RNA–Protein interactions for RNA: ENST00000473345.5

MCF2L-223, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 399 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-223ENST00000473345 FAPQ12884 760 aa8.57□□□□□ -1.04
MCF2L-223ENST00000473345 EFR3AQ14156 821 aa8.57□□□□□ -1.04
MCF2L-223ENST00000473345 CASP8Q14790 479 aa8.57□□□□□ -1.04
MCF2L-223ENST00000473345 FAM83EQ2M2I3 478 aa8.57□□□□□ -1.04
MCF2L-223ENST00000473345 SH2D4BQ5SQS7 431 aa8.57□□□□□ -1.04
MCF2L-223ENST00000473345 NCMAPQ5T1S8 102 aa8.57□□□□□ -1.04
MCF2L-223ENST00000473345 TTC19Q6DKK2 380 aaPredicted RBP8.57□□□□□ -1.04
MCF2L-223ENST00000473345 ADAM5Q6NVV9 412 aa8.57□□□□□ -1.04
MCF2L-223ENST00000473345 SCIMPQ6UWF3 145 aa8.57□□□□□ -1.04
MCF2L-223ENST00000473345 TRMT10CQ7L0Y3 403 aaKnown RBP8.57□□□□□ -1.04
MCF2L-223ENST00000473345 HDXQ7Z353 690 aa8.57□□□□□ -1.04
MCF2L-223ENST00000473345 MILR1Q7Z6M3 343 aa8.57□□□□□ -1.04
MCF2L-223ENST00000473345 CCDC25Q86WR0 208 aa8.57□□□□□ -1.04
MCF2L-223ENST00000473345 GABRG1Q8N1C3 465 aa8.57□□□□□ -1.04
MCF2L-223ENST00000473345 ARIH2OSQ8N7S6 290 aa8.57□□□□□ -1.04
MCF2L-223ENST00000473345 OR6K3Q8NGY3 331 aa8.57□□□□□ -1.04
MCF2L-223ENST00000473345 C16orf78Q8WTQ4 265 aa8.57□□□□□ -1.04
MCF2L-223ENST00000473345 SELENOMQ8WWX9 145 aa8.57□□□□□ -1.04
MCF2L-223ENST00000473345 SLC9A6Q92581 669 aa8.57□□□□□ -1.04
MCF2L-223ENST00000473345 ATP6V1E2Q96A05 226 aa8.57□□□□□ -1.04
MCF2L-223ENST00000473345 MTBPQ96DY7 904 aa8.57□□□□□ -1.04
MCF2L-223ENST00000473345 EBPLQ9BY08 206 aa8.57□□□□□ -1.04
MCF2L-223ENST00000473345 VPS11Q9H270 941 aa8.57□□□□□ -1.04
MCF2L-223ENST00000473345 CXorf56Q9H5V9 222 aa8.57□□□□□ -1.04
MCF2L-223ENST00000473345 C12orf49Q9H741 205 aa8.57□□□□□ -1.04
MCF2L-223ENST00000473345 TMEM185BQ9H7F4 350 aa8.57□□□□□ -1.04
MCF2L-223ENST00000473345 FBXO34Q9NWN3 711 aa8.57□□□□□ -1.04
MCF2L-223ENST00000473345 FAM53CQ9NYF3 392 aa8.57□□□□□ -1.04
MCF2L-223ENST00000473345 ING1Q9UK53 422 aaPredicted RBP8.57□□□□□ -1.04
MCF2L-223ENST00000473345 VDAC3Q9Y277 283 aa8.57□□□□□ -1.04
MCF2L-223ENST00000473345 ABCA1O95477 2261 aa8.57□□□□□ -1.04
MCF2L-223ENST00000473345 A8MT66 165 aa8.56□□□□□ -1.04
MCF2L-223ENST00000473345 STX16-NPEPL1H3BU86 382 aa8.56□□□□□ -1.04
MCF2L-223ENST00000473345 UPK1AO00322 258 aa8.56□□□□□ -1.04
MCF2L-223ENST00000473345 MANBAO00462 879 aa8.56□□□□□ -1.04
MCF2L-223ENST00000473345 EIF1AYO14602 144 aaKnown RBP8.56□□□□□ -1.04
MCF2L-223ENST00000473345 STX16O14662 325 aa8.56□□□□□ -1.04
MCF2L-223ENST00000473345 TNFSF11O14788 317 aa8.56□□□□□ -1.04
MCF2L-223ENST00000473345 CLOCKO15516 846 aa8.56□□□□□ -1.04
MCF2L-223ENST00000473345 OIP5O43482 229 aa8.56□□□□□ -1.04
MCF2L-223ENST00000473345 GSTA2P09210 222 aa8.56□□□□□ -1.04
MCF2L-223ENST00000473345 NUDT17P0C025 328 aa8.56□□□□□ -1.04
MCF2L-223ENST00000473345 PSMB1P20618 241 aaKnown RBP8.56□□□□□ -1.04
MCF2L-223ENST00000473345 AGTR1P30556 359 aa8.56□□□□□ -1.04
MCF2L-223ENST00000473345 HSD17B3P37058 310 aa8.56□□□□□ -1.04
MCF2L-223ENST00000473345 EIF1AXP47813 144 aaKnown RBP8.56□□□□□ -1.04
MCF2L-223ENST00000473345 ZNF155Q12901 538 aaPredicted RBP8.56□□□□□ -1.04
MCF2L-223ENST00000473345 IFT88Q13099 833 aa8.56□□□□□ -1.04
MCF2L-223ENST00000473345 TAB1Q15750 504 aa8.56□□□□□ -1.04
MCF2L-223ENST00000473345 GRAMD1BQ3KR37 738 aa8.56□□□□□ -1.04
MCF2L-223ENST00000473345 UNC50Q53HI1 259 aa8.56□□□□□ -1.04
MCF2L-223ENST00000473345 TMEM107Q6UX40 140 aa8.56□□□□□ -1.04
MCF2L-223ENST00000473345 CHMP1BQ7LBR1 199 aa8.56□□□□□ -1.04
MCF2L-223ENST00000473345 PAGE2Q7Z2X7 111 aa8.56□□□□□ -1.04
MCF2L-223ENST00000473345 EXOC3L1Q86VI1 746 aa8.56□□□□□ -1.04
MCF2L-223ENST00000473345 OR4C3Q8NH37 302 aa8.56□□□□□ -1.04
MCF2L-223ENST00000473345 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.56□□□□□ -1.04
MCF2L-223ENST00000473345 ROBO4Q8WZ75 1007 aa8.56□□□□□ -1.04
MCF2L-223ENST00000473345 PIK3R3Q92569 461 aa8.56□□□□□ -1.04
MCF2L-223ENST00000473345 ZBED6CLQ96FA7 236 aaPredicted RBP8.56□□□□□ -1.04
MCF2L-223ENST00000473345 GMPPAQ96IJ6 420 aaPredicted RBP8.56□□□□□ -1.04
MCF2L-223ENST00000473345 KCNA7Q96RP8 456 aa8.56□□□□□ -1.04
MCF2L-223ENST00000473345 SRXN1Q9BYN0 137 aa8.56□□□□□ -1.04
MCF2L-223ENST00000473345 TRIM2Q9C040 744 aa8.56□□□□□ -1.04
MCF2L-223ENST00000473345 CDC42EP4Q9H3Q1 356 aaKnown RBP8.56□□□□□ -1.04
MCF2L-223ENST00000473345 ELOVL6Q9H5J4 265 aa8.56□□□□□ -1.04
MCF2L-223ENST00000473345 SLC35C2Q9NQQ7 365 aa8.56□□□□□ -1.04
MCF2L-223ENST00000473345 AHSPQ9NZD4 102 aa8.56□□□□□ -1.04
MCF2L-223ENST00000473345 NPAP1Q9NZP6 1156 aa8.56□□□□□ -1.04
MCF2L-223ENST00000473345 TNPO3Q9Y5L0 923 aaKnown RBP8.56□□□□□ -1.04
MCF2L-223ENST00000473345 ZNF780BQ9Y6R6 833 aa8.56□□□□□ -1.04
MCF2L-223ENST00000473345 ANK2Q01484 3957 aa8.55□□□□□ -1.04
MCF2L-223ENST00000473345 SVEP1Q4LDE5 3571 aa8.55□□□□□ -1.04
MCF2L-223ENST00000473345 NBEAL1Q6ZS30 2694 aa8.55□□□□□ -1.04
MCF2L-223ENST00000473345 MYO1GB0I1T2 1018 aa8.55□□□□□ -1.04
MCF2L-223ENST00000473345 SHISA9B4DS77 424 aa8.55□□□□□ -1.04
MCF2L-223ENST00000473345 ZNF814B7Z6K7 855 aa8.55□□□□□ -1.04
MCF2L-223ENST00000473345 RIPK2O43353 540 aa8.55□□□□□ -1.04
MCF2L-223ENST00000473345 PCDH7O60245 1069 aa8.55□□□□□ -1.04
MCF2L-223ENST00000473345 UTS2O95399 124 aa8.55□□□□□ -1.04
MCF2L-223ENST00000473345 IL33O95760 270 aa8.55□□□□□ -1.04
MCF2L-223ENST00000473345 ANGPTL1O95841 491 aa8.55□□□□□ -1.04
MCF2L-223ENST00000473345 F12P00748 615 aaPredicted RBP8.55□□□□□ -1.04
MCF2L-223ENST00000473345 JUNP05412 331 aaKnown RBP8.55□□□□□ -1.04
MCF2L-223ENST00000473345 C8BP07358 591 aa8.55□□□□□ -1.04
MCF2L-223ENST00000473345 COL6A2P12110 1019 aa8.55□□□□□ -1.04
MCF2L-223ENST00000473345 TYK2P29597 1187 aa8.55□□□□□ -1.04
MCF2L-223ENST00000473345 MAP3K8P41279 467 aa8.55□□□□□ -1.04
MCF2L-223ENST00000473345 RNF144AP50876 292 aaPredicted RBP8.55□□□□□ -1.04
MCF2L-223ENST00000473345 FOXA1P55317 472 aa8.55□□□□□ -1.04
MCF2L-223ENST00000473345 TRA2BP62995 288 aaKnown RBP8.55□□□□□ -1.04
MCF2L-223ENST00000473345 IRX1P78414 480 aaPredicted RBP8.55□□□□□ -1.04
MCF2L-223ENST00000473345 BSPH1Q075Z2 132 aa8.55□□□□□ -1.04
MCF2L-223ENST00000473345 GANABQ14697 944 aaKnown RBP8.55□□□□□ -1.04
MCF2L-223ENST00000473345 PLPPR5Q32ZL2 321 aa8.55□□□□□ -1.04
MCF2L-223ENST00000473345 ZNF672Q499Z4 452 aaPredicted RBP8.55□□□□□ -1.04
MCF2L-223ENST00000473345 C6orf52Q5T4I8 152 aa8.55□□□□□ -1.04
MCF2L-223ENST00000473345 PPP4R4Q6NUP7 873 aa8.55□□□□□ -1.04
MCF2L-223ENST00000473345 METTL2BQ6P1Q9 378 aaKnown RBP8.55□□□□□ -1.04
MCF2L-223ENST00000473345 PODNL1Q6PEZ8 512 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms