RNA–Protein interactions for RNA: ENST00000471660.5

CHMP2B-203, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 2 BASIC

Gene CHMP2B, Length 2,528 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-203ENST00000471660 NEDD8-MDP1E9PL57 170 aa10.1□□□□□ -0.79
CHMP2B-203ENST00000471660 FAM72CH0Y354 149 aa10.1□□□□□ -0.79
CHMP2B-203ENST00000471660 H7C4K7 107 aa10.1□□□□□ -0.79
CHMP2B-203ENST00000471660 CLDN4O14493 209 aa10.1□□□□□ -0.79
CHMP2B-203ENST00000471660 SUV39H1O43463 412 aa10.1□□□□□ -0.79
CHMP2B-203ENST00000471660 RGS14O43566 566 aa10.1□□□□□ -0.79
CHMP2B-203ENST00000471660 B3GAT3O94766 335 aa10.1□□□□□ -0.79
CHMP2B-203ENST00000471660 RAB36O95755 333 aa10.1□□□□□ -0.79
CHMP2B-203ENST00000471660 HEXBP07686 556 aa10.1□□□□□ -0.79
CHMP2B-203ENST00000471660 RAB4AP20338 218 aa10.1□□□□□ -0.79
CHMP2B-203ENST00000471660 GALP22466 123 aa10.1□□□□□ -0.79
CHMP2B-203ENST00000471660 MPGP29372 298 aa10.1□□□□□ -0.79
CHMP2B-203ENST00000471660 LIMS1P48059 325 aa10.1□□□□□ -0.79
CHMP2B-203ENST00000471660 ZXDAP98168 799 aa10.1□□□□□ -0.79
CHMP2B-203ENST00000471660 SLC14A1Q13336 389 aa10.1□□□□□ -0.79
CHMP2B-203ENST00000471660 RAB33AQ14088 237 aa10.1□□□□□ -0.79
CHMP2B-203ENST00000471660 FAM72AQ5TYM5 149 aa10.1□□□□□ -0.79
CHMP2B-203ENST00000471660 AFMIDQ63HM1 303 aa10.1□□□□□ -0.79
CHMP2B-203ENST00000471660 FAM72DQ6L9T8 149 aa10.1□□□□□ -0.79
CHMP2B-203ENST00000471660 FAM72BQ86X60 149 aa10.1□□□□□ -0.79
CHMP2B-203ENST00000471660 GPR135Q8IZ08 494 aa10.1□□□□□ -0.79
CHMP2B-203ENST00000471660 ARRDC1Q8N5I2 433 aa10.1□□□□□ -0.79
CHMP2B-203ENST00000471660 VOPP1Q96AW1 172 aa10.1□□□□□ -0.79
CHMP2B-203ENST00000471660 ZNF354BQ96LW1 612 aa10.1□□□□□ -0.79
CHMP2B-203ENST00000471660 OCSTAMPQ9BR26 566 aa10.1□□□□□ -0.79
CHMP2B-203ENST00000471660 DOHHQ9BU89 302 aa10.1□□□□□ -0.79
CHMP2B-203ENST00000471660 ATP13A1Q9HD20 1204 aa10.1□□□□□ -0.79
CHMP2B-203ENST00000471660 ZDHHC4Q9NPG8 344 aa10.1□□□□□ -0.79
CHMP2B-203ENST00000471660 NTMQ9P121 344 aa10.1□□□□□ -0.79
CHMP2B-203ENST00000471660 DHCR7Q9UBM7 475 aaKnown RBP10.1□□□□□ -0.79
CHMP2B-203ENST00000471660 YARS2Q9Y2Z4 477 aaKnown RBP10.1□□□□□ -0.79
CHMP2B-203ENST00000471660 TRAPPC13A5PLN9 417 aa10.09□□□□□ -0.79
CHMP2B-203ENST00000471660 TMEM229AB2RXF0 380 aa10.09□□□□□ -0.79
CHMP2B-203ENST00000471660 TLR4O00206 839 aa10.09□□□□□ -0.79
CHMP2B-203ENST00000471660 PRRG1O14668 218 aa10.09□□□□□ -0.79
CHMP2B-203ENST00000471660 PEX11BO96011 259 aa10.09□□□□□ -0.79
CHMP2B-203ENST00000471660 ADCYAP1P18509 176 aa10.09□□□□□ -0.79
CHMP2B-203ENST00000471660 CD52P31358 61 aa10.09□□□□□ -0.79
CHMP2B-203ENST00000471660 PMELP40967 661 aa10.09□□□□□ -0.79
CHMP2B-203ENST00000471660 HMGA2P52926 109 aa10.09□□□□□ -0.79
CHMP2B-203ENST00000471660 MAT1AQ00266 395 aaKnown RBP10.09□□□□□ -0.79
CHMP2B-203ENST00000471660 ABRAXAS2Q15018 415 aa10.09□□□□□ -0.79
CHMP2B-203ENST00000471660 PPA1Q15181 289 aa10.09□□□□□ -0.79
CHMP2B-203ENST00000471660 DNLZQ5SXM8 178 aa10.09□□□□□ -0.79
CHMP2B-203ENST00000471660 PAQR6Q6TCH4 344 aa10.09□□□□□ -0.79
CHMP2B-203ENST00000471660 CD300LGQ6UXG3 332 aa10.09□□□□□ -0.79
CHMP2B-203ENST00000471660 TRIM46Q7Z4K8 759 aa10.09□□□□□ -0.79
CHMP2B-203ENST00000471660 GPR65Q8IYL9 337 aa10.09□□□□□ -0.79
CHMP2B-203ENST00000471660 KRTCAP2Q8N6L1 136 aa10.09□□□□□ -0.79
CHMP2B-203ENST00000471660 OR52B6Q8NGF0 335 aa10.09□□□□□ -0.79
CHMP2B-203ENST00000471660 OVCA2Q8WZ82 227 aa10.09□□□□□ -0.79
CHMP2B-203ENST00000471660 AARSD1Q9BTE6 412 aaKnown RBP10.09□□□□□ -0.79
CHMP2B-203ENST00000471660 FSD1LQ9BXM9 530 aa10.09□□□□□ -0.79
CHMP2B-203ENST00000471660 THSD1Q9NS62 852 aa10.09□□□□□ -0.79
CHMP2B-203ENST00000471660 MARCH4Q9P2E8 410 aaPredicted RBP10.09□□□□□ -0.79
CHMP2B-203ENST00000471660 OR12D3Q9UGF7 316 aa10.09□□□□□ -0.79
CHMP2B-203ENST00000471660 SLC9A8Q9Y2E8 581 aa10.09□□□□□ -0.79
CHMP2B-203ENST00000471660 PTPRSQ13332 1948 aa10.09□□□□□ -0.79
CHMP2B-203ENST00000471660 CLDN5O00501 218 aa10.09□□□□□ -0.79
CHMP2B-203ENST00000471660 TNFRSF10BO14763 440 aa10.09□□□□□ -0.79
CHMP2B-203ENST00000471660 BEST1O76090 585 aa10.09□□□□□ -0.79
CHMP2B-203ENST00000471660 ALPIP09923 528 aa10.09□□□□□ -0.79
CHMP2B-203ENST00000471660 NR2F6P10588 404 aa10.09□□□□□ -0.79
CHMP2B-203ENST00000471660 IFNGR1P15260 489 aa10.09□□□□□ -0.79
CHMP2B-203ENST00000471660 RPA2P15927 270 aa10.09□□□□□ -0.79
CHMP2B-203ENST00000471660 TIMP2P16035 220 aa10.09□□□□□ -0.79
CHMP2B-203ENST00000471660 CBR1P16152 277 aa10.09□□□□□ -0.79
CHMP2B-203ENST00000471660 AGAP20933 346 aa10.09□□□□□ -0.79
CHMP2B-203ENST00000471660 S100A3P33764 101 aa10.09□□□□□ -0.79
CHMP2B-203ENST00000471660 CRYBA2P53672 197 aa10.09□□□□□ -0.79
CHMP2B-203ENST00000471660 TAP2Q03519 686 aa10.09□□□□□ -0.79
CHMP2B-203ENST00000471660 RING1Q06587 406 aa10.09□□□□□ -0.79
CHMP2B-203ENST00000471660 FABP9Q0Z7S8 132 aa10.09□□□□□ -0.79
CHMP2B-203ENST00000471660 ATP13A5Q4VNC0 1218 aa10.09□□□□□ -0.79
CHMP2B-203ENST00000471660 ATAT1Q5SQI0 421 aa10.09□□□□□ -0.79
CHMP2B-203ENST00000471660 SLC25A30Q5SVS4 291 aa10.09□□□□□ -0.79
CHMP2B-203ENST00000471660 Q6ZTK2 550 aa10.09□□□□□ -0.79
CHMP2B-203ENST00000471660 SIAH3Q8IW03 269 aa10.09□□□□□ -0.79
CHMP2B-203ENST00000471660 NAGSQ8N159 534 aa10.09□□□□□ -0.79
CHMP2B-203ENST00000471660 PNPLA2Q96AD5 504 aa10.09□□□□□ -0.79
CHMP2B-203ENST00000471660 GGACTQ9BVM4 153 aa10.09□□□□□ -0.79
CHMP2B-203ENST00000471660 TSSK6Q9BXA6 273 aa10.09□□□□□ -0.79
CHMP2B-203ENST00000471660 DUSP15Q9H1R2 295 aaPredicted RBP10.09□□□□□ -0.79
CHMP2B-203ENST00000471660 CHMP1AQ9HD42 196 aaPredicted RBP10.09□□□□□ -0.79
CHMP2B-203ENST00000471660 TESQ9UGI8 421 aaKnown RBP10.09□□□□□ -0.79
CHMP2B-203ENST00000471660 EIF2B4Q9UI10 523 aaKnown RBP10.09□□□□□ -0.79
CHMP2B-203ENST00000471660 RAI2Q9Y5P3 530 aa10.09□□□□□ -0.79
CHMP2B-203ENST00000471660 E9PI62 339 aa10.08□□□□□ -0.8
CHMP2B-203ENST00000471660 BLOC1S5-TXNDC5H3BN57 136 aa10.08□□□□□ -0.8
CHMP2B-203ENST00000471660 MATN3O15232 486 aa10.08□□□□□ -0.8
CHMP2B-203ENST00000471660 EIF4E2O60573 245 aaKnown RBP10.08□□□□□ -0.8
CHMP2B-203ENST00000471660 ZNF44P15621 663 aa10.08□□□□□ -0.8
CHMP2B-203ENST00000471660 SDHAP31040 664 aa10.08□□□□□ -0.8
CHMP2B-203ENST00000471660 SRP9P49458 86 aaKnown RBP10.08□□□□□ -0.8
CHMP2B-203ENST00000471660 MMP15P51511 669 aa10.08□□□□□ -0.8
CHMP2B-203ENST00000471660 CCR6P51684 374 aa10.08□□□□□ -0.8
CHMP2B-203ENST00000471660 RAB2AP61019 212 aa10.08□□□□□ -0.8
CHMP2B-203ENST00000471660 SHC2P98077 582 aa10.08□□□□□ -0.8
CHMP2B-203ENST00000471660 ILF3Q12906 894 aaKnown RBP eCLIP10.08□□□□□ -0.8
CHMP2B-203ENST00000471660 MRPL58Q14197 206 aaKnown RBP10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms