RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 MBL2P11226 248 aaPredicted RBP3.29□□□□□ -1.88
CDC42BPA-212ENST00000478573 MAGEA4P43358 317 aa3.29□□□□□ -1.88
CDC42BPA-212ENST00000478573 MTIF2P46199 727 aaKnown RBP3.29□□□□□ -1.88
CDC42BPA-212ENST00000478573 TKTL1P51854 596 aa3.29□□□□□ -1.88
CDC42BPA-212ENST00000478573 ACLYP53396 1101 aa3.29□□□□□ -1.88
CDC42BPA-212ENST00000478573 GMFBP60983 142 aa3.29□□□□□ -1.88
CDC42BPA-212ENST00000478573 FKBP3Q00688 224 aaKnown RBP3.29□□□□□ -1.88
CDC42BPA-212ENST00000478573 CNTN2Q02246 1040 aa3.29□□□□□ -1.88
CDC42BPA-212ENST00000478573 SNX1Q13596 522 aa3.29□□□□□ -1.88
CDC42BPA-212ENST00000478573 FASTKQ14296 549 aaKnown RBP3.29□□□□□ -1.88
CDC42BPA-212ENST00000478573 PDIA5Q14554 519 aa3.29□□□□□ -1.88
CDC42BPA-212ENST00000478573 TRADDQ15628 312 aa3.29□□□□□ -1.88
CDC42BPA-212ENST00000478573 CARTPTQ16568 116 aa3.29□□□□□ -1.88
CDC42BPA-212ENST00000478573 HAGHQ16775 308 aa3.29□□□□□ -1.88
CDC42BPA-212ENST00000478573 ZSWIM7Q19AV6 140 aa3.29□□□□□ -1.88
CDC42BPA-212ENST00000478573 MS4A18Q3C1V0 323 aa3.29□□□□□ -1.88
CDC42BPA-212ENST00000478573 USH1GQ495M9 461 aa3.29□□□□□ -1.88
CDC42BPA-212ENST00000478573 CMPK2Q5EBM0 449 aa3.29□□□□□ -1.88
CDC42BPA-212ENST00000478573 LCE3EQ5T5B0 92 aa3.29□□□□□ -1.88
CDC42BPA-212ENST00000478573 DCAF12Q5T6F0 453 aa3.29□□□□□ -1.88
CDC42BPA-212ENST00000478573 ZCCHC12Q6PEW1 402 aa3.29□□□□□ -1.88
CDC42BPA-212ENST00000478573 METTL7BQ6UX53 244 aa3.29□□□□□ -1.88
CDC42BPA-212ENST00000478573 CATSPER4Q7RTX7 472 aa3.29□□□□□ -1.88
CDC42BPA-212ENST00000478573 SYVN1Q86TM6 617 aa3.29□□□□□ -1.88
CDC42BPA-212ENST00000478573 FBXO16Q8IX29 292 aaPredicted RBP3.29□□□□□ -1.88
CDC42BPA-212ENST00000478573 FBXL16Q8N461 479 aa3.29□□□□□ -1.88
CDC42BPA-212ENST00000478573 AQP11Q8NBQ7 271 aa3.29□□□□□ -1.88
CDC42BPA-212ENST00000478573 MINDY2Q8NBR6 621 aa3.29□□□□□ -1.88
CDC42BPA-212ENST00000478573 FAM71CQ8NEG0 241 aa3.29□□□□□ -1.88
CDC42BPA-212ENST00000478573 LRRC15Q8TF66 581 aa3.29□□□□□ -1.88
CDC42BPA-212ENST00000478573 MOCOSQ96EN8 888 aa3.29□□□□□ -1.88
CDC42BPA-212ENST00000478573 C16orf58Q96GQ5 468 aa3.29□□□□□ -1.88
CDC42BPA-212ENST00000478573 ACCSQ96QU6 501 aa3.29□□□□□ -1.88
CDC42BPA-212ENST00000478573 RBM4BQ9BQ04 359 aaKnown RBP3.29□□□□□ -1.88
CDC42BPA-212ENST00000478573 SYT11Q9BT88 431 aa3.29□□□□□ -1.88
CDC42BPA-212ENST00000478573 FAM124BQ9H5Z6 455 aaPredicted RBP3.29□□□□□ -1.88
CDC42BPA-212ENST00000478573 PXMP2Q9NR77 195 aa3.29□□□□□ -1.88
CDC42BPA-212ENST00000478573 RBM28Q9NW13 759 aaKnown RBP3.29□□□□□ -1.88
CDC42BPA-212ENST00000478573 SOHLH2Q9NX45 425 aa3.29□□□□□ -1.88
CDC42BPA-212ENST00000478573 THYN1Q9P016 225 aa3.29□□□□□ -1.88
CDC42BPA-212ENST00000478573 THEGQ9P2T0 379 aa3.29□□□□□ -1.88
CDC42BPA-212ENST00000478573 THAP10Q9P2Z0 257 aaPredicted RBP3.29□□□□□ -1.88
CDC42BPA-212ENST00000478573 LHX3Q9UBR4 397 aa3.29□□□□□ -1.88
CDC42BPA-212ENST00000478573 TBX21Q9UL17 535 aa3.29□□□□□ -1.88
CDC42BPA-212ENST00000478573 PLA2G4CQ9UP65 541 aa3.29□□□□□ -1.88
CDC42BPA-212ENST00000478573 ENTPD4Q9Y227 616 aa3.29□□□□□ -1.88
CDC42BPA-212ENST00000478573 ATG4BQ9Y4P1 393 aa3.29□□□□□ -1.88
CDC42BPA-212ENST00000478573 BRWD1Q9NSI6 2320 aa3.28□□□□□ -1.88
CDC42BPA-212ENST00000478573 TRANK1O15050 2925 aa3.28□□□□□ -1.88
CDC42BPA-212ENST00000478573 ARHGEF33A8MVX0 844 aa3.28□□□□□ -1.88
CDC42BPA-212ENST00000478573 TMCO5BA8MYB1 307 aa3.28□□□□□ -1.88
CDC42BPA-212ENST00000478573 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.28□□□□□ -1.88
CDC42BPA-212ENST00000478573 EPM2AB3EWF7 344 aa3.28□□□□□ -1.88
CDC42BPA-212ENST00000478573 E9PQ18 207 aa3.28□□□□□ -1.88
CDC42BPA-212ENST00000478573 K7EQG2 157 aa3.28□□□□□ -1.88
CDC42BPA-212ENST00000478573 FBP2O00757 339 aa3.28□□□□□ -1.88
CDC42BPA-212ENST00000478573 DCXO43602 365 aa3.28□□□□□ -1.88
CDC42BPA-212ENST00000478573 CYTH3O43739 400 aa3.28□□□□□ -1.88
CDC42BPA-212ENST00000478573 PGK1P00558 417 aa3.28□□□□□ -1.88
CDC42BPA-212ENST00000478573 IGHG1P01857 330 aa3.28□□□□□ -1.88
CDC42BPA-212ENST00000478573 PTMAP06454 111 aaKnown RBP3.28□□□□□ -1.88
CDC42BPA-212ENST00000478573 GOLGA8HP0CJ92 632 aa3.28□□□□□ -1.88
CDC42BPA-212ENST00000478573 ADORA3P0DMS8 318 aa3.28□□□□□ -1.88
CDC42BPA-212ENST00000478573 GHRP10912 638 aa3.28□□□□□ -1.88
CDC42BPA-212ENST00000478573 GP9P14770 177 aa3.28□□□□□ -1.88
CDC42BPA-212ENST00000478573 GNSP15586 552 aa3.28□□□□□ -1.88
CDC42BPA-212ENST00000478573 PTMSP20962 102 aa3.28□□□□□ -1.88
CDC42BPA-212ENST00000478573 CALML3P27482 149 aa3.28□□□□□ -1.88
CDC42BPA-212ENST00000478573 PRDX6P30041 224 aa3.28□□□□□ -1.88
CDC42BPA-212ENST00000478573 MAT2AP31153 395 aaKnown RBP3.28□□□□□ -1.88
CDC42BPA-212ENST00000478573 CHRNA3P32297 505 aa3.28□□□□□ -1.88
CDC42BPA-212ENST00000478573 RFC2P35250 354 aa3.28□□□□□ -1.88
CDC42BPA-212ENST00000478573 SLC1A6P48664 564 aa3.28□□□□□ -1.88
CDC42BPA-212ENST00000478573 ZNF131P52739 623 aa3.28□□□□□ -1.88
CDC42BPA-212ENST00000478573 RPS27AP62979 156 aaKnown RBP3.28□□□□□ -1.88
CDC42BPA-212ENST00000478573 SRPXP78539 464 aa3.28□□□□□ -1.88
CDC42BPA-212ENST00000478573 MYBPC1Q00872 1141 aa3.28□□□□□ -1.88
CDC42BPA-212ENST00000478573 NME3Q13232 169 aa3.28□□□□□ -1.88
CDC42BPA-212ENST00000478573 DPYSQ14117 519 aa3.28□□□□□ -1.88
CDC42BPA-212ENST00000478573 ZNF146Q15072 292 aa3.28□□□□□ -1.88
CDC42BPA-212ENST00000478573 CLPPQ16740 277 aaPredicted RBP3.28□□□□□ -1.88
CDC42BPA-212ENST00000478573 AGKQ53H12 422 aa3.28□□□□□ -1.88
CDC42BPA-212ENST00000478573 FAM182AQ5T1J6 154 aa3.28□□□□□ -1.88
CDC42BPA-212ENST00000478573 RAET1GQ6H3X3 334 aa3.28□□□□□ -1.88
CDC42BPA-212ENST00000478573 IRGCQ6NXR0 463 aa3.28□□□□□ -1.88
CDC42BPA-212ENST00000478573 ASRGL1Q7L266 308 aa3.28□□□□□ -1.88
CDC42BPA-212ENST00000478573 KCNMB4Q86W47 210 aa3.28□□□□□ -1.88
CDC42BPA-212ENST00000478573 PHC2Q8IXK0 858 aa3.28□□□□□ -1.88
CDC42BPA-212ENST00000478573 LMNTD2Q8IXW0 634 aa3.28□□□□□ -1.88
CDC42BPA-212ENST00000478573 TEX9Q8N6V9 391 aa3.28□□□□□ -1.88
CDC42BPA-212ENST00000478573 ICA1LQ8NDH6 482 aa3.28□□□□□ -1.88
CDC42BPA-212ENST00000478573 CHDHQ8NE62 594 aaPredicted RBP3.28□□□□□ -1.88
CDC42BPA-212ENST00000478573 PCNPQ8WW12 178 aaKnown RBP3.28□□□□□ -1.88
CDC42BPA-212ENST00000478573 TMEM37Q8WXS4 190 aa3.28□□□□□ -1.88
CDC42BPA-212ENST00000478573 TAF4BQ92750 862 aa3.28□□□□□ -1.88
CDC42BPA-212ENST00000478573 NABP1Q96AH0 204 aa3.28□□□□□ -1.88
CDC42BPA-212ENST00000478573 TBC1D31Q96DN5 1066 aa3.28□□□□□ -1.88
CDC42BPA-212ENST00000478573 MTG1Q9BT17 334 aaPredicted RBP3.28□□□□□ -1.88
CDC42BPA-212ENST00000478573 RAB17Q9H0T7 212 aa3.28□□□□□ -1.88
CDC42BPA-212ENST00000478573 GLT8D2Q9H1C3 349 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms