RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 HS3ST1O14792 307 aa12.55□□□□□ -0.4
CCDC78-209ENST00000474647 KLF4O43474 513 aa12.55□□□□□ -0.4
CCDC78-209ENST00000474647 SUPT7LO94864 414 aa12.55□□□□□ -0.4
CCDC78-209ENST00000474647 PPP3CBP16298 524 aa12.55□□□□□ -0.4
CCDC78-209ENST00000474647 TIA1P31483 386 aaKnown RBP eCLIP12.55□□□□□ -0.4
CCDC78-209ENST00000474647 MAGEA12P43365 314 aa12.55□□□□□ -0.4
CCDC78-209ENST00000474647 NCBP2P52298 156 aaKnown RBP eCLIP12.55□□□□□ -0.4
CCDC78-209ENST00000474647 DMTNQ08495 405 aa12.55□□□□□ -0.4
CCDC78-209ENST00000474647 TNK1Q13470 666 aa12.55□□□□□ -0.4
CCDC78-209ENST00000474647 RASA2Q15283 850 aa12.55□□□□□ -0.4
CCDC78-209ENST00000474647 GUSBP1Q15486 140 aa12.55□□□□□ -0.4
CCDC78-209ENST00000474647 SPIN4Q56A73 249 aa12.55□□□□□ -0.4
CCDC78-209ENST00000474647 GGNQ86UU5 652 aa12.55□□□□□ -0.4
CCDC78-209ENST00000474647 PAFAH2Q99487 392 aa12.55□□□□□ -0.4
CCDC78-209ENST00000474647 FUT8Q9BYC5 575 aa12.55□□□□□ -0.4
CCDC78-209ENST00000474647 ACPTQ9BZG2 426 aa12.55□□□□□ -0.4
CCDC78-209ENST00000474647 TBL1XR1Q9BZK7 514 aa12.55□□□□□ -0.4
CCDC78-209ENST00000474647 Q9N2J8 555 aa12.55□□□□□ -0.4
CCDC78-209ENST00000474647 FAM120CQ9NX05 1096 aaKnown RBP12.55□□□□□ -0.4
CCDC78-209ENST00000474647 LAMP3Q9UQV4 416 aa12.55□□□□□ -0.4
CCDC78-209ENST00000474647 AP4B1Q9Y6B7 739 aa12.55□□□□□ -0.4
CCDC78-209ENST00000474647 STAB1Q9NY15 2570 aa12.54□□□□□ -0.4
CCDC78-209ENST00000474647 RNF223E7ERA6 249 aa12.54□□□□□ -0.4
CCDC78-209ENST00000474647 POC1B-GALNT4F8VUJ3 575 aa12.54□□□□□ -0.4
CCDC78-209ENST00000474647 RIPK2O43353 540 aa12.54□□□□□ -0.4
CCDC78-209ENST00000474647 ULK1O75385 1050 aa12.54□□□□□ -0.4
CCDC78-209ENST00000474647 ERLIN1O75477 346 aa12.54□□□□□ -0.4
CCDC78-209ENST00000474647 ABHD2P08910 425 aa12.54□□□□□ -0.4
CCDC78-209ENST00000474647 COL6A2P12110 1019 aa12.54□□□□□ -0.4
CCDC78-209ENST00000474647 PAX1P15863 534 aa12.54□□□□□ -0.4
CCDC78-209ENST00000474647 HSD17B3P37058 310 aa12.54□□□□□ -0.4
CCDC78-209ENST00000474647 SLC6A8P48029 635 aa12.54□□□□□ -0.4
CCDC78-209ENST00000474647 HTR6P50406 440 aa12.54□□□□□ -0.4
CCDC78-209ENST00000474647 ZNHIT3Q15649 155 aaPredicted RBP12.54□□□□□ -0.4
CCDC78-209ENST00000474647 CLEC12BQ2HXU8 276 aa12.54□□□□□ -0.4
CCDC78-209ENST00000474647 CYP27C1Q4G0S4 372 aa12.54□□□□□ -0.4
CCDC78-209ENST00000474647 STAC2Q6ZMT1 411 aa12.54□□□□□ -0.4
CCDC78-209ENST00000474647 SH2D5Q6ZV89 423 aa12.54□□□□□ -0.4
CCDC78-209ENST00000474647 GPRIN3Q6ZVF9 776 aa12.54□□□□□ -0.4
CCDC78-209ENST00000474647 MREGQ8N565 214 aa12.54□□□□□ -0.4
CCDC78-209ENST00000474647 METTL6Q8TCB7 284 aa12.54□□□□□ -0.4
CCDC78-209ENST00000474647 IGFBPL1Q8WX77 278 aa12.54□□□□□ -0.4
CCDC78-209ENST00000474647 SLC9A6Q92581 669 aa12.54□□□□□ -0.4
CCDC78-209ENST00000474647 AKAP1Q92667 903 aaKnown RBP eCLIP12.54□□□□□ -0.4
CCDC78-209ENST00000474647 GMPPAQ96IJ6 420 aaPredicted RBP12.54□□□□□ -0.4
CCDC78-209ENST00000474647 C1QTNF3Q9BXJ4 246 aa12.54□□□□□ -0.4
CCDC78-209ENST00000474647 ACTR6Q9GZN1 396 aa12.54□□□□□ -0.4
CCDC78-209ENST00000474647 C12orf49Q9H741 205 aa12.54□□□□□ -0.4
CCDC78-209ENST00000474647 FANCFQ9NPI8 374 aa12.54□□□□□ -0.4
CCDC78-209ENST00000474647 MIEF1Q9NQG6 463 aa12.54□□□□□ -0.4
CCDC78-209ENST00000474647 ZNF701Q9NV72 531 aaPredicted RBP12.54□□□□□ -0.4
CCDC78-209ENST00000474647 DDX18Q9NVP1 670 aaKnown RBP12.54□□□□□ -0.4
CCDC78-209ENST00000474647 STOML1Q9UBI4 398 aa12.54□□□□□ -0.4
CCDC78-209ENST00000474647 MRTO4Q9UKD2 239 aaKnown RBP12.54□□□□□ -0.4
CCDC78-209ENST00000474647 MCTS1Q9ULC4 181 aaKnown RBP12.54□□□□□ -0.4
CCDC78-209ENST00000474647 TRIM49D1C9J1S8 452 aa12.53□□□□□ -0.4
CCDC78-209ENST00000474647 SS18L1O75177 396 aaPredicted RBP12.53□□□□□ -0.4
CCDC78-209ENST00000474647 SYNGR4O95473 234 aa12.53□□□□□ -0.4
CCDC78-209ENST00000474647 IL33O95760 270 aa12.53□□□□□ -0.4
CCDC78-209ENST00000474647 ANGPTL1O95841 491 aa12.53□□□□□ -0.4
CCDC78-209ENST00000474647 OPN1LWP04000 364 aa12.53□□□□□ -0.4
CCDC78-209ENST00000474647 ANXA4P09525 319 aaPredicted RBP12.53□□□□□ -0.4
CCDC78-209ENST00000474647 SBK3P0C264 359 aa12.53□□□□□ -0.4
CCDC78-209ENST00000474647 NTSP30990 170 aa12.53□□□□□ -0.4
CCDC78-209ENST00000474647 SERPINB9P50453 376 aa12.53□□□□□ -0.4
CCDC78-209ENST00000474647 PSMD4P55036 377 aaKnown RBP12.53□□□□□ -0.4
CCDC78-209ENST00000474647 RPS4XP62701 263 aaKnown RBP12.53□□□□□ -0.4
CCDC78-209ENST00000474647 KRTAP1-1Q07627 177 aa12.53□□□□□ -0.4
CCDC78-209ENST00000474647 ZNF763Q0D2J5 394 aa12.53□□□□□ -0.4
CCDC78-209ENST00000474647 C2orf80Q0P641 193 aa12.53□□□□□ -0.4
CCDC78-209ENST00000474647 CTU2Q2VPK5 515 aaKnown RBP12.53□□□□□ -0.4
CCDC78-209ENST00000474647 SPDYAQ5MJ70 313 aa12.53□□□□□ -0.4
CCDC78-209ENST00000474647 STK32CQ86UX6 486 aa12.53□□□□□ -0.4
CCDC78-209ENST00000474647 ZNF611Q8N823 705 aa12.53□□□□□ -0.4
CCDC78-209ENST00000474647 OR10D3Q8NH80 312 aa12.53□□□□□ -0.4
CCDC78-209ENST00000474647 TMEM237Q96Q45 408 aa12.53□□□□□ -0.4
CCDC78-209ENST00000474647 KCNA7Q96RP8 456 aa12.53□□□□□ -0.4
CCDC78-209ENST00000474647 ZNF382Q96SR6 550 aa12.53□□□□□ -0.4
CCDC78-209ENST00000474647 TACO1Q9BSH4 297 aaKnown RBP12.53□□□□□ -0.4
CCDC78-209ENST00000474647 PLSCR4Q9NRQ2 329 aa12.53□□□□□ -0.4
CCDC78-209ENST00000474647 CADP27708 2225 aa12.53□□□□□ -0.4
CCDC78-209ENST00000474647 HEATR1Q9H583 2144 aaKnown RBP12.52□□□□□ -0.4
CCDC78-209ENST00000474647 A0A087WUV0 522 aaPredicted RBP12.52□□□□□ -0.41
CCDC78-209ENST00000474647 A0A087WV62 115 aa12.52□□□□□ -0.41
CCDC78-209ENST00000474647 RNF212BA8MTL3 300 aa12.52□□□□□ -0.41
CCDC78-209ENST00000474647 MYO1GB0I1T2 1018 aa12.52□□□□□ -0.41
CCDC78-209ENST00000474647 TNFSF11O14788 317 aa12.52□□□□□ -0.41
CCDC78-209ENST00000474647 CLOCKO15516 846 aa12.52□□□□□ -0.41
CCDC78-209ENST00000474647 CXCL13O43927 109 aa12.52□□□□□ -0.41
CCDC78-209ENST00000474647 UTS2O95399 124 aa12.52□□□□□ -0.41
CCDC78-209ENST00000474647 TP53P04637 393 aaPredicted RBP12.52□□□□□ -0.41
CCDC78-209ENST00000474647 TAC1P20366 129 aa12.52□□□□□ -0.41
CCDC78-209ENST00000474647 DDCP20711 480 aa12.52□□□□□ -0.41
CCDC78-209ENST00000474647 C17orf67Q0P5P2 114 aa12.52□□□□□ -0.41
CCDC78-209ENST00000474647 CAPRIN1Q14444 709 aaKnown RBP12.52□□□□□ -0.41
CCDC78-209ENST00000474647 PRSS53Q2L4Q9 553 aa12.52□□□□□ -0.41
CCDC78-209ENST00000474647 GRAMD1BQ3KR37 738 aa12.52□□□□□ -0.41
CCDC78-209ENST00000474647 GLYR1Q49A26 553 aaPredicted RBP12.52□□□□□ -0.41
CCDC78-209ENST00000474647 UNC50Q53HI1 259 aa12.52□□□□□ -0.41
CCDC78-209ENST00000474647 ZNF678Q5SXM1 525 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms