RNA–Protein interactions for RNA: ENST00000474871.5

NPHP3-206, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 4,493 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-206ENST00000474871 DCSTAMPQ9H295 470 aa4.56□□□□□ -1.68
NPHP3-206ENST00000474871 NMRK2Q9NPI5 230 aa4.56□□□□□ -1.68
NPHP3-206ENST00000474871 PRPF19Q9UMS4 504 aaKnown RBP4.56□□□□□ -1.68
NPHP3-206ENST00000474871 HCFC2Q9Y5Z7 792 aa4.56□□□□□ -1.68
NPHP3-206ENST00000474871 FAM149AA5PLN7 773 aa4.56□□□□□ -1.68
NPHP3-206ENST00000474871 TUBAL3A6NHL2 446 aa4.56□□□□□ -1.68
NPHP3-206ENST00000474871 TRDCB7Z8K6 153 aa4.56□□□□□ -1.68
NPHP3-206ENST00000474871 H7C417 338 aa4.56□□□□□ -1.68
NPHP3-206ENST00000474871 B4GALT2O60909 372 aa4.56□□□□□ -1.68
NPHP3-206ENST00000474871 SAT1P21673 171 aa4.56□□□□□ -1.68
NPHP3-206ENST00000474871 ETV6P41212 452 aa4.56□□□□□ -1.68
NPHP3-206ENST00000474871 COMPP49747 757 aaPredicted RBP4.56□□□□□ -1.68
NPHP3-206ENST00000474871 TAF6P49848 677 aa4.56□□□□□ -1.68
NPHP3-206ENST00000474871 CRISP1P54107 249 aa4.56□□□□□ -1.68
NPHP3-206ENST00000474871 ERVK11-1P61568 191 aa4.56□□□□□ -1.68
NPHP3-206ENST00000474871 PKIAP61925 76 aa4.56□□□□□ -1.68
NPHP3-206ENST00000474871 PPIAP62937 165 aaKnown RBP4.56□□□□□ -1.68
NPHP3-206ENST00000474871 OVGP1Q12889 678 aa4.56□□□□□ -1.68
NPHP3-206ENST00000474871 ISXQ2M1V0 245 aa4.56□□□□□ -1.68
NPHP3-206ENST00000474871 ZNF630Q2M218 657 aaPredicted RBP4.56□□□□□ -1.68
NPHP3-206ENST00000474871 RABGAP1LQ5R372 815 aa4.56□□□□□ -1.68
NPHP3-206ENST00000474871 SERPINA13PQ6UXR4 307 aa4.56□□□□□ -1.68
NPHP3-206ENST00000474871 BAIAP2L2Q6UXY1 529 aa4.56□□□□□ -1.68
NPHP3-206ENST00000474871 CYFIP1Q7L576 1253 aa4.56□□□□□ -1.68
NPHP3-206ENST00000474871 DNERQ8NFT8 737 aa4.56□□□□□ -1.68
NPHP3-206ENST00000474871 CD200R1Q8TD46 325 aa4.56□□□□□ -1.68
NPHP3-206ENST00000474871 PHF10Q8WUB8 498 aaKnown RBP4.56□□□□□ -1.68
NPHP3-206ENST00000474871 KCNE4Q8WWG9 221 aa4.56□□□□□ -1.68
NPHP3-206ENST00000474871 CLEC4DQ8WXI8 215 aa4.56□□□□□ -1.68
NPHP3-206ENST00000474871 TMEM234Q8WY98 164 aa4.56□□□□□ -1.68
NPHP3-206ENST00000474871 PIGKQ92643 395 aa4.56□□□□□ -1.68
NPHP3-206ENST00000474871 SLC5A5Q92911 643 aa4.56□□□□□ -1.68
NPHP3-206ENST00000474871 DNAJC19Q96DA6 116 aa4.56□□□□□ -1.68
NPHP3-206ENST00000474871 PIMREGQ9BSJ6 248 aa4.56□□□□□ -1.68
NPHP3-206ENST00000474871 CHST5Q9GZS9 411 aa4.56□□□□□ -1.68
NPHP3-206ENST00000474871 SMURF2Q9HAU4 748 aa4.56□□□□□ -1.68
NPHP3-206ENST00000474871 FZD3Q9NPG1 666 aa4.56□□□□□ -1.68
NPHP3-206ENST00000474871 ISYNA1Q9NPH2 558 aa4.56□□□□□ -1.68
NPHP3-206ENST00000474871 TAS2R9Q9NYW1 312 aa4.56□□□□□ -1.68
NPHP3-206ENST00000474871 CA5BQ9Y2D0 317 aa4.56□□□□□ -1.68
NPHP3-206ENST00000474871 MRPS17Q9Y2R5 130 aaKnown RBP4.56□□□□□ -1.68
NPHP3-206ENST00000474871 ATG2AQ2TAZ0 1938 aa4.56□□□□□ -1.68
NPHP3-206ENST00000474871 COL11A1P12107 1806 aaPredicted RBP4.55□□□□□ -1.68
NPHP3-206ENST00000474871 FIGNL2A6NMB9 653 aa4.55□□□□□ -1.68
NPHP3-206ENST00000474871 C4orf47A7E2U8 309 aa4.55□□□□□ -1.68
NPHP3-206ENST00000474871 CLIC2O15247 247 aa4.55□□□□□ -1.68
NPHP3-206ENST00000474871 RAMP3O60896 148 aa4.55□□□□□ -1.68
NPHP3-206ENST00000474871 STX11O75558 287 aa4.55□□□□□ -1.68
NPHP3-206ENST00000474871 GPR75O95800 540 aa4.55□□□□□ -1.68
NPHP3-206ENST00000474871 ALDOAP04075 364 aaKnown RBP4.55□□□□□ -1.68
NPHP3-206ENST00000474871 CEACAM1P13688 526 aa4.55□□□□□ -1.68
NPHP3-206ENST00000474871 GLB1P16278 677 aa4.55□□□□□ -1.68
NPHP3-206ENST00000474871 PCMT1P22061 227 aa4.55□□□□□ -1.68
NPHP3-206ENST00000474871 CD96P40200 585 aa4.55□□□□□ -1.68
NPHP3-206ENST00000474871 CTSCP53634 463 aa4.55□□□□□ -1.68
NPHP3-206ENST00000474871 HGFACQ04756 655 aa4.55□□□□□ -1.68
NPHP3-206ENST00000474871 RBPJQ06330 500 aa4.55□□□□□ -1.68
NPHP3-206ENST00000474871 EXOSC2Q13868 293 aaKnown RBP4.55□□□□□ -1.68
NPHP3-206ENST00000474871 PTPRCAPQ14761 206 aa4.55□□□□□ -1.68
NPHP3-206ENST00000474871 COLEC12Q5KU26 742 aa4.55□□□□□ -1.68
NPHP3-206ENST00000474871 FAM83HQ6ZRV2 1179 aaPredicted RBP4.55□□□□□ -1.68
NPHP3-206ENST00000474871 FCRLAQ7L513 359 aa4.55□□□□□ -1.68
NPHP3-206ENST00000474871 PID1Q7Z2X4 250 aa4.55□□□□□ -1.68
NPHP3-206ENST00000474871 ATG4DQ86TL0 474 aaPredicted RBP4.55□□□□□ -1.68
NPHP3-206ENST00000474871 LDLRAD3Q86YD5 345 aa4.55□□□□□ -1.68
NPHP3-206ENST00000474871 GLB1L2Q8IW92 636 aa4.55□□□□□ -1.68
NPHP3-206ENST00000474871 NRMQ8IXM6 262 aa4.55□□□□□ -1.68
NPHP3-206ENST00000474871 RNASE11Q8TAA1 199 aaKnown RBP4.55□□□□□ -1.68
NPHP3-206ENST00000474871 BLOC1S5Q8TDH9 187 aa4.55□□□□□ -1.68
NPHP3-206ENST00000474871 GRHL3Q8TE85 626 aa4.55□□□□□ -1.68
NPHP3-206ENST00000474871 NEDD4LQ96PU5 975 aa4.55□□□□□ -1.68
NPHP3-206ENST00000474871 SEPT5Q99719 369 aaPredicted RBP4.55□□□□□ -1.68
NPHP3-206ENST00000474871 EBF4Q9BQW3 602 aa4.55□□□□□ -1.68
NPHP3-206ENST00000474871 C11orf70Q9BRQ4 267 aa4.55□□□□□ -1.68
NPHP3-206ENST00000474871 LACRTQ9GZZ8 138 aa4.55□□□□□ -1.68
NPHP3-206ENST00000474871 BARX1Q9HBU1 254 aaPredicted RBP4.55□□□□□ -1.68
NPHP3-206ENST00000474871 XPNPEP3Q9NQH7 507 aa4.55□□□□□ -1.68
NPHP3-206ENST00000474871 C14orf105Q9NVL8 296 aa4.55□□□□□ -1.68
NPHP3-206ENST00000474871 DNAJC17Q9NVM6 304 aaKnown RBP4.55□□□□□ -1.68
NPHP3-206ENST00000474871 PAK1IP1Q9NWT1 392 aaPredicted RBP4.55□□□□□ -1.68
NPHP3-206ENST00000474871 FZD1Q9UP38 647 aa4.55□□□□□ -1.68
NPHP3-206ENST00000474871 RNF115Q9Y4L5 304 aa4.55□□□□□ -1.68
NPHP3-206ENST00000474871 TRAV26-1A0A087WT03 109 aa4.55□□□□□ -1.68
NPHP3-206ENST00000474871 GRM6O15303 877 aa4.55□□□□□ -1.68
NPHP3-206ENST00000474871 B3GALT2O43825 422 aa4.55□□□□□ -1.68
NPHP3-206ENST00000474871 TNFRSF6BO95407 300 aa4.55□□□□□ -1.68
NPHP3-206ENST00000474871 CD5P06127 495 aa4.55□□□□□ -1.68
NPHP3-206ENST00000474871 JMJD7P0C870 316 aa4.55□□□□□ -1.68
NPHP3-206ENST00000474871 THRBP10828 461 aa4.55□□□□□ -1.68
NPHP3-206ENST00000474871 PTPRAP18433 802 aa4.55□□□□□ -1.68
NPHP3-206ENST00000474871 IL12BP29460 328 aa4.55□□□□□ -1.68
NPHP3-206ENST00000474871 RPL14P50914 215 aaKnown RBP4.55□□□□□ -1.68
NPHP3-206ENST00000474871 SUMO3P55854 103 aaPredicted RBP4.55□□□□□ -1.68
NPHP3-206ENST00000474871 SNRPD2P62316 118 aaKnown RBP4.55□□□□□ -1.68
NPHP3-206ENST00000474871 PLA2G7Q13093 441 aa4.55□□□□□ -1.68
NPHP3-206ENST00000474871 MAPK7Q13164 816 aa4.55□□□□□ -1.68
NPHP3-206ENST00000474871 CAMK1Q14012 370 aa4.55□□□□□ -1.68
NPHP3-206ENST00000474871 SGCBQ16585 318 aa4.55□□□□□ -1.68
NPHP3-206ENST00000474871 SYTL3Q4VX76 610 aa4.55□□□□□ -1.68
NPHP3-206ENST00000474871 SIRPB2Q5JXA9 342 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms