RNA–Protein interactions for RNA: ENST00000477983.1

LMBR1-216, Transcript of limb development membrane protein 1, humanhuman

TSL 2

Gene LMBR1, Length 605 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-216ENST00000477983 STPG1Q5TH74 334 aa4.23□□□□□ -1.73
LMBR1-216ENST00000477983 MARC1Q5VT66 337 aa4.23□□□□□ -1.73
LMBR1-216ENST00000477983 SDHAF4Q5VUM1 108 aa4.23□□□□□ -1.73
LMBR1-216ENST00000477983 ZNF280DQ6N043 979 aa4.23□□□□□ -1.73
LMBR1-216ENST00000477983 CES5AQ6NT32 575 aa4.23□□□□□ -1.73
LMBR1-216ENST00000477983 FUT10Q6P4F1 479 aa4.23□□□□□ -1.73
LMBR1-216ENST00000477983 KDELC1Q6UW63 502 aa4.23□□□□□ -1.73
LMBR1-216ENST00000477983 PRSS55Q6UWB4 352 aaPredicted RBP4.23□□□□□ -1.73
LMBR1-216ENST00000477983 DLEU7Q6UYE1 221 aa4.23□□□□□ -1.73
LMBR1-216ENST00000477983 CYHR1Q6ZMK1 362 aa4.23□□□□□ -1.73
LMBR1-216ENST00000477983 PIWIL3Q7Z3Z3 882 aaKnown RBP4.23□□□□□ -1.73
LMBR1-216ENST00000477983 TMCO2Q7Z6W1 182 aaPredicted RBP4.23□□□□□ -1.73
LMBR1-216ENST00000477983 MFSD6LQ8IWD5 586 aa4.23□□□□□ -1.73
LMBR1-216ENST00000477983 KIAA2013Q8IYS2 634 aa4.23□□□□□ -1.73
LMBR1-216ENST00000477983 CPXM2Q8N436 756 aa4.23□□□□□ -1.73
LMBR1-216ENST00000477983 C1orf52Q8N6N3 182 aaKnown RBP4.23□□□□□ -1.73
LMBR1-216ENST00000477983 RTL3Q8N8U3 475 aaKnown RBP4.23□□□□□ -1.73
LMBR1-216ENST00000477983 LSM14AQ8ND56 463 aaKnown RBP4.23□□□□□ -1.73
LMBR1-216ENST00000477983 IPMKQ8NFU5 416 aa4.23□□□□□ -1.73
LMBR1-216ENST00000477983 OR2T12Q8NG77 320 aa4.23□□□□□ -1.73
LMBR1-216ENST00000477983 OR4L1Q8NH43 312 aa4.23□□□□□ -1.73
LMBR1-216ENST00000477983 SLC38A4Q969I6 547 aa4.23□□□□□ -1.73
LMBR1-216ENST00000477983 ZHX1-C8orf76Q96EF9 292 aa4.23□□□□□ -1.73
LMBR1-216ENST00000477983 SLC47A1Q96FL8 570 aa4.23□□□□□ -1.73
LMBR1-216ENST00000477983 ZNF486Q96H40 463 aaPredicted RBP4.23□□□□□ -1.73
LMBR1-216ENST00000477983 PYURFQ96I23 114 aa4.23□□□□□ -1.73
LMBR1-216ENST00000477983 C3orf30Q96M34 536 aa4.23□□□□□ -1.73
LMBR1-216ENST00000477983 SERPINB11Q96P15 392 aa4.23□□□□□ -1.73
LMBR1-216ENST00000477983 UHRF2Q96PU4 802 aa4.23□□□□□ -1.73
LMBR1-216ENST00000477983 ZNF300Q96RE9 604 aaPredicted RBP4.23□□□□□ -1.73
LMBR1-216ENST00000477983 CSF3RQ99062 836 aa4.23□□□□□ -1.73
LMBR1-216ENST00000477983 RAD9AQ99638 391 aa4.23□□□□□ -1.73
LMBR1-216ENST00000477983 EPYCQ99645 322 aa4.23□□□□□ -1.73
LMBR1-216ENST00000477983 TMEM175Q9BSA9 504 aa4.23□□□□□ -1.73
LMBR1-216ENST00000477983 FICDQ9BVA6 458 aa4.23□□□□□ -1.73
LMBR1-216ENST00000477983 PHF7Q9BWX1 381 aaPredicted RBP4.23□□□□□ -1.73
LMBR1-216ENST00000477983 ITPAQ9BY32 194 aa4.23□□□□□ -1.73
LMBR1-216ENST00000477983 MMP28Q9H239 520 aa4.23□□□□□ -1.73
LMBR1-216ENST00000477983 TPK1Q9H3S4 243 aa4.23□□□□□ -1.73
LMBR1-216ENST00000477983 DSN1Q9H410 356 aa4.23□□□□□ -1.73
LMBR1-216ENST00000477983 SLA2Q9H6Q3 261 aa4.23□□□□□ -1.73
LMBR1-216ENST00000477983 ALG9Q9H6U8 611 aa4.23□□□□□ -1.73
LMBR1-216ENST00000477983 ATP13A3Q9H7F0 1226 aa4.23□□□□□ -1.73
LMBR1-216ENST00000477983 C3orf14Q9HBI5 128 aa4.23□□□□□ -1.73
LMBR1-216ENST00000477983 RBM22Q9NW64 420 aaKnown RBP eCLIP4.23□□□□□ -1.73
LMBR1-216ENST00000477983 MARCH5Q9NX47 278 aa4.23□□□□□ -1.73
LMBR1-216ENST00000477983 NUDT4Q9NZJ9 180 aa4.23□□□□□ -1.73
LMBR1-216ENST00000477983 CRNNQ9UBG3 495 aaPredicted RBP4.23□□□□□ -1.73
LMBR1-216ENST00000477983 SEC14L4Q9UDX3 406 aa4.23□□□□□ -1.73
LMBR1-216ENST00000477983 ZNF229Q9UJW7 825 aa4.23□□□□□ -1.73
LMBR1-216ENST00000477983 INTS6Q9UL03 887 aaKnown RBP4.23□□□□□ -1.73
LMBR1-216ENST00000477983 TBX21Q9UL17 535 aa4.23□□□□□ -1.73
LMBR1-216ENST00000477983 CFL2Q9Y281 166 aa4.23□□□□□ -1.73
LMBR1-216ENST00000477983 DGKBQ9Y6T7 804 aa4.23□□□□□ -1.73
LMBR1-216ENST00000477983 NUP205Q92621 2012 aa4.22□□□□□ -1.73
LMBR1-216ENST00000477983 C17orf113A0A1B0GUU1 675 aa4.22□□□□□ -1.73
LMBR1-216ENST00000477983 FAM149AA5PLN7 773 aa4.22□□□□□ -1.73
LMBR1-216ENST00000477983 PABPN1LA6NDY0 278 aaKnown RBP4.22□□□□□ -1.73
LMBR1-216ENST00000477983 KRTAP9-6A8MVA2 160 aa4.22□□□□□ -1.73
LMBR1-216ENST00000477983 HNRNPCL2B2RXH8 293 aa4.22□□□□□ -1.73
LMBR1-216ENST00000477983 FAM72CH0Y354 149 aa4.22□□□□□ -1.73
LMBR1-216ENST00000477983 H3BMM5 538 aa4.22□□□□□ -1.73
LMBR1-216ENST00000477983 H7C0S8 307 aa4.22□□□□□ -1.73
LMBR1-216ENST00000477983 J3QRK9 145 aa4.22□□□□□ -1.73
LMBR1-216ENST00000477983 DFFAO00273 331 aa4.22□□□□□ -1.73
LMBR1-216ENST00000477983 EIF3FO00303 357 aaPredicted RBP4.22□□□□□ -1.73
LMBR1-216ENST00000477983 PEX12O00623 359 aa4.22□□□□□ -1.73
LMBR1-216ENST00000477983 BCKDKO14874 412 aa4.22□□□□□ -1.73
LMBR1-216ENST00000477983 HAT1O14929 419 aa4.22□□□□□ -1.73
LMBR1-216ENST00000477983 RAD51BO15315 384 aa4.22□□□□□ -1.73
LMBR1-216ENST00000477983 SCO2O43819 266 aa4.22□□□□□ -1.73
LMBR1-216ENST00000477983 KDM4BO94953 1096 aa4.22□□□□□ -1.73
LMBR1-216ENST00000477983 CLDN14O95500 239 aa4.22□□□□□ -1.73
LMBR1-216ENST00000477983 TIMP1P01033 207 aa4.22□□□□□ -1.73
LMBR1-216ENST00000477983 RPLP0P05388 317 aaKnown RBP4.22□□□□□ -1.73
LMBR1-216ENST00000477983 TFPTP0C1Z6 253 aa4.22□□□□□ -1.73
LMBR1-216ENST00000477983 PRPS2P11908 318 aa4.22□□□□□ -1.73
LMBR1-216ENST00000477983 ZNF8P17098 575 aaPredicted RBP4.22□□□□□ -1.73
LMBR1-216ENST00000477983 PPIBP23284 216 aaKnown RBP4.22□□□□□ -1.73
LMBR1-216ENST00000477983 HRH2P25021 359 aa4.22□□□□□ -1.73
LMBR1-216ENST00000477983 PTBP1P26599 531 aaKnown RBP eCLIP4.22□□□□□ -1.731e-9■■■■■ 41.2
LMBR1-216ENST00000477983 ELK4P28324 431 aa4.22□□□□□ -1.73
LMBR1-216ENST00000477983 KRT20P35900 424 aa4.22□□□□□ -1.73
LMBR1-216ENST00000477983 NUDT1P36639 197 aa4.22□□□□□ -1.73
LMBR1-216ENST00000477983 POLR2IP36954 125 aaKnown RBP4.22□□□□□ -1.73
LMBR1-216ENST00000477983 CCR10P46092 362 aa4.22□□□□□ -1.73
LMBR1-216ENST00000477983 ZFP36L2P47974 494 aaKnown RBP4.22□□□□□ -1.73
LMBR1-216ENST00000477983 TRPC1P48995 793 aa4.22□□□□□ -1.73
LMBR1-216ENST00000477983 CLK1P49759 484 aaKnown RBP4.22□□□□□ -1.73
LMBR1-216ENST00000477983 BLKP51451 505 aa4.22□□□□□ -1.73
LMBR1-216ENST00000477983 CRIP2P52943 208 aaPredicted RBP4.22□□□□□ -1.73
LMBR1-216ENST00000477983 ATXN3P54252 364 aaPredicted RBP4.22□□□□□ -1.73
LMBR1-216ENST00000477983 RAB25P57735 213 aa4.22□□□□□ -1.73
LMBR1-216ENST00000477983 IL10RBQ08334 325 aa4.22□□□□□ -1.73
LMBR1-216ENST00000477983 CD47Q08722 323 aa4.22□□□□□ -1.73
LMBR1-216ENST00000477983 ELAVL2Q12926 359 aaKnown RBP4.22□□□□□ -1.73
LMBR1-216ENST00000477983 CSTF3Q12996 717 aaKnown RBP4.22□□□□□ -1.73
LMBR1-216ENST00000477983 SELENBP1Q13228 472 aa4.22□□□□□ -1.73
LMBR1-216ENST00000477983 VEZF1Q14119 521 aa4.22□□□□□ -1.73
LMBR1-216ENST00000477983 TBCEQ15813 527 aaPredicted RBP4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms