RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 CORO7P57737 925 aa6.43□□□□□ -1.38
SPTLC1-205ENST00000477888 CARTPTQ16568 116 aa6.43□□□□□ -1.38
SPTLC1-205ENST00000477888 TMEM201Q5SNT2 666 aa6.43□□□□□ -1.38
SPTLC1-205ENST00000477888 ADAMTSL2Q86TH1 951 aa6.43□□□□□ -1.38
SPTLC1-205ENST00000477888 CNGA4Q8IV77 575 aa6.43□□□□□ -1.38
SPTLC1-205ENST00000477888 WDR75Q8IWA0 830 aaKnown RBP6.43□□□□□ -1.38
SPTLC1-205ENST00000477888 CCDC170Q8IYT3 715 aa6.43□□□□□ -1.38
SPTLC1-205ENST00000477888 TCAIMQ8N3R3 496 aa6.43□□□□□ -1.38
SPTLC1-205ENST00000477888 HUS1BQ8NHY5 278 aa6.43□□□□□ -1.38
SPTLC1-205ENST00000477888 UHMK1Q8TAS1 419 aaKnown RBP6.43□□□□□ -1.38
SPTLC1-205ENST00000477888 RNF128Q8TEB7 428 aa6.43□□□□□ -1.38
SPTLC1-205ENST00000477888 DUSP19Q8WTR2 217 aa6.43□□□□□ -1.38
SPTLC1-205ENST00000477888 ABHD3Q8WU67 409 aa6.43□□□□□ -1.38
SPTLC1-205ENST00000477888 ANKRD49Q8WVL7 239 aa6.43□□□□□ -1.38
SPTLC1-205ENST00000477888 OSTF1Q92882 214 aa6.43□□□□□ -1.38
SPTLC1-205ENST00000477888 PKP2Q99959 881 aa6.43□□□□□ -1.38
SPTLC1-205ENST00000477888 BRINP2Q9C0B6 783 aa6.43□□□□□ -1.38
SPTLC1-205ENST00000477888 CNOT10Q9H9A5 744 aaKnown RBP6.43□□□□□ -1.38
SPTLC1-205ENST00000477888 ESM1Q9NQ30 184 aa6.43□□□□□ -1.38
SPTLC1-205ENST00000477888 KLHL13Q9P2N7 655 aa6.43□□□□□ -1.38
SPTLC1-205ENST00000477888 SLC17A6Q9P2U8 582 aa6.43□□□□□ -1.38
SPTLC1-205ENST00000477888 STOML1Q9UBI4 398 aa6.43□□□□□ -1.38
SPTLC1-205ENST00000477888 PRODH2Q9UF12 536 aa6.43□□□□□ -1.38
SPTLC1-205ENST00000477888 CES1P1Q9UKY3 287 aa6.43□□□□□ -1.38
SPTLC1-205ENST00000477888 REXO2Q9Y3B8 237 aaKnown RBP6.43□□□□□ -1.38
SPTLC1-205ENST00000477888 PLCE1Q9P212 2302 aa6.42□□□□□ -1.38
SPTLC1-205ENST00000477888 A0A0J9YW62 118 aa6.42□□□□□ -1.38
SPTLC1-205ENST00000477888 OR5H1A6NKK0 313 aa6.42□□□□□ -1.38
SPTLC1-205ENST00000477888 B4DSR2 109 aa6.42□□□□□ -1.38
SPTLC1-205ENST00000477888 TNFSF11O14788 317 aa6.42□□□□□ -1.38
SPTLC1-205ENST00000477888 SCO2O43819 266 aa6.42□□□□□ -1.38
SPTLC1-205ENST00000477888 NME6O75414 186 aaPredicted RBP6.42□□□□□ -1.38
SPTLC1-205ENST00000477888 GBAP04062 536 aa6.42□□□□□ -1.38
SPTLC1-205ENST00000477888 YES1P07947 543 aa6.42□□□□□ -1.38
SPTLC1-205ENST00000477888 PABPC4LP0CB38 370 aaKnown RBP6.42□□□□□ -1.38
SPTLC1-205ENST00000477888 GGT1P19440 569 aa6.42□□□□□ -1.38
SPTLC1-205ENST00000477888 EPHA1P21709 976 aa6.42□□□□□ -1.38
SPTLC1-205ENST00000477888 IGHV1-2P23083 117 aa6.42□□□□□ -1.38
SPTLC1-205ENST00000477888 EDNRAP25101 427 aa6.42□□□□□ -1.38
SPTLC1-205ENST00000477888 PSMA4P25789 261 aaKnown RBP6.42□□□□□ -1.38
SPTLC1-205ENST00000477888 PTX3P26022 381 aaPredicted RBP6.42□□□□□ -1.38
SPTLC1-205ENST00000477888 EVI2BP34910 448 aa6.42□□□□□ -1.38
SPTLC1-205ENST00000477888 KCNJ1P48048 391 aa6.42□□□□□ -1.38
SPTLC1-205ENST00000477888 RAC1P63000 192 aa6.42□□□□□ -1.38
SPTLC1-205ENST00000477888 TBX2Q13207 712 aaPredicted RBP6.42□□□□□ -1.38
SPTLC1-205ENST00000477888 RNPS1Q15287 305 aaKnown RBP6.42□□□□□ -1.38
SPTLC1-205ENST00000477888 TRIP13Q15645 432 aaPredicted RBP6.42□□□□□ -1.38
SPTLC1-205ENST00000477888 CDKL4Q5MAI5 379 aa6.42□□□□□ -1.38
SPTLC1-205ENST00000477888 TEDDM1Q5T9Z0 273 aa6.42□□□□□ -1.38
SPTLC1-205ENST00000477888 LGSNQ5TDP6 509 aa6.42□□□□□ -1.38
SPTLC1-205ENST00000477888 C6orf163Q5TEZ5 329 aa6.42□□□□□ -1.38
SPTLC1-205ENST00000477888 FAM45BPQ6NSW5 357 aa6.42□□□□□ -1.38
SPTLC1-205ENST00000477888 CYP20A1Q6UW02 462 aa6.42□□□□□ -1.38
SPTLC1-205ENST00000477888 UGT2A3Q6UWM9 527 aa6.42□□□□□ -1.38
SPTLC1-205ENST00000477888 NPSR1Q6W5P4 371 aa6.42□□□□□ -1.38
SPTLC1-205ENST00000477888 C1orf229Q6ZS94 237 aaPredicted RBP6.42□□□□□ -1.38
SPTLC1-205ENST00000477888 ESPNLQ6ZVH7 1005 aa6.42□□□□□ -1.38
SPTLC1-205ENST00000477888 FRA10AC1Q70Z53 315 aa6.42□□□□□ -1.38
SPTLC1-205ENST00000477888 GSTA5Q7RTV2 222 aa6.42□□□□□ -1.38
SPTLC1-205ENST00000477888 JAZF1Q86VZ6 243 aa6.42□□□□□ -1.38
SPTLC1-205ENST00000477888 TREML1Q86YW5 311 aa6.42□□□□□ -1.38
SPTLC1-205ENST00000477888 SYCE1Q8N0S2 351 aa6.42□□□□□ -1.38
SPTLC1-205ENST00000477888 NKAPQ8N5F7 415 aaKnown RBP6.42□□□□□ -1.38
SPTLC1-205ENST00000477888 ANKS4BQ8N8V4 417 aa6.42□□□□□ -1.38
SPTLC1-205ENST00000477888 OR4N2Q8NGD1 307 aa6.42□□□□□ -1.38
SPTLC1-205ENST00000477888 OR2W6PQ8NHA6 318 aa6.42□□□□□ -1.38
SPTLC1-205ENST00000477888 OR2V1Q8NHB1 315 aa6.42□□□□□ -1.38
SPTLC1-205ENST00000477888 FAM110BQ8TC76 370 aa6.42□□□□□ -1.38
SPTLC1-205ENST00000477888 FAM45AQ8TCE6 357 aa6.42□□□□□ -1.38
SPTLC1-205ENST00000477888 EFHD2Q96C19 240 aaPredicted RBP6.42□□□□□ -1.38
SPTLC1-205ENST00000477888 SNX18Q96RF0 628 aa6.42□□□□□ -1.38
SPTLC1-205ENST00000477888 NAP1L3Q99457 506 aaPredicted RBP6.42□□□□□ -1.38
SPTLC1-205ENST00000477888 MTERF1Q99551 399 aaKnown RBP6.42□□□□□ -1.38
SPTLC1-205ENST00000477888 NPAS1Q99742 590 aa6.42□□□□□ -1.38
SPTLC1-205ENST00000477888 CENPKQ9BS16 269 aa6.42□□□□□ -1.38
SPTLC1-205ENST00000477888 TRMOQ9BU70 441 aa6.42□□□□□ -1.38
SPTLC1-205ENST00000477888 CDC42EP4Q9H3Q1 356 aaKnown RBP6.42□□□□□ -1.38
SPTLC1-205ENST00000477888 GP6Q9HCN6 339 aa6.42□□□□□ -1.38
SPTLC1-205ENST00000477888 XAB2Q9HCS7 855 aaKnown RBP6.42□□□□□ -1.38
SPTLC1-205ENST00000477888 SDHAF3Q9NRP4 125 aa6.42□□□□□ -1.38
SPTLC1-205ENST00000477888 HIF1ANQ9NWT6 349 aa6.42□□□□□ -1.38
SPTLC1-205ENST00000477888 CTNNAL1Q9UBT7 734 aa6.42□□□□□ -1.38
SPTLC1-205ENST00000477888 DMGDHQ9UI17 866 aaKnown RBP6.42□□□□□ -1.38
SPTLC1-205ENST00000477888 CORO1CQ9ULV4 474 aaPredicted RBP6.42□□□□□ -1.38
SPTLC1-205ENST00000477888 USP22Q9UPT9 525 aa6.42□□□□□ -1.38
SPTLC1-205ENST00000477888 TSC22D4Q9Y3Q8 395 aa6.42□□□□□ -1.38
SPTLC1-205ENST00000477888 PTGDR2Q9Y5Y4 395 aa6.42□□□□□ -1.38
SPTLC1-205ENST00000477888 SLC25A15Q9Y619 301 aa6.42□□□□□ -1.38
SPTLC1-205ENST00000477888 CMYA5Q8N3K9 4069 aa6.41□□□□□ -1.38
SPTLC1-205ENST00000477888 IGLV3-32A0A0A0MS00 114 aa6.41□□□□□ -1.38
SPTLC1-205ENST00000477888 GOLGA6L19H0YKK7 550 aa6.41□□□□□ -1.38
SPTLC1-205ENST00000477888 CTAGE8P0CG41 777 aa6.41□□□□□ -1.38
SPTLC1-205ENST00000477888 ZNF17P17021 662 aa6.41□□□□□ -1.38
SPTLC1-205ENST00000477888 COX5AP20674 150 aa6.41□□□□□ -1.38
SPTLC1-205ENST00000477888 IL12BP29460 328 aa6.41□□□□□ -1.38
SPTLC1-205ENST00000477888 FEN1P39748 380 aaKnown RBP6.41□□□□□ -1.38
SPTLC1-205ENST00000477888 OR3A2P47893 321 aa6.41□□□□□ -1.38
SPTLC1-205ENST00000477888 ZNF83P51522 516 aa6.41□□□□□ -1.38
SPTLC1-205ENST00000477888 CARD18P57730 90 aa6.41□□□□□ -1.38
SPTLC1-205ENST00000477888 UBA52P62987 128 aaKnown RBP6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms