RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 MFRPQ9BY79 579 aa14.06□□□□□ -0.16
SEC13-215ENST00000477547 PIF1Q9H611 641 aa14.06□□□□□ -0.16
SEC13-215ENST00000477547 TMEM38AQ9H6F2 299 aa14.06□□□□□ -0.16
SEC13-215ENST00000477547 RUBCNLQ9H714 662 aa14.06□□□□□ -0.16
SEC13-215ENST00000477547 SH2D2AQ9NP31 389 aa14.06□□□□□ -0.16
SEC13-215ENST00000477547 POLE3Q9NRF9 147 aa14.06□□□□□ -0.16
SEC13-215ENST00000477547 SACM1LQ9NTJ5 587 aa14.06□□□□□ -0.16
SEC13-215ENST00000477547 KLRF1Q9NZS2 232 aa14.06□□□□□ -0.16
SEC13-215ENST00000477547 CALML5Q9NZT1 146 aa14.06□□□□□ -0.16
SEC13-215ENST00000477547 ABCD2Q9UBJ2 740 aa14.06□□□□□ -0.16
SEC13-215ENST00000477547 CNOT11Q9UKZ1 510 aaKnown RBP14.06□□□□□ -0.16
SEC13-215ENST00000477547 ABCG2Q9UNQ0 655 aa14.06□□□□□ -0.16
SEC13-215ENST00000477547 ANGPT4Q9Y264 503 aa14.06□□□□□ -0.16
SEC13-215ENST00000477547 AP3M1Q9Y2T2 418 aa14.06□□□□□ -0.16
SEC13-215ENST00000477547 PCDHGA10Q9Y5H3 936 aa14.06□□□□□ -0.16
SEC13-215ENST00000477547 TLN1Q9Y490 2541 aaKnown RBP14.05□□□□□ -0.16
SEC13-215ENST00000477547 G3V3Y1 287 aa14.05□□□□□ -0.16
SEC13-215ENST00000477547 SCO2O43819 266 aa14.05□□□□□ -0.16
SEC13-215ENST00000477547 NME2P1O60361 137 aa14.05□□□□□ -0.16
SEC13-215ENST00000477547 P04436 131 aa14.05□□□□□ -0.16
SEC13-215ENST00000477547 TFPTP0C1Z6 253 aa14.05□□□□□ -0.16
SEC13-215ENST00000477547 GP1BBP13224 206 aa14.05□□□□□ -0.16
SEC13-215ENST00000477547 NME2P22392 152 aa14.05□□□□□ -0.16
SEC13-215ENST00000477547 LCN1P31025 176 aa14.05□□□□□ -0.16
SEC13-215ENST00000477547 EVI2BP34910 448 aa14.05□□□□□ -0.16
SEC13-215ENST00000477547 CDK6Q00534 326 aa14.05□□□□□ -0.16
SEC13-215ENST00000477547 GABPB1Q06547 395 aaPredicted RBP14.05□□□□□ -0.16
SEC13-215ENST00000477547 SCARB2Q14108 478 aa14.05□□□□□ -0.16
SEC13-215ENST00000477547 ZNF169Q14929 603 aaPredicted RBP14.05□□□□□ -0.16
SEC13-215ENST00000477547 GPR68Q15743 365 aa14.05□□□□□ -0.16
SEC13-215ENST00000477547 ZNF630Q2M218 657 aaPredicted RBP14.05□□□□□ -0.16
SEC13-215ENST00000477547 SLC22A10Q63ZE4 541 aa14.05□□□□□ -0.16
SEC13-215ENST00000477547 SLC6A19Q695T7 634 aa14.05□□□□□ -0.16
SEC13-215ENST00000477547 BICRALQ6AI39 1079 aa14.05□□□□□ -0.16
SEC13-215ENST00000477547 TYW3Q6IPR3 259 aaKnown RBP14.05□□□□□ -0.16
SEC13-215ENST00000477547 BNC2Q6ZN30 1099 aaPredicted RBP14.05□□□□□ -0.16
SEC13-215ENST00000477547 RINLQ6ZS11 566 aa14.05□□□□□ -0.16
SEC13-215ENST00000477547 Q6ZS92 163 aa14.05□□□□□ -0.16
SEC13-215ENST00000477547 IFNEQ86WN2 208 aa14.05□□□□□ -0.16
SEC13-215ENST00000477547 CALHM3Q86XJ0 350 aa14.05□□□□□ -0.16
SEC13-215ENST00000477547 PTOV1Q86YD1 416 aa14.05□□□□□ -0.16
SEC13-215ENST00000477547 DEFB107AQ8IZN7 70 aa14.05□□□□□ -0.16
SEC13-215ENST00000477547 ZNF619Q8N2I2 560 aa14.05□□□□□ -0.16
SEC13-215ENST00000477547 ZNF614Q8N883 585 aa14.05□□□□□ -0.16
SEC13-215ENST00000477547 TMEM178AQ8NBL3 297 aa14.05□□□□□ -0.16
SEC13-215ENST00000477547 SCMH1Q96GD3 660 aa14.05□□□□□ -0.16
SEC13-215ENST00000477547 REXO5Q96IC2 774 aaKnown RBP14.05□□□□□ -0.16
SEC13-215ENST00000477547 OSBPL11Q9BXB4 747 aa14.05□□□□□ -0.16
SEC13-215ENST00000477547 SLC25A18Q9H1K4 315 aa14.05□□□□□ -0.16
SEC13-215ENST00000477547 SLC38A1Q9H2H9 487 aa14.05□□□□□ -0.16
SEC13-215ENST00000477547 ADA2Q9NZK5 511 aa14.05□□□□□ -0.16
SEC13-215ENST00000477547 CNIH4Q9P003 139 aa14.05□□□□□ -0.16
SEC13-215ENST00000477547 MKLN1Q9UL63 735 aa14.05□□□□□ -0.16
SEC13-215ENST00000477547 B3GNT3Q9Y2A9 372 aa14.05□□□□□ -0.16
SEC13-215ENST00000477547 KLF13Q9Y2Y9 288 aaPredicted RBP14.05□□□□□ -0.16
SEC13-215ENST00000477547 USP9XQ93008 2570 aaPredicted RBP14.05□□□□□ -0.16
SEC13-215ENST00000477547 RELNP78509 3460 aa14.04□□□□□ -0.16
SEC13-215ENST00000477547 NBPF19A0A087WUL8 3843 aa14.04□□□□□ -0.16
SEC13-215ENST00000477547 A0A0G2JMM0 328 aa14.04□□□□□ -0.16
SEC13-215ENST00000477547 A0A1W2PPB8 328 aa14.04□□□□□ -0.16
SEC13-215ENST00000477547 A0A1W2PRS3 328 aa14.04□□□□□ -0.16
SEC13-215ENST00000477547 KIR3DP1A8MWS1 328 aa14.04□□□□□ -0.16
SEC13-215ENST00000477547 EBAG9O00559 213 aa14.04□□□□□ -0.16
SEC13-215ENST00000477547 SCDO00767 359 aa14.04□□□□□ -0.16
SEC13-215ENST00000477547 FCMRO60667 390 aa14.04□□□□□ -0.16
SEC13-215ENST00000477547 OXSR1O95747 527 aaPredicted RBP14.04□□□□□ -0.16
SEC13-215ENST00000477547 SP1P08047 785 aa14.04□□□□□ -0.16
SEC13-215ENST00000477547 HPGDP15428 266 aa14.04□□□□□ -0.16
SEC13-215ENST00000477547 PCGF2P35227 344 aa14.04□□□□□ -0.16
SEC13-215ENST00000477547 CPOXP36551 454 aa14.04□□□□□ -0.16
SEC13-215ENST00000477547 EEFSECP57772 596 aaKnown RBP14.04□□□□□ -0.16
SEC13-215ENST00000477547 GPR85P60893 370 aa14.04□□□□□ -0.16
SEC13-215ENST00000477547 KCNJ2P63252 427 aa14.04□□□□□ -0.16
SEC13-215ENST00000477547 TLE1Q04724 770 aa14.04□□□□□ -0.16
SEC13-215ENST00000477547 CHRNEQ04844 493 aa14.04□□□□□ -0.16
SEC13-215ENST00000477547 LIPEQ05469 1076 aa14.04□□□□□ -0.16
SEC13-215ENST00000477547 RBBP4Q09028 425 aa14.04□□□□□ -0.16
SEC13-215ENST00000477547 BNIP1Q12981 228 aa14.04□□□□□ -0.16
SEC13-215ENST00000477547 MAPK11Q15759 364 aa14.04□□□□□ -0.16
SEC13-215ENST00000477547 ADRM1Q16186 407 aa14.04□□□□□ -0.16
SEC13-215ENST00000477547 TBCELQ5QJ74 424 aa14.04□□□□□ -0.16
SEC13-215ENST00000477547 SLC25A25Q6KCM7 469 aa14.04□□□□□ -0.16
SEC13-215ENST00000477547 ERICH5Q6P6B1 374 aa14.04□□□□□ -0.16
SEC13-215ENST00000477547 LRRC74BQ6ZQY2 392 aa14.04□□□□□ -0.16
SEC13-215ENST00000477547 GALNTL5Q7Z4T8 443 aa14.04□□□□□ -0.16
SEC13-215ENST00000477547 ZNF527Q8NB42 609 aa14.04□□□□□ -0.16
SEC13-215ENST00000477547 OR2T12Q8NG77 320 aa14.04□□□□□ -0.16
SEC13-215ENST00000477547 BBS10Q8TAM1 723 aa14.04□□□□□ -0.16
SEC13-215ENST00000477547 GRHL3Q8TE85 626 aa14.04□□□□□ -0.16
SEC13-215ENST00000477547 TREX2Q9BQ50 279 aaPredicted RBP14.04□□□□□ -0.16
SEC13-215ENST00000477547 TBL1XR1Q9BZK7 514 aa14.04□□□□□ -0.16
SEC13-215ENST00000477547 ALG2Q9H553 416 aa14.04□□□□□ -0.16
SEC13-215ENST00000477547 LUZP4Q9P127 313 aa14.04□□□□□ -0.16
SEC13-215ENST00000477547 USP22Q9UPT9 525 aa14.04□□□□□ -0.16
SEC13-215ENST00000477547 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.04□□□□□ -0.16
SEC13-215ENST00000477547 DSPPQ9NZW4 1301 aa14.04□□□□□ -0.16
SEC13-215ENST00000477547 FREM3P0C091 2139 aa14.04□□□□□ -0.16
SEC13-215ENST00000477547 HEATR5AQ86XA9 2040 aa14.03□□□□□ -0.16
SEC13-215ENST00000477547 CENPVL1A0A0U1RR11 272 aa14.03□□□□□ -0.16
SEC13-215ENST00000477547 HNRNPCL1O60812 293 aaKnown RBP14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms