RNA–Protein interactions for RNA: ENST00000474421.1

PDLIM4-206, Transcript of PDZ and LIM domain 4, humanhuman

TSL 3

Gene PDLIM4, Length 1,084 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-206ENST00000474421 PRKAG1P54619 331 aa18.38■□□□□ 0.53
PDLIM4-206ENST00000474421 FGFBP1Q14512 234 aa18.38■□□□□ 0.53
PDLIM4-206ENST00000474421 ZCCHC12Q6PEW1 402 aa18.38■□□□□ 0.53
PDLIM4-206ENST00000474421 PLXDC2Q6UX71 529 aa18.38■□□□□ 0.53
PDLIM4-206ENST00000474421 LRIG3Q6UXM1 1119 aa18.38■□□□□ 0.53
PDLIM4-206ENST00000474421 TRABD2AQ86V40 505 aa18.38■□□□□ 0.53
PDLIM4-206ENST00000474421 NUP43Q8NFH3 380 aa18.38■□□□□ 0.53
PDLIM4-206ENST00000474421 MBD6Q96DN6 1003 aa18.38■□□□□ 0.53
PDLIM4-206ENST00000474421 LIME1Q9H400 295 aa18.38■□□□□ 0.53
PDLIM4-206ENST00000474421 PLEKHA6Q9Y2H5 1048 aa18.38■□□□□ 0.53
PDLIM4-206ENST00000474421 ZNF337Q9Y3M9 751 aa18.38■□□□□ 0.53
PDLIM4-206ENST00000474421 ZNF175Q9Y473 711 aa18.38■□□□□ 0.53
PDLIM4-206ENST00000474421 TRAF6Q9Y4K3 522 aa18.38■□□□□ 0.53
PDLIM4-206ENST00000474421 AP4B1Q9Y6B7 739 aa18.38■□□□□ 0.53
PDLIM4-206ENST00000474421 GXYLT2A0PJZ3 443 aa18.37■□□□□ 0.53
PDLIM4-206ENST00000474421 OR2M5A3KFT3 312 aa18.37■□□□□ 0.53
PDLIM4-206ENST00000474421 SH3D21A4FU49 640 aa18.37■□□□□ 0.53
PDLIM4-206ENST00000474421 CASKO14936 926 aa18.37■□□□□ 0.53
PDLIM4-206ENST00000474421 EMC8O43402 210 aa18.37■□□□□ 0.53
PDLIM4-206ENST00000474421 NGFRP08138 427 aa18.37■□□□□ 0.53
PDLIM4-206ENST00000474421 ALDH3A1P30838 453 aa18.37■□□□□ 0.53
PDLIM4-206ENST00000474421 LCN1P31025 176 aa18.37■□□□□ 0.53
PDLIM4-206ENST00000474421 SERPINB5P36952 375 aa18.37■□□□□ 0.53
PDLIM4-206ENST00000474421 HPCAL1P37235 193 aa18.37■□□□□ 0.53
PDLIM4-206ENST00000474421 RPS3AP61247 264 aaKnown RBP18.37■□□□□ 0.53
PDLIM4-206ENST00000474421 IFFO1Q0D2I5 559 aa18.37■□□□□ 0.53
PDLIM4-206ENST00000474421 GRAMD1BQ3KR37 738 aa18.37■□□□□ 0.53
PDLIM4-206ENST00000474421 GALNTL6Q49A17 601 aa18.37■□□□□ 0.53
PDLIM4-206ENST00000474421 PAMR1Q6UXH9 720 aa18.37■□□□□ 0.53
PDLIM4-206ENST00000474421 SZRD1Q7Z422 152 aa18.37■□□□□ 0.53
PDLIM4-206ENST00000474421 CNEP1R1Q8N9A8 125 aa18.37■□□□□ 0.53
PDLIM4-206ENST00000474421 OR6Y1Q8NGX8 325 aa18.37■□□□□ 0.53
PDLIM4-206ENST00000474421 TWIST2Q8WVJ9 160 aa18.37■□□□□ 0.53
PDLIM4-206ENST00000474421 PIK3R3Q92569 461 aa18.37■□□□□ 0.53
PDLIM4-206ENST00000474421 SLC9A6Q92581 669 aa18.37■□□□□ 0.53
PDLIM4-206ENST00000474421 PPP3R2Q96LZ3 170 aa18.37■□□□□ 0.53
PDLIM4-206ENST00000474421 FAM111AQ96PZ2 611 aa18.37■□□□□ 0.53
PDLIM4-206ENST00000474421 ALPK1Q96QP1 1244 aa18.37■□□□□ 0.53
PDLIM4-206ENST00000474421 RTN4RQ9BZR6 473 aa18.37■□□□□ 0.53
PDLIM4-206ENST00000474421 BAIAP2L1Q9UHR4 511 aa18.37■□□□□ 0.53
PDLIM4-206ENST00000474421 SETD2Q9BYW2 2564 aaPredicted RBP18.37■□□□□ 0.53
PDLIM4-206ENST00000474421 ALG1L2C9J202 215 aa18.36■□□□□ 0.53
PDLIM4-206ENST00000474421 H3BML4 177 aa18.36■□□□□ 0.53
PDLIM4-206ENST00000474421 SEC14L5O43304 696 aa18.36■□□□□ 0.53
PDLIM4-206ENST00000474421 HSPA4LO95757 839 aa18.36■□□□□ 0.53
PDLIM4-206ENST00000474421 RAF1P04049 648 aa18.36■□□□□ 0.53
PDLIM4-206ENST00000474421 CHRNGP07510 517 aa18.36■□□□□ 0.53
PDLIM4-206ENST00000474421 BCKDHAP12694 445 aa18.36■□□□□ 0.53
PDLIM4-206ENST00000474421 CPOXP36551 454 aa18.36■□□□□ 0.53
PDLIM4-206ENST00000474421 MLC1Q15049 377 aa18.36■□□□□ 0.53
PDLIM4-206ENST00000474421 CPEB4Q17RY0 729 aaKnown RBP eCLIP18.36■□□□□ 0.53
PDLIM4-206ENST00000474421 ZNF385BQ569K4 471 aa18.36■□□□□ 0.53
PDLIM4-206ENST00000474421 ARL13AQ5H913 290 aaPredicted RBP18.36■□□□□ 0.53
PDLIM4-206ENST00000474421 OR2W6PQ8NHA6 318 aa18.36■□□□□ 0.53
PDLIM4-206ENST00000474421 CLHC1Q8NHS4 586 aa18.36■□□□□ 0.53
PDLIM4-206ENST00000474421 SMPDL3BQ92485 455 aa18.36■□□□□ 0.53
PDLIM4-206ENST00000474421 STARD4Q96DR4 205 aa18.36■□□□□ 0.53
PDLIM4-206ENST00000474421 ROPN1BQ9BZX4 212 aaPredicted RBP18.36■□□□□ 0.53
PDLIM4-206ENST00000474421 ROPN1Q9HAT0 212 aaPredicted RBP18.36■□□□□ 0.53
PDLIM4-206ENST00000474421 LGALS13Q9UHV8 139 aa18.36■□□□□ 0.53
PDLIM4-206ENST00000474421 GIMAP1-GIMAP5A0A087WTJ2 511 aa18.35■□□□□ 0.53
PDLIM4-206ENST00000474421 A0A087WZY1 265 aa18.35■□□□□ 0.53
PDLIM4-206ENST00000474421 NDUFB5O43674 189 aa18.35■□□□□ 0.53
PDLIM4-206ENST00000474421 SMNDC1O75940 238 aaKnown RBP eCLIP18.35■□□□□ 0.53
PDLIM4-206ENST00000474421 IGKV1D-16P01601 117 aa18.35■□□□□ 0.53
PDLIM4-206ENST00000474421 ALOX5P09917 674 aa18.35■□□□□ 0.53
PDLIM4-206ENST00000474421 FCGR2AP12318 317 aa18.35■□□□□ 0.53
PDLIM4-206ENST00000474421 CD99P14209 185 aa18.35■□□□□ 0.53
PDLIM4-206ENST00000474421 HPGDP15428 266 aa18.35■□□□□ 0.53
PDLIM4-206ENST00000474421 ZNF17P17021 662 aa18.35■□□□□ 0.53
PDLIM4-206ENST00000474421 TBXA2RP21731 343 aa18.35■□□□□ 0.53
PDLIM4-206ENST00000474421 SERPINB4P48594 390 aa18.35■□□□□ 0.53
PDLIM4-206ENST00000474421 PRIM2P49643 509 aa18.35■□□□□ 0.53
PDLIM4-206ENST00000474421 CLDN15P56746 228 aa18.35■□□□□ 0.53
PDLIM4-206ENST00000474421 PPP2R2AP63151 447 aa18.35■□□□□ 0.53
PDLIM4-206ENST00000474421 UGT3A2Q3SY77 523 aa18.35■□□□□ 0.53
PDLIM4-206ENST00000474421 MFSD12Q6NUT3 480 aa18.35■□□□□ 0.53
PDLIM4-206ENST00000474421 APOOLQ6UXV4 268 aa18.35■□□□□ 0.53
PDLIM4-206ENST00000474421 TGIF2LYQ8IUE0 185 aa18.35■□□□□ 0.53
PDLIM4-206ENST00000474421 MISPQ8IVT2 679 aa18.35■□□□□ 0.53
PDLIM4-206ENST00000474421 METTL25Q8N6Q8 603 aa18.35■□□□□ 0.53
PDLIM4-206ENST00000474421 GIMAP5Q96F15 307 aa18.35■□□□□ 0.53
PDLIM4-206ENST00000474421 PGM2Q96G03 612 aa18.35■□□□□ 0.53
PDLIM4-206ENST00000474421 SLC39A3Q9BRY0 314 aa18.35■□□□□ 0.53
PDLIM4-206ENST00000474421 PINK1Q9BXM7 581 aa18.35■□□□□ 0.53
PDLIM4-206ENST00000474421 ANKZF1Q9H8Y5 726 aa18.35■□□□□ 0.53
PDLIM4-206ENST00000474421 ATP6V1HQ9UI12 483 aa18.35■□□□□ 0.53
PDLIM4-206ENST00000474421 EIF3LQ9Y262 564 aaKnown RBP18.35■□□□□ 0.53
PDLIM4-206ENST00000474421 ZFHX3Q15911 3703 aa18.35■□□□□ 0.53
PDLIM4-206ENST00000474421 TMEM233B4DJY2 109 aa18.34■□□□□ 0.53
PDLIM4-206ENST00000474421 PIP5K1BO14986 540 aa18.34■□□□□ 0.53
PDLIM4-206ENST00000474421 KCNK2O95069 426 aa18.34■□□□□ 0.53
PDLIM4-206ENST00000474421 OXSR1O95747 527 aaPredicted RBP18.34■□□□□ 0.53
PDLIM4-206ENST00000474421 SUCLG1P53597 346 aaKnown RBP18.34■□□□□ 0.53
PDLIM4-206ENST00000474421 KEAP1Q14145 624 aa18.34■□□□□ 0.53
PDLIM4-206ENST00000474421 TMEM44Q2T9K0 475 aa18.34■□□□□ 0.53
PDLIM4-206ENST00000474421 EXOC3L1Q86VI1 746 aa18.34■□□□□ 0.53
PDLIM4-206ENST00000474421 NATD1Q8N6N6 113 aa18.34■□□□□ 0.53
PDLIM4-206ENST00000474421 OR5M1Q8NGP8 315 aa18.34■□□□□ 0.53
PDLIM4-206ENST00000474421 FAM110BQ8TC76 370 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms