RNA–Protein interactions for RNA: ENST00000473829.1

PTCD3-210, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-210ENST00000473829 OR9I1Q8NGQ6 314 aa17.21■□□□□ 0.35
PTCD3-210ENST00000473829 ADAMTS15Q8TE58 950 aa17.21■□□□□ 0.35
PTCD3-210ENST00000473829 MAGEB18Q96M61 343 aa17.21■□□□□ 0.35
PTCD3-210ENST00000473829 CCDC115Q96NT0 180 aa17.21■□□□□ 0.35
PTCD3-210ENST00000473829 DSN1Q9H410 356 aa17.21■□□□□ 0.35
PTCD3-210ENST00000473829 SDR39U1Q9NRG7 319 aaPredicted RBP17.21■□□□□ 0.35
PTCD3-210ENST00000473829 FAF1Q9UNN5 650 aaPredicted RBP17.21■□□□□ 0.35
PTCD3-210ENST00000473829 FIGNL2A6NMB9 653 aa17.2■□□□□ 0.34
PTCD3-210ENST00000473829 KDM4EB2RXH2 506 aaPredicted RBP17.2■□□□□ 0.34
PTCD3-210ENST00000473829 UBDO15205 165 aa17.2■□□□□ 0.34
PTCD3-210ENST00000473829 ANGPTL1O95841 491 aa17.2■□□□□ 0.34
PTCD3-210ENST00000473829 PGRP06401 933 aa17.2■□□□□ 0.34
PTCD3-210ENST00000473829 NGFRP08138 427 aa17.2■□□□□ 0.34
PTCD3-210ENST00000473829 SRD5A2P31213 254 aa17.2■□□□□ 0.34
PTCD3-210ENST00000473829 CDKN2CP42773 168 aa17.2■□□□□ 0.34
PTCD3-210ENST00000473829 DCST2Q5T1A1 773 aa17.2■□□□□ 0.34
PTCD3-210ENST00000473829 C1orf185Q5T7R7 199 aa17.2■□□□□ 0.34
PTCD3-210ENST00000473829 ULK2Q8IYT8 1036 aa17.2■□□□□ 0.34
PTCD3-210ENST00000473829 EID3Q8N140 333 aa17.2■□□□□ 0.34
PTCD3-210ENST00000473829 GATSQ8NAP1 163 aa17.2■□□□□ 0.34
PTCD3-210ENST00000473829 OR4K17Q8NGC6 315 aa17.2■□□□□ 0.34
PTCD3-210ENST00000473829 OR14L1PQ8NHC6 308 aa17.2■□□□□ 0.34
PTCD3-210ENST00000473829 DUSP19Q8WTR2 217 aa17.2■□□□□ 0.34
PTCD3-210ENST00000473829 SLC35G5Q96KT7 338 aa17.2■□□□□ 0.34
PTCD3-210ENST00000473829 INPP5KQ9BT40 448 aa17.2■□□□□ 0.34
PTCD3-210ENST00000473829 TBL1XR1Q9BZK7 514 aa17.2■□□□□ 0.34
PTCD3-210ENST00000473829 TAS2R10Q9NYW0 307 aa17.2■□□□□ 0.34
PTCD3-210ENST00000473829 MED11Q9P086 117 aa17.2■□□□□ 0.34
PTCD3-210ENST00000473829 BTNL2Q9UIR0 455 aa17.2■□□□□ 0.34
PTCD3-210ENST00000473829 PCDHGB4Q9UN71 923 aa17.2■□□□□ 0.34
PTCD3-210ENST00000473829 CACNA1CQ13936 2221 aa17.2■□□□□ 0.34
PTCD3-210ENST00000473829 UQCRHLA0A096LP55 91 aa17.19■□□□□ 0.34
PTCD3-210ENST00000473829 NPIPA5A0A0B4J1W7 369 aa17.19■□□□□ 0.34
PTCD3-210ENST00000473829 ALG1L2C9J202 215 aa17.19■□□□□ 0.34
PTCD3-210ENST00000473829 NPIPA7E9PJI5 369 aa17.19■□□□□ 0.34
PTCD3-210ENST00000473829 ZIC3O60481 467 aa17.19■□□□□ 0.34
PTCD3-210ENST00000473829 WDR1O75083 606 aa17.19■□□□□ 0.34
PTCD3-210ENST00000473829 TGDSO95455 350 aa17.19■□□□□ 0.34
PTCD3-210ENST00000473829 KRT16P08779 473 aa17.19■□□□□ 0.34
PTCD3-210ENST00000473829 NPIPA8P0DM63 369 aa17.19■□□□□ 0.34
PTCD3-210ENST00000473829 TBXA2RP21731 343 aa17.19■□□□□ 0.34
PTCD3-210ENST00000473829 MATN1P21941 496 aa17.19■□□□□ 0.34
PTCD3-210ENST00000473829 UQCRC2P22695 453 aa17.19■□□□□ 0.34
PTCD3-210ENST00000473829 DPP4P27487 766 aa17.19■□□□□ 0.34
PTCD3-210ENST00000473829 GRNP28799 593 aaKnown RBP17.19■□□□□ 0.34
PTCD3-210ENST00000473829 SMSP52788 366 aa17.19■□□□□ 0.34
PTCD3-210ENST00000473829 AQP5P55064 265 aa17.19■□□□□ 0.34
PTCD3-210ENST00000473829 GFRA1P56159 465 aa17.19■□□□□ 0.34
PTCD3-210ENST00000473829 PMPCAQ10713 525 aa17.19■□□□□ 0.34
PTCD3-210ENST00000473829 GSTA3Q16772 222 aa17.19■□□□□ 0.34
PTCD3-210ENST00000473829 SAXO2Q658L1 398 aa17.19■□□□□ 0.34
PTCD3-210ENST00000473829 BHLHB9Q6PI77 547 aa17.19■□□□□ 0.34
PTCD3-210ENST00000473829 XKRXQ6PP77 449 aa17.19■□□□□ 0.34
PTCD3-210ENST00000473829 VPS37AQ8NEZ2 397 aa17.19■□□□□ 0.34
PTCD3-210ENST00000473829 GOT1L1Q8NHS2 421 aaPredicted RBP17.19■□□□□ 0.34
PTCD3-210ENST00000473829 OR52E6Q96RD3 313 aa17.19■□□□□ 0.34
PTCD3-210ENST00000473829 ZBTB18Q99592 522 aa17.19■□□□□ 0.34
PTCD3-210ENST00000473829 TTYH2Q9BSA4 534 aa17.19■□□□□ 0.34
PTCD3-210ENST00000473829 PRDM14Q9GZV8 571 aa17.19■□□□□ 0.34
PTCD3-210ENST00000473829 ACBD3Q9H3P7 528 aa17.19■□□□□ 0.34
PTCD3-210ENST00000473829 TCF7L2Q9NQB0 619 aa17.19■□□□□ 0.34
PTCD3-210ENST00000473829 ALKBH4Q9NXW9 302 aa17.19■□□□□ 0.34
PTCD3-210ENST00000473829 DKKL1Q9UK85 242 aa17.19■□□□□ 0.34
PTCD3-210ENST00000473829 RPH3AQ9Y2J0 694 aaPredicted RBP17.19■□□□□ 0.34
PTCD3-210ENST00000473829 IGLV3-32A0A0A0MS00 114 aa17.18■□□□□ 0.34
PTCD3-210ENST00000473829 GMFGO60234 142 aa17.18■□□□□ 0.34
PTCD3-210ENST00000473829 SLC22A3O75751 556 aa17.18■□□□□ 0.34
PTCD3-210ENST00000473829 GLI4P10075 376 aa17.18■□□□□ 0.34
PTCD3-210ENST00000473829 AGAP20933 346 aa17.18■□□□□ 0.34
PTCD3-210ENST00000473829 LCN1P31025 176 aa17.18■□□□□ 0.34
PTCD3-210ENST00000473829 CLK3P49761 638 aaKnown RBP17.18■□□□□ 0.34
PTCD3-210ENST00000473829 RNF144AP50876 292 aaPredicted RBP17.18■□□□□ 0.34
PTCD3-210ENST00000473829 B3GALT5-AS1P59052 145 aa17.18■□□□□ 0.34
PTCD3-210ENST00000473829 ART3Q13508 389 aa17.18■□□□□ 0.34
PTCD3-210ENST00000473829 CD226Q15762 336 aa17.18■□□□□ 0.34
PTCD3-210ENST00000473829 B3GNT6Q6ZMB0 384 aa17.18■□□□□ 0.34
PTCD3-210ENST00000473829 SEM1Q6ZVN7 128 aa17.18■□□□□ 0.34
PTCD3-210ENST00000473829 ACAD11Q709F0 780 aa17.18■□□□□ 0.34
PTCD3-210ENST00000473829 OLIG3Q7RTU3 272 aa17.18■□□□□ 0.34
PTCD3-210ENST00000473829 IFNEQ86WN2 208 aa17.18■□□□□ 0.34
PTCD3-210ENST00000473829 GLB1L3Q8NCI6 653 aaPredicted RBP17.18■□□□□ 0.34
PTCD3-210ENST00000473829 MIPOL1Q8TD10 442 aa17.18■□□□□ 0.34
PTCD3-210ENST00000473829 ABTB1Q969K4 478 aaPredicted RBP17.18■□□□□ 0.34
PTCD3-210ENST00000473829 SDCCAG3Q96C92 435 aa17.18■□□□□ 0.34
PTCD3-210ENST00000473829 THOC1Q96FV9 657 aaKnown RBP17.18■□□□□ 0.34
PTCD3-210ENST00000473829 WDYHV1Q96HA8 205 aa17.18■□□□□ 0.34
PTCD3-210ENST00000473829 KLHDC3Q9BQ90 382 aa17.18■□□□□ 0.34
PTCD3-210ENST00000473829 SLC35A5Q9BS91 424 aa17.18■□□□□ 0.34
PTCD3-210ENST00000473829 G6PC3Q9BUM1 346 aa17.18■□□□□ 0.34
PTCD3-210ENST00000473829 OR51I1Q9H343 314 aa17.18■□□□□ 0.34
PTCD3-210ENST00000473829 SDHAF3Q9NRP4 125 aa17.18■□□□□ 0.34
PTCD3-210ENST00000473829 UBQLN4Q9NRR5 601 aa17.18■□□□□ 0.34
PTCD3-210ENST00000473829 SLC6A13Q9NSD5 602 aa17.18■□□□□ 0.34
PTCD3-210ENST00000473829 ZIM2Q9NZV7 527 aa17.18■□□□□ 0.34
PTCD3-210ENST00000473829 CAMK2AQ9UQM7 478 aa17.18■□□□□ 0.34
PTCD3-210ENST00000473829 RNF6Q9Y252 685 aa17.18■□□□□ 0.34
PTCD3-210ENST00000473829 PCDHGB3Q9Y5G1 929 aa17.18■□□□□ 0.34
PTCD3-210ENST00000473829 PRSS44E7EML9 344 aa17.17■□□□□ 0.34
PTCD3-210ENST00000473829 POLR3GO15318 223 aaPredicted RBP17.17■□□□□ 0.34
PTCD3-210ENST00000473829 ACTL6AO96019 429 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms