RNA–Protein interactions for RNA: ENST00000473684.5

TMEM39A-206, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 3,043 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-206ENST00000473684 ARHGEF7Q14155 803 aa4.81□□□□□ -1.64
TMEM39A-206ENST00000473684 PGM5Q15124 567 aa4.81□□□□□ -1.64
TMEM39A-206ENST00000473684 OR8G1Q15617 311 aa4.81□□□□□ -1.64
TMEM39A-206ENST00000473684 USF2Q15853 346 aaPredicted RBP4.81□□□□□ -1.64
TMEM39A-206ENST00000473684 CD300LDQ6UXZ3 194 aa4.81□□□□□ -1.64
TMEM39A-206ENST00000473684 TMEM179BQ7Z7N9 219 aa4.81□□□□□ -1.64
TMEM39A-206ENST00000473684 IFNL2Q8IZJ0 200 aa4.81□□□□□ -1.64
TMEM39A-206ENST00000473684 PRSS35Q8N3Z0 413 aa4.81□□□□□ -1.64
TMEM39A-206ENST00000473684 FSTL5Q8N475 847 aaPredicted RBP4.81□□□□□ -1.64
TMEM39A-206ENST00000473684 OR52N2Q8NGI0 321 aa4.81□□□□□ -1.64
TMEM39A-206ENST00000473684 OR9Q1Q8NGQ5 310 aa4.81□□□□□ -1.64
TMEM39A-206ENST00000473684 TMEM163Q8TC26 289 aa4.81□□□□□ -1.64
TMEM39A-206ENST00000473684 RHBDF1Q96CC6 855 aa4.81□□□□□ -1.64
TMEM39A-206ENST00000473684 MS4A4EQ96PG1 132 aa4.81□□□□□ -1.64
TMEM39A-206ENST00000473684 ACCSQ96QU6 501 aa4.81□□□□□ -1.64
TMEM39A-206ENST00000473684 GPR22Q99680 433 aa4.81□□□□□ -1.64
TMEM39A-206ENST00000473684 RIOX1Q9H6W3 641 aa4.81□□□□□ -1.64
TMEM39A-206ENST00000473684 CTPS2Q9NRF8 586 aa4.81□□□□□ -1.64
TMEM39A-206ENST00000473684 MED17Q9NVC6 651 aa4.81□□□□□ -1.64
TMEM39A-206ENST00000473684 SAGE1Q9NXZ1 904 aa4.81□□□□□ -1.64
TMEM39A-206ENST00000473684 CNOT2Q9NZN8 540 aaKnown RBP4.81□□□□□ -1.64
TMEM39A-206ENST00000473684 COX16Q9P0S2 106 aa4.81□□□□□ -1.64
TMEM39A-206ENST00000473684 PLEKHB1Q9UF11 243 aaPredicted RBP4.81□□□□□ -1.64
TMEM39A-206ENST00000473684 CNTN6Q9UQ52 1028 aa4.81□□□□□ -1.64
TMEM39A-206ENST00000473684 SLC22A14Q9Y267 594 aa4.81□□□□□ -1.64
TMEM39A-206ENST00000473684 PPIL1Q9Y3C6 166 aa4.81□□□□□ -1.64
TMEM39A-206ENST00000473684 ZNF638Q14966 1978 aaKnown RBP4.81□□□□□ -1.64
TMEM39A-206ENST00000473684 SCN9AQ15858 1988 aa4.81□□□□□ -1.64
TMEM39A-206ENST00000473684 GTPBP1O00178 669 aaKnown RBP4.8□□□□□ -1.64
TMEM39A-206ENST00000473684 HSPA12AO43301 675 aa4.8□□□□□ -1.64
TMEM39A-206ENST00000473684 SSNA1O43805 119 aa4.8□□□□□ -1.64
TMEM39A-206ENST00000473684 SOCS5O75159 536 aa4.8□□□□□ -1.64
TMEM39A-206ENST00000473684 GATBO75879 557 aaKnown RBP4.8□□□□□ -1.64
TMEM39A-206ENST00000473684 ENDOD1O94919 500 aa4.8□□□□□ -1.64
TMEM39A-206ENST00000473684 AKR7A3O95154 331 aa4.8□□□□□ -1.64
TMEM39A-206ENST00000473684 SIX6O95475 246 aa4.8□□□□□ -1.64
TMEM39A-206ENST00000473684 GIPP09681 153 aaPredicted RBP4.8□□□□□ -1.64
TMEM39A-206ENST00000473684 YWHAQP27348 245 aa4.8□□□□□ -1.64
TMEM39A-206ENST00000473684 S100A2P29034 98 aa4.8□□□□□ -1.64
TMEM39A-206ENST00000473684 SFNP31947 248 aa4.8□□□□□ -1.64
TMEM39A-206ENST00000473684 MPIP34949 423 aa4.8□□□□□ -1.64
TMEM39A-206ENST00000473684 MAP3K8P41279 467 aa4.8□□□□□ -1.64
TMEM39A-206ENST00000473684 WASP42768 502 aa4.8□□□□□ -1.64
TMEM39A-206ENST00000473684 CCR6P51684 374 aa4.8□□□□□ -1.64
TMEM39A-206ENST00000473684 EPHB3P54753 998 aa4.8□□□□□ -1.64
TMEM39A-206ENST00000473684 RAP2BP61225 183 aa4.8□□□□□ -1.64
TMEM39A-206ENST00000473684 RAP1AP62834 184 aa4.8□□□□□ -1.64
TMEM39A-206ENST00000473684 MALLQ13021 153 aa4.8□□□□□ -1.64
TMEM39A-206ENST00000473684 PTPRCAPQ14761 206 aa4.8□□□□□ -1.64
TMEM39A-206ENST00000473684 TRAM1Q15629 374 aa4.8□□□□□ -1.64
TMEM39A-206ENST00000473684 SSX1Q16384 188 aa4.8□□□□□ -1.64
TMEM39A-206ENST00000473684 DPYSL2Q16555 572 aa4.8□□□□□ -1.64
TMEM39A-206ENST00000473684 FAM69AQ5T7M9 428 aa4.8□□□□□ -1.64
TMEM39A-206ENST00000473684 CNIH2Q6PI25 160 aa4.8□□□□□ -1.64
TMEM39A-206ENST00000473684 GSG1LQ6UXU4 331 aa4.8□□□□□ -1.64
TMEM39A-206ENST00000473684 SPATA19Q7Z5L4 167 aa4.8□□□□□ -1.64
TMEM39A-206ENST00000473684 PRSS58Q8IYP2 241 aa4.8□□□□□ -1.64
TMEM39A-206ENST00000473684 RTL3Q8N8U3 475 aaKnown RBP4.8□□□□□ -1.64
TMEM39A-206ENST00000473684 DENND6BQ8NEG7 585 aa4.8□□□□□ -1.64
TMEM39A-206ENST00000473684 OR8J3Q8NGG0 315 aa4.8□□□□□ -1.64
TMEM39A-206ENST00000473684 OR5T3Q8NGG3 340 aa4.8□□□□□ -1.64
TMEM39A-206ENST00000473684 OR10K1Q8NGX5 313 aa4.8□□□□□ -1.64
TMEM39A-206ENST00000473684 OR56A3Q8NH54 315 aa4.8□□□□□ -1.64
TMEM39A-206ENST00000473684 XAGE5Q8WWM1 108 aa4.8□□□□□ -1.64
TMEM39A-206ENST00000473684 CENPIQ92674 756 aaPredicted RBP4.8□□□□□ -1.64
TMEM39A-206ENST00000473684 C1GALT1C1Q96EU7 318 aa4.8□□□□□ -1.64
TMEM39A-206ENST00000473684 MED8Q96G25 268 aa4.8□□□□□ -1.64
TMEM39A-206ENST00000473684 ITCHQ96J02 903 aa4.8□□□□□ -1.64
TMEM39A-206ENST00000473684 LCORQ96JN0 433 aaPredicted RBP4.8□□□□□ -1.64
TMEM39A-206ENST00000473684 FAM84BQ96KN1 310 aaPredicted RBP4.8□□□□□ -1.64
TMEM39A-206ENST00000473684 C7orf50Q9BRJ6 194 aaKnown RBP4.8□□□□□ -1.64
TMEM39A-206ENST00000473684 MESP1Q9BRJ9 268 aa4.8□□□□□ -1.64
TMEM39A-206ENST00000473684 GABARAPL3Q9BY60 117 aa4.8□□□□□ -1.64
TMEM39A-206ENST00000473684 POLDIP3Q9BY77 421 aaKnown RBP4.8□□□□□ -1.64
TMEM39A-206ENST00000473684 POMKQ9H5K3 350 aa4.8□□□□□ -1.64
TMEM39A-206ENST00000473684 CDCP1Q9H5V8 836 aa4.8□□□□□ -1.64
TMEM39A-206ENST00000473684 PTPRHQ9HD43 1115 aa4.8□□□□□ -1.64
TMEM39A-206ENST00000473684 B3GAT2Q9NPZ5 323 aa4.8□□□□□ -1.64
TMEM39A-206ENST00000473684 SMCO4Q9NRQ5 59 aa4.8□□□□□ -1.64
TMEM39A-206ENST00000473684 ZNF490Q9ULM2 529 aaPredicted RBP4.8□□□□□ -1.64
TMEM39A-206ENST00000473684 TMEM72A0PK05 275 aa4.8□□□□□ -1.64
TMEM39A-206ENST00000473684 M0QYT0 321 aa4.8□□□□□ -1.64
TMEM39A-206ENST00000473684 RRP8O43159 456 aaKnown RBP4.8□□□□□ -1.64
TMEM39A-206ENST00000473684 DLEU1O43261 78 aa4.8□□□□□ -1.64
TMEM39A-206ENST00000473684 PRAF2O60831 178 aa4.8□□□□□ -1.64
TMEM39A-206ENST00000473684 IL18BPO95998 194 aa4.8□□□□□ -1.64
TMEM39A-206ENST00000473684 OPN1MWP04001 364 aa4.8□□□□□ -1.64
TMEM39A-206ENST00000473684 ALDOBP05062 364 aa4.8□□□□□ -1.64
TMEM39A-206ENST00000473684 OPN1MW2P0DN77 364 aa4.8□□□□□ -1.64
TMEM39A-206ENST00000473684 OPN1MW3P0DN78 364 aa4.8□□□□□ -1.64
TMEM39A-206ENST00000473684 FPR1P21462 350 aa4.8□□□□□ -1.64
TMEM39A-206ENST00000473684 BMI1P35226 326 aa4.8□□□□□ -1.64
TMEM39A-206ENST00000473684 CRKLP46109 303 aaKnown RBP4.8□□□□□ -1.64
TMEM39A-206ENST00000473684 EVX1P49640 407 aa4.8□□□□□ -1.64
TMEM39A-206ENST00000473684 DIO1P49895 249 aa4.8□□□□□ -1.64
TMEM39A-206ENST00000473684 DAPP51397 102 aa4.8□□□□□ -1.64
TMEM39A-206ENST00000473684 IL13RA1P78552 427 aa4.8□□□□□ -1.64
TMEM39A-206ENST00000473684 ST3GAL4Q11206 333 aa4.8□□□□□ -1.64
TMEM39A-206ENST00000473684 HNRNPA0Q13151 305 aaKnown RBP4.8□□□□□ -1.64
TMEM39A-206ENST00000473684 FAM83EQ2M2I3 478 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms