RNA–Protein interactions for RNA: ENST00000470339.1

COL4A5-203, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 782 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-203ENST00000470339 H0YJX3 145 aa13.96□□□□□ -0.17
COL4A5-203ENST00000470339 hCG_2039718K7EN88 272 aa13.96□□□□□ -0.17
COL4A5-203ENST00000470339 ADAMDEC1O15204 470 aa13.96□□□□□ -0.17
COL4A5-203ENST00000470339 TSPAN2O60636 221 aa13.96□□□□□ -0.17
COL4A5-203ENST00000470339 EPPINO95925 133 aa13.96□□□□□ -0.17
COL4A5-203ENST00000470339 HPP00738 406 aa13.96□□□□□ -0.17
COL4A5-203ENST00000470339 NGFRP08138 427 aa13.96□□□□□ -0.17
COL4A5-203ENST00000470339 PEX2P28328 305 aa13.96□□□□□ -0.17
COL4A5-203ENST00000470339 KRT20P35900 424 aa13.96□□□□□ -0.17
COL4A5-203ENST00000470339 ADH7P40394 386 aa13.96□□□□□ -0.17
COL4A5-203ENST00000470339 OR1E2P47887 323 aa13.96□□□□□ -0.17
COL4A5-203ENST00000470339 NR0B1P51843 470 aaKnown RBP13.96□□□□□ -0.17
COL4A5-203ENST00000470339 NNATQ16517 81 aa13.96□□□□□ -0.17
COL4A5-203ENST00000470339 MAPK14Q16539 360 aa13.96□□□□□ -0.17
COL4A5-203ENST00000470339 FAM69BQ5VUD6 431 aa13.96□□□□□ -0.17
COL4A5-203ENST00000470339 LPCAT4Q643R3 524 aa13.96□□□□□ -0.17
COL4A5-203ENST00000470339 ZAR1Q86SH2 424 aa13.96□□□□□ -0.17
COL4A5-203ENST00000470339 CYP4Z1Q86W10 505 aa13.96□□□□□ -0.17
COL4A5-203ENST00000470339 GRAMD2AQ8IUY3 354 aa13.96□□□□□ -0.17
COL4A5-203ENST00000470339 TAGAPQ8N103 731 aa13.96□□□□□ -0.17
COL4A5-203ENST00000470339 SLC15A4Q8N697 577 aa13.96□□□□□ -0.17
COL4A5-203ENST00000470339 PACRGLQ8N7B6 248 aa13.96□□□□□ -0.17
COL4A5-203ENST00000470339 ZNF527Q8NB42 609 aa13.96□□□□□ -0.17
COL4A5-203ENST00000470339 TMBIM1Q969X1 311 aa13.96□□□□□ -0.17
COL4A5-203ENST00000470339 PIP5K1AQ99755 562 aa13.96□□□□□ -0.17
COL4A5-203ENST00000470339 VCXQ9H320 206 aa13.96□□□□□ -0.17
COL4A5-203ENST00000470339 UBQLN4Q9NRR5 601 aa13.96□□□□□ -0.17
COL4A5-203ENST00000470339 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.96□□□□□ -0.17
COL4A5-203ENST00000470339 KCNE5Q9UJ90 142 aa13.96□□□□□ -0.17
COL4A5-203ENST00000470339 CHST2Q9Y4C5 530 aa13.96□□□□□ -0.17
COL4A5-203ENST00000470339 LOC101059948A0A1B0GTJ6 334 aa13.95□□□□□ -0.18
COL4A5-203ENST00000470339 CDHR4A6H8M9 788 aa13.95□□□□□ -0.18
COL4A5-203ENST00000470339 OR6C70A6NIJ9 312 aa13.95□□□□□ -0.18
COL4A5-203ENST00000470339 PEX12O00623 359 aa13.95□□□□□ -0.18
COL4A5-203ENST00000470339 ABCB7O75027 752 aa13.95□□□□□ -0.18
COL4A5-203ENST00000470339 TNFRSF1BP20333 461 aa13.95□□□□□ -0.18
COL4A5-203ENST00000470339 ENDOUP21128 410 aaKnown RBP13.95□□□□□ -0.18
COL4A5-203ENST00000470339 TBXA2RP21731 343 aa13.95□□□□□ -0.18
COL4A5-203ENST00000470339 ABCD3P28288 659 aa13.95□□□□□ -0.18
COL4A5-203ENST00000470339 DNAJA1P31689 397 aaKnown RBP13.95□□□□□ -0.18
COL4A5-203ENST00000470339 DCTP40126 519 aa13.95□□□□□ -0.18
COL4A5-203ENST00000470339 HMGA2P52926 109 aa13.95□□□□□ -0.18
COL4A5-203ENST00000470339 SMIM11AP58511 58 aa13.95□□□□□ -0.18
COL4A5-203ENST00000470339 CAMK2BQ13554 666 aa13.95□□□□□ -0.18
COL4A5-203ENST00000470339 BTBD16Q32M84 506 aa13.95□□□□□ -0.18
COL4A5-203ENST00000470339 GRAMD1BQ3KR37 738 aa13.95□□□□□ -0.18
COL4A5-203ENST00000470339 KLHL26Q53HC5 615 aa13.95□□□□□ -0.18
COL4A5-203ENST00000470339 PPP4R4Q6NUP7 873 aa13.95□□□□□ -0.18
COL4A5-203ENST00000470339 TCTN3Q6NUS6 607 aa13.95□□□□□ -0.18
COL4A5-203ENST00000470339 ZNF836Q6ZNA1 936 aa13.95□□□□□ -0.18
COL4A5-203ENST00000470339 ZBTB49Q6ZSB9 765 aa13.95□□□□□ -0.18
COL4A5-203ENST00000470339 MARCH9Q86YJ5 346 aa13.95□□□□□ -0.18
COL4A5-203ENST00000470339 RAB43Q86YS6 212 aa13.95□□□□□ -0.18
COL4A5-203ENST00000470339 HIPK1Q86Z02 1210 aa13.95□□□□□ -0.18
COL4A5-203ENST00000470339 KBTBD2Q8IY47 623 aa13.95□□□□□ -0.18
COL4A5-203ENST00000470339 ARMC10Q8N2F6 343 aa13.95□□□□□ -0.18
COL4A5-203ENST00000470339 ICA1LQ8NDH6 482 aa13.95□□□□□ -0.18
COL4A5-203ENST00000470339 OR5K1Q8NHB7 308 aa13.95□□□□□ -0.18
COL4A5-203ENST00000470339 EPYCQ99645 322 aa13.95□□□□□ -0.18
COL4A5-203ENST00000470339 DEFB126Q9BYW3 111 aa13.95□□□□□ -0.18
COL4A5-203ENST00000470339 POLR2J2Q9GZM3 115 aaKnown RBP13.95□□□□□ -0.18
COL4A5-203ENST00000470339 POLR2J3Q9H1A7 115 aaKnown RBP13.95□□□□□ -0.18
COL4A5-203ENST00000470339 REEP1Q9H902 201 aa13.95□□□□□ -0.18
COL4A5-203ENST00000470339 MYOTQ9UBF9 498 aa13.95□□□□□ -0.18
COL4A5-203ENST00000470339 ACAD8Q9UKU7 415 aa13.95□□□□□ -0.18
COL4A5-203ENST00000470339 DTNAQ9Y4J8 743 aa13.95□□□□□ -0.18
COL4A5-203ENST00000470339 TMEM200CA6NKL6 621 aa13.94□□□□□ -0.18
COL4A5-203ENST00000470339 G3V2T6 193 aa13.94□□□□□ -0.18
COL4A5-203ENST00000470339 HS6ST1O60243 411 aa13.94□□□□□ -0.18
COL4A5-203ENST00000470339 PRKNO60260 465 aaPredicted RBP13.94□□□□□ -0.18
COL4A5-203ENST00000470339 REM1O75628 298 aa13.94□□□□□ -0.18
COL4A5-203ENST00000470339 LIPCP11150 499 aa13.94□□□□□ -0.18
COL4A5-203ENST00000470339 ZNF26P17031 533 aaPredicted RBP13.94□□□□□ -0.18
COL4A5-203ENST00000470339 F8A1P23610 371 aa13.94□□□□□ -0.18
COL4A5-203ENST00000470339 IL12BP29460 328 aa13.94□□□□□ -0.18
COL4A5-203ENST00000470339 OTX2P32243 289 aa13.94□□□□□ -0.18
COL4A5-203ENST00000470339 RFX3P48380 749 aa13.94□□□□□ -0.18
COL4A5-203ENST00000470339 ARHGDIAP52565 204 aa13.94□□□□□ -0.18
COL4A5-203ENST00000470339 RPS18P62269 152 aaKnown RBP13.94□□□□□ -0.18
COL4A5-203ENST00000470339 PLCXD2Q0VAA5 305 aa13.94□□□□□ -0.18
COL4A5-203ENST00000470339 EFR3AQ14156 821 aa13.94□□□□□ -0.18
COL4A5-203ENST00000470339 FGFBP1Q14512 234 aa13.94□□□□□ -0.18
COL4A5-203ENST00000470339 PDZK1Q5T2W1 519 aa13.94□□□□□ -0.18
COL4A5-203ENST00000470339 SHQ1Q6PI26 577 aaKnown RBP13.94□□□□□ -0.18
COL4A5-203ENST00000470339 ZNF605Q86T29 641 aa13.94□□□□□ -0.18
COL4A5-203ENST00000470339 COMTD1Q86VU5 262 aa13.94□□□□□ -0.18
COL4A5-203ENST00000470339 ZDHHC13Q8IUH4 622 aa13.94□□□□□ -0.18
COL4A5-203ENST00000470339 CLIP4Q8N3C7 705 aa13.94□□□□□ -0.18
COL4A5-203ENST00000470339 IL22RA1Q8N6P7 574 aa13.94□□□□□ -0.18
COL4A5-203ENST00000470339 OR4D11Q8NGI4 311 aa13.94□□□□□ -0.18
COL4A5-203ENST00000470339 OR4C3Q8NH37 302 aa13.94□□□□□ -0.18
COL4A5-203ENST00000470339 KIAA1143Q96AT1 154 aaPredicted RBP13.94□□□□□ -0.18
COL4A5-203ENST00000470339 OMA1Q96E52 524 aa13.94□□□□□ -0.18
COL4A5-203ENST00000470339 CIB1Q99828 191 aa13.94□□□□□ -0.18
COL4A5-203ENST00000470339 COQ10BQ9H8M1 238 aa13.94□□□□□ -0.18
COL4A5-203ENST00000470339 PRDM4Q9UKN5 801 aa13.94□□□□□ -0.18
COL4A5-203ENST00000470339 OAZ3Q9UMX2 235 aa13.94□□□□□ -0.18
COL4A5-203ENST00000470339 SLC35A3Q9Y2D2 325 aa13.94□□□□□ -0.18
COL4A5-203ENST00000470339 NPFFR2Q9Y5X5 522 aa13.94□□□□□ -0.18
COL4A5-203ENST00000470339 DCHS1Q96JQ0 3298 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms