19□□□□□ -0.78
VTI1A-204ENST00000480057 SPTBP11277 2137 aa10.19□□□□□ -0.78
VTI1A-204ENST00000480057 CENPVL1A0A0U1RR11 272 aa10.18□□□□□ -0.78
VTI1A-204ENST00000480057 LNP1A1A4G5 178 aa10.18□□□□□ -0.78
VTI1A-204ENST00000480057 OR2W5A6NFC9 320 aa10.18□□□□□ -0.78
VTI1A-204ENST00000480057 CPSF4LA6NMK7 179 aaKnown RBP10.18□□□□□ -0.78
VTI1A-204ENST00000480057 EFCAB7A8K855 629 aa10.18□□□□□ -0.78
VTI1A-204ENST00000480057 SLC1A7O00341 560 aa10.18□□□□□ -0.78
VTI1A-204ENST00000480057 PEX12O00623 359 aa10.18□□□□□ -0.78
VTI1A-204ENST00000480057 TIAF1O95411 115 aa10.18□□□□□ -0.78
VTI1A-204ENST00000480057 ANGPTL1O95841 491 aa10.18□□□□□ -0.78
VTI1A-204ENST00000480057 ZNF806P0C7X5 589 aa10.18□□□□□ -0.78
VTI1A-204ENST00000480057 ENDOUP21128 410 aaKnown RBP10.18□□□□□ -0.78
VTI1A-204ENST00000480057 CHMP24386 653 aa10.18□□□□□ -0.78
VTI1A-204ENST00000480057 GSSP48637 474 aa10.18□□□□□ -0.78
VTI1A-204ENST00000480057 E2F1Q01094 437 aa10.18□□□□□ -0.78
VTI1A-204ENST00000480057 TARDBPQ13148 414 aaKnown RBP eCLIP10.18□□□□□ -0.78
VTI1A-204ENST00000480057 COL9A2Q14055 689 aaPredicted RBP10.18□□□□□ -0.78
VTI1A-204ENST00000480057 EBPQ15125 230 aaKnown RBP10.18□□□□□ -0.78
VTI1A-204ENST00000480057 MEP1AQ16819 746 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms