RNA–Protein interactions for RNA: ENST00000476954.1

SMG5-204, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG5, Length 1,161 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-204ENST00000476954 HBMQ6B0K9 141 aa13.5□□□□□ -0.25
SMG5-204ENST00000476954 WDR75Q8IWA0 830 aaKnown RBP13.5□□□□□ -0.25
SMG5-204ENST00000476954 SLC44A2Q8IWA5 706 aaPredicted RBP13.5□□□□□ -0.25
SMG5-204ENST00000476954 RNF128Q8TEB7 428 aa13.5□□□□□ -0.25
SMG5-204ENST00000476954 OSTF1Q92882 214 aa13.5□□□□□ -0.25
SMG5-204ENST00000476954 MUCL1Q96DR8 90 aa13.5□□□□□ -0.25
SMG5-204ENST00000476954 RADILQ96JH8 1075 aa13.5□□□□□ -0.25
SMG5-204ENST00000476954 KLHL13Q9P2N7 655 aa13.5□□□□□ -0.25
SMG5-204ENST00000476954 PCDHA9Q9Y5H5 950 aa13.5□□□□□ -0.25
SMG5-204ENST00000476954 RYR3Q15413 4870 aa13.49□□□□□ -0.25
SMG5-204ENST00000476954 LOC390937A0A1W2PQ73 354 aa13.49□□□□□ -0.25
SMG5-204ENST00000476954 A0A1W2PR80 420 aa13.49□□□□□ -0.25
SMG5-204ENST00000476954 GOLGA6L10A6NI86 522 aa13.49□□□□□ -0.25
SMG5-204ENST00000476954 TRIM77I1YAP6 450 aa13.49□□□□□ -0.25
SMG5-204ENST00000476954 DHRS4L1P0CG22 281 aa13.49□□□□□ -0.25
SMG5-204ENST00000476954 CD40P25942 277 aa13.49□□□□□ -0.25
SMG5-204ENST00000476954 SHC1P29353 583 aa13.49□□□□□ -0.25
SMG5-204ENST00000476954 ACAP2Q15057 778 aa13.49□□□□□ -0.25
SMG5-204ENST00000476954 ZSWIM7Q19AV6 140 aa13.49□□□□□ -0.25
SMG5-204ENST00000476954 MST1LQ2TV78 715 aa13.49□□□□□ -0.25
SMG5-204ENST00000476954 ZNF544Q6NX49 715 aa13.49□□□□□ -0.25
SMG5-204ENST00000476954 THSD4Q6ZMP0 1018 aa13.49□□□□□ -0.25
SMG5-204ENST00000476954 LRRC17Q8N6Y2 441 aa13.49□□□□□ -0.25
SMG5-204ENST00000476954 LINC01356Q8N9X3 169 aa13.49□□□□□ -0.25
SMG5-204ENST00000476954 RNF214Q8ND24 703 aa13.49□□□□□ -0.25
SMG5-204ENST00000476954 SLC9A6Q92581 669 aa13.49□□□□□ -0.25
SMG5-204ENST00000476954 KLHL29Q96CT2 875 aa13.49□□□□□ -0.25
SMG5-204ENST00000476954 CNRIP1Q96F85 164 aaPredicted RBP13.49□□□□□ -0.25
SMG5-204ENST00000476954 USB1Q9BQ65 265 aaKnown RBP13.49□□□□□ -0.25
SMG5-204ENST00000476954 KLHDC3Q9BQ90 382 aa13.49□□□□□ -0.25
SMG5-204ENST00000476954 SRXN1Q9BYN0 137 aa13.49□□□□□ -0.25
SMG5-204ENST00000476954 SDHAF3Q9NRP4 125 aa13.49□□□□□ -0.25
SMG5-204ENST00000476954 PAQR5Q9NXK6 330 aaPredicted RBP13.49□□□□□ -0.25
SMG5-204ENST00000476954 OPTCQ9UBM4 332 aa13.49□□□□□ -0.25
SMG5-204ENST00000476954 TSC22D4Q9Y3Q8 395 aa13.49□□□□□ -0.25
SMG5-204ENST00000476954 ATP23Q9Y6H3 246 aa13.49□□□□□ -0.25
SMG5-204ENST00000476954 PMF1-BGLAPU3KQ54 211 aa13.49□□□□□ -0.25
SMG5-204ENST00000476954 NPIPA5A0A0B4J1W7 369 aa13.48□□□□□ -0.25
SMG5-204ENST00000476954 NPIPA7E9PJI5 369 aa13.48□□□□□ -0.25
SMG5-204ENST00000476954 K7EPI3 171 aa13.48□□□□□ -0.25
SMG5-204ENST00000476954 NDUFB5O43674 189 aa13.48□□□□□ -0.25
SMG5-204ENST00000476954 PIAS1O75925 651 aa13.48□□□□□ -0.25
SMG5-204ENST00000476954 S100BP04271 92 aaPredicted RBP13.48□□□□□ -0.25
SMG5-204ENST00000476954 NPIPA8P0DM63 369 aa13.48□□□□□ -0.25
SMG5-204ENST00000476954 IGHV1-2P23083 117 aa13.48□□□□□ -0.25
SMG5-204ENST00000476954 PSMA4P25789 261 aaKnown RBP13.48□□□□□ -0.25
SMG5-204ENST00000476954 APEX1P27695 318 aaKnown RBP13.48□□□□□ -0.25
SMG5-204ENST00000476954 HILS1P60008 231 aa13.48□□□□□ -0.25
SMG5-204ENST00000476954 CHRNB3Q05901 458 aa13.48□□□□□ -0.25
SMG5-204ENST00000476954 ZNF239Q16600 458 aaKnown RBP13.48□□□□□ -0.25
SMG5-204ENST00000476954 CPSF6Q16630 551 aaKnown RBP eCLIP13.48□□□□□ -0.25
SMG5-204ENST00000476954 ZNF628Q5EBL2 1059 aa13.48□□□□□ -0.25
SMG5-204ENST00000476954 SH2D4BQ5SQS7 431 aa13.48□□□□□ -0.25
SMG5-204ENST00000476954 RNASEH2BQ5TBB1 312 aaKnown RBP13.48□□□□□ -0.25
SMG5-204ENST00000476954 SHISA2Q6UWI4 295 aa13.48□□□□□ -0.25
SMG5-204ENST00000476954 TMEM108Q6UXF1 575 aa13.48□□□□□ -0.25
SMG5-204ENST00000476954 DEF8Q6ZN54 512 aa13.48□□□□□ -0.25
SMG5-204ENST00000476954 Q6ZT83 130 aa13.48□□□□□ -0.25
SMG5-204ENST00000476954 TDRPQ86YL5 185 aa13.48□□□□□ -0.25
SMG5-204ENST00000476954 PPIL6Q8IXY8 311 aa13.48□□□□□ -0.25
SMG5-204ENST00000476954 TEX9Q8N6V9 391 aa13.48□□□□□ -0.25
SMG5-204ENST00000476954 OR52N5Q8NH56 324 aa13.48□□□□□ -0.25
SMG5-204ENST00000476954 ZNF418Q8TF45 676 aaPredicted RBP13.48□□□□□ -0.25
SMG5-204ENST00000476954 MAIP1Q8WWC4 291 aa13.48□□□□□ -0.25
SMG5-204ENST00000476954 FBXO17Q96EF6 278 aa13.48□□□□□ -0.25
SMG5-204ENST00000476954 ZNF681Q96N22 645 aa13.48□□□□□ -0.25
SMG5-204ENST00000476954 INPP5KQ9BT40 448 aa13.48□□□□□ -0.25
SMG5-204ENST00000476954 TRMOQ9BU70 441 aa13.48□□□□□ -0.25
SMG5-204ENST00000476954 RBM4Q9BWF3 364 aaKnown RBP13.48□□□□□ -0.25
SMG5-204ENST00000476954 C1QTNF6Q9BXI9 259 aa13.48□□□□□ -0.25
SMG5-204ENST00000476954 MRPL1Q9BYD6 325 aaKnown RBP13.48□□□□□ -0.25
SMG5-204ENST00000476954 CHMP2BQ9UQN3 213 aa13.48□□□□□ -0.25
SMG5-204ENST00000476954 OR10H1Q9Y4A9 318 aa13.48□□□□□ -0.25
SMG5-204ENST00000476954 PCDHGA11Q9Y5H2 935 aa13.48□□□□□ -0.25
SMG5-204ENST00000476954 FKBP7Q9Y680 259 aa13.48□□□□□ -0.25
SMG5-204ENST00000476954 OR5H1A6NKK0 313 aa13.47□□□□□ -0.25
SMG5-204ENST00000476954 C9JVG2 144 aa13.47□□□□□ -0.25
SMG5-204ENST00000476954 LILRA1O75019 489 aa13.47□□□□□ -0.25
SMG5-204ENST00000476954 CXCR5P32302 372 aa13.47□□□□□ -0.25
SMG5-204ENST00000476954 ELK3P41970 407 aa13.47□□□□□ -0.25
SMG5-204ENST00000476954 CDH15P55291 814 aa13.47□□□□□ -0.25
SMG5-204ENST00000476954 CHRNEQ04844 493 aa13.47□□□□□ -0.25
SMG5-204ENST00000476954 TIMM23BQ5SRD1 257 aa13.47□□□□□ -0.25
SMG5-204ENST00000476954 CCNYL2Q5T2Q4 361 aa13.47□□□□□ -0.25
SMG5-204ENST00000476954 GTF2IRD2BQ6EKJ0 949 aa13.47□□□□□ -0.25
SMG5-204ENST00000476954 APOOLQ6UXV4 268 aa13.47□□□□□ -0.25
SMG5-204ENST00000476954 ESPNLQ6ZVH7 1005 aa13.47□□□□□ -0.25
SMG5-204ENST00000476954 GTF2IRD2Q86UP8 949 aa13.47□□□□□ -0.25
SMG5-204ENST00000476954 RNF10Q8N5U6 811 aaKnown RBP13.47□□□□□ -0.25
SMG5-204ENST00000476954 WDR20Q8TBZ3 569 aa13.47□□□□□ -0.25
SMG5-204ENST00000476954 ZNF775Q96BV0 537 aaPredicted RBP13.47□□□□□ -0.25
SMG5-204ENST00000476954 MTBPQ96DY7 904 aa13.47□□□□□ -0.25
SMG5-204ENST00000476954 RNF145Q96MT1 663 aa13.47□□□□□ -0.25
SMG5-204ENST00000476954 SNX18Q96RF0 628 aa13.47□□□□□ -0.25
SMG5-204ENST00000476954 PCDHB10Q9UN67 800 aa13.47□□□□□ -0.25
SMG5-204ENST00000476954 MGAT4BQ9UQ53 548 aa13.47□□□□□ -0.25
SMG5-204ENST00000476954 MTO1Q9Y2Z2 717 aaKnown RBP13.47□□□□□ -0.25
SMG5-204ENST00000476954 RNF11Q9Y3C5 154 aa13.47□□□□□ -0.25
SMG5-204ENST00000476954 C1orf226A1L170 272 aa13.46□□□□□ -0.25
SMG5-204ENST00000476954 H0YIV9 168 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms