RNA–Protein interactions for RNA: ENST00000474056.5

UPF3A-203, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 748 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-203ENST00000474056 PRPS1L1P21108 318 aa16.25■□□□□ 0.19
UPF3A-203ENST00000474056 SSTR2P30874 369 aa16.25■□□□□ 0.19
UPF3A-203ENST00000474056 PRIM2P49643 509 aa16.25■□□□□ 0.19
UPF3A-203ENST00000474056 CLK3P49761 638 aaKnown RBP16.25■□□□□ 0.19
UPF3A-203ENST00000474056 DIO3P55073 304 aa16.25■□□□□ 0.19
UPF3A-203ENST00000474056 CLDN18P56856 261 aa16.25■□□□□ 0.19
UPF3A-203ENST00000474056 WDR4P57081 412 aaKnown RBP16.25■□□□□ 0.19
UPF3A-203ENST00000474056 B3GALT5-AS1P59052 145 aa16.25■□□□□ 0.19
UPF3A-203ENST00000474056 BST1Q10588 318 aa16.25■□□□□ 0.19
UPF3A-203ENST00000474056 RCAN2Q14206 197 aa16.25■□□□□ 0.19
UPF3A-203ENST00000474056 SMU1Q2TAY7 513 aa16.25■□□□□ 0.19
UPF3A-203ENST00000474056 BEND6Q5SZJ8 279 aaPredicted RBP16.25■□□□□ 0.19
UPF3A-203ENST00000474056 HHATQ5VTY9 493 aa16.25■□□□□ 0.19
UPF3A-203ENST00000474056 AAGABQ6PD74 315 aa16.25■□□□□ 0.19
UPF3A-203ENST00000474056 ZCCHC12Q6PEW1 402 aa16.25■□□□□ 0.19
UPF3A-203ENST00000474056 POMZP3Q6PJE2 187 aa16.25■□□□□ 0.19
UPF3A-203ENST00000474056 ADGRE4PQ86SQ3 457 aa16.25■□□□□ 0.19
UPF3A-203ENST00000474056 COX18Q8N8Q8 333 aa16.25■□□□□ 0.19
UPF3A-203ENST00000474056 C9orf106Q8NAJ2 232 aa16.25■□□□□ 0.19
UPF3A-203ENST00000474056 PSMA8Q8TAA3 256 aa16.25■□□□□ 0.19
UPF3A-203ENST00000474056 FAM110BQ8TC76 370 aa16.25■□□□□ 0.19
UPF3A-203ENST00000474056 DUSP19Q8WTR2 217 aa16.25■□□□□ 0.19
UPF3A-203ENST00000474056 OR5P2Q8WZ92 322 aa16.25■□□□□ 0.19
UPF3A-203ENST00000474056 LURAP1Q96LR2 239 aa16.25■□□□□ 0.19
UPF3A-203ENST00000474056 G6PC3Q9BUM1 346 aa16.25■□□□□ 0.19
UPF3A-203ENST00000474056 DUSP26Q9BV47 211 aa16.25■□□□□ 0.19
UPF3A-203ENST00000474056 NUF2Q9BZD4 464 aa16.25■□□□□ 0.19
UPF3A-203ENST00000474056 TBL1XR1Q9BZK7 514 aa16.25■□□□□ 0.19
UPF3A-203ENST00000474056 BHLHE41Q9C0J9 482 aaPredicted RBP16.25■□□□□ 0.19
UPF3A-203ENST00000474056 CALHM2Q9HA72 323 aa16.25■□□□□ 0.19
UPF3A-203ENST00000474056 SDHAF3Q9NRP4 125 aa16.25■□□□□ 0.19
UPF3A-203ENST00000474056 PNPOQ9NVS9 261 aa16.25■□□□□ 0.19
UPF3A-203ENST00000474056 DVL2O14641 736 aa16.24■□□□□ 0.19
UPF3A-203ENST00000474056 SNUPNO95149 360 aaKnown RBP16.24■□□□□ 0.19
UPF3A-203ENST00000474056 ZNF708P17019 499 aa16.24■□□□□ 0.19
UPF3A-203ENST00000474056 HK1P19367 917 aa16.24■□□□□ 0.19
UPF3A-203ENST00000474056 CHMP24386 653 aa16.24■□□□□ 0.19
UPF3A-203ENST00000474056 CCT3P49368 545 aaKnown RBP16.24■□□□□ 0.19
UPF3A-203ENST00000474056 DLX5P56178 289 aa16.24■□□□□ 0.19
UPF3A-203ENST00000474056 CLDN8P56748 225 aa16.24■□□□□ 0.19
UPF3A-203ENST00000474056 C21orf58P58505 322 aa16.24■□□□□ 0.19
UPF3A-203ENST00000474056 KRTAP10-9P60411 292 aa16.24■□□□□ 0.19
UPF3A-203ENST00000474056 TLE4Q04727 773 aa16.24■□□□□ 0.19
UPF3A-203ENST00000474056 TP53BP2Q13625 1128 aa16.24■□□□□ 0.19
UPF3A-203ENST00000474056 GANABQ14697 944 aaKnown RBP16.24■□□□□ 0.19
UPF3A-203ENST00000474056 CCNJQ5T5M9 372 aa16.24■□□□□ 0.19
UPF3A-203ENST00000474056 NATD1Q8N6N6 113 aa16.24■□□□□ 0.19
UPF3A-203ENST00000474056 MGARPQ8TDB4 240 aa16.24■□□□□ 0.19
UPF3A-203ENST00000474056 CHMP6Q96FZ7 201 aa16.24■□□□□ 0.19
UPF3A-203ENST00000474056 PRPF18Q99633 342 aaKnown RBP16.24■□□□□ 0.19
UPF3A-203ENST00000474056 MYO9AB2RTY4 2548 aa16.24■□□□□ 0.19
UPF3A-203ENST00000474056 CLCA1A8K7I4 914 aa16.23■□□□□ 0.19
UPF3A-203ENST00000474056 ALG1L2C9J202 215 aa16.23■□□□□ 0.19
UPF3A-203ENST00000474056 GMFGO60234 142 aa16.23■□□□□ 0.19
UPF3A-203ENST00000474056 AGFG1P52594 562 aaKnown RBP16.23■□□□□ 0.19
UPF3A-203ENST00000474056 POU6F2P78424 691 aaPredicted RBP16.23■□□□□ 0.19
UPF3A-203ENST00000474056 SNTB1Q13884 538 aaKnown RBP16.23■□□□□ 0.19
UPF3A-203ENST00000474056 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.23■□□□□ 0.19
UPF3A-203ENST00000474056 LSM12Q3MHD2 195 aaKnown RBP16.23■□□□□ 0.19
UPF3A-203ENST00000474056 RAET1LQ5VY80 246 aa16.23■□□□□ 0.19
UPF3A-203ENST00000474056 OR4F3Q6IEY1 312 aa16.23■□□□□ 0.19
UPF3A-203ENST00000474056 CDC73Q6P1J9 531 aa16.23■□□□□ 0.19
UPF3A-203ENST00000474056 CAMKMTQ7Z624 323 aa16.23■□□□□ 0.19
UPF3A-203ENST00000474056 LURAP1LQ8IV03 231 aa16.23■□□□□ 0.19
UPF3A-203ENST00000474056 GATSQ8NAP1 163 aa16.23■□□□□ 0.19
UPF3A-203ENST00000474056 OR56A1Q8NGH5 318 aa16.23■□□□□ 0.19
UPF3A-203ENST00000474056 OR5M1Q8NGP8 315 aa16.23■□□□□ 0.19
UPF3A-203ENST00000474056 OR4C3Q8NH37 302 aa16.23■□□□□ 0.19
UPF3A-203ENST00000474056 OR5AK3PQ8NH89 298 aa16.23■□□□□ 0.19
UPF3A-203ENST00000474056 CDS1Q92903 461 aa16.23■□□□□ 0.19
UPF3A-203ENST00000474056 C1GALT1C1Q96EU7 318 aa16.23■□□□□ 0.19
UPF3A-203ENST00000474056 STACQ99469 402 aa16.23■□□□□ 0.19
UPF3A-203ENST00000474056 PTGES2Q9H7Z7 377 aa16.23■□□□□ 0.19
UPF3A-203ENST00000474056 NEUROD4Q9HD90 331 aa16.23■□□□□ 0.19
UPF3A-203ENST00000474056 DUSP22Q9NRW4 184 aa16.23■□□□□ 0.19
UPF3A-203ENST00000474056 GPATCH2Q9NW75 528 aa16.23■□□□□ 0.19
UPF3A-203ENST00000474056 CLCF1Q9UBD9 225 aa16.23■□□□□ 0.19
UPF3A-203ENST00000474056 ZNF629Q9UEG4 869 aaPredicted RBP16.23■□□□□ 0.19
UPF3A-203ENST00000474056 ANKHD1Q8IWZ3 2542 aaKnown RBP16.22■□□□□ 0.19
UPF3A-203ENST00000474056 POLQO75417 2590 aa16.22■□□□□ 0.19
UPF3A-203ENST00000474056 PDZD2O15018 2839 aa16.22■□□□□ 0.19
UPF3A-203ENST00000474056 IGLV3-32A0A0A0MS00 114 aa16.22■□□□□ 0.19
UPF3A-203ENST00000474056 CFLARO15519 480 aa16.22■□□□□ 0.19
UPF3A-203ENST00000474056 NGFRP08138 427 aa16.22■□□□□ 0.19
UPF3A-203ENST00000474056 ASCL1P50553 236 aa16.22■□□□□ 0.19
UPF3A-203ENST00000474056 MAGOHP61326 146 aaKnown RBP16.22■□□□□ 0.19
UPF3A-203ENST00000474056 HBA1P69905 142 aa16.22■□□□□ 0.19
UPF3A-203ENST00000474056 C17orf67Q0P5P2 114 aa16.22■□□□□ 0.19
UPF3A-203ENST00000474056 PGS1Q32NB8 556 aa16.22■□□□□ 0.19
UPF3A-203ENST00000474056 SPDYE7PQ495Y7 208 aa16.22■□□□□ 0.19
UPF3A-203ENST00000474056 CLECL1Q8IZS7 167 aa16.22■□□□□ 0.19
UPF3A-203ENST00000474056 KIRREL3Q8IZU9 778 aa16.22■□□□□ 0.19
UPF3A-203ENST00000474056 SFXN5Q8TD22 340 aa16.22■□□□□ 0.19
UPF3A-203ENST00000474056 TLCD1Q96CP7 247 aa16.22■□□□□ 0.19
UPF3A-203ENST00000474056 SH3GL2Q99962 352 aa16.22■□□□□ 0.19
UPF3A-203ENST00000474056 BTBD2Q9BX70 525 aa16.22■□□□□ 0.19
UPF3A-203ENST00000474056 ACTRT3Q9BYD9 372 aa16.22■□□□□ 0.19
UPF3A-203ENST00000474056 DPY30Q9C005 99 aa16.22■□□□□ 0.19
UPF3A-203ENST00000474056 PIGUQ9H490 435 aa16.22■□□□□ 0.19
UPF3A-203ENST00000474056 MEAF6Q9HAF1 191 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms