RNA–Protein interactions for RNA: ENST00000470278.5

CDC42SE1-203, Transcript of CDC42 small effector 1, humanhuman

TSL 5

Gene CDC42SE1, Length 939 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-203ENST00000470278 PTGDSP41222 190 aa13.67□□□□□ -0.22
CDC42SE1-203ENST00000470278 CRATP43155 626 aa13.67□□□□□ -0.22
CDC42SE1-203ENST00000470278 CASP9P55211 416 aa13.67□□□□□ -0.22
CDC42SE1-203ENST00000470278 GPR85P60893 370 aa13.67□□□□□ -0.22
CDC42SE1-203ENST00000470278 DSTNP60981 165 aa13.67□□□□□ -0.22
CDC42SE1-203ENST00000470278 KCNJ2P63252 427 aa13.67□□□□□ -0.22
CDC42SE1-203ENST00000470278 CCNJQ5T5M9 372 aa13.67□□□□□ -0.22
CDC42SE1-203ENST00000470278 FAM180AQ6UWF9 173 aa13.67□□□□□ -0.22
CDC42SE1-203ENST00000470278 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.67□□□□□ -0.22
CDC42SE1-203ENST00000470278 OR8J3Q8NGG0 315 aa13.67□□□□□ -0.22
CDC42SE1-203ENST00000470278 GRHL3Q8TE85 626 aa13.67□□□□□ -0.22
CDC42SE1-203ENST00000470278 RAB8BQ92930 207 aa13.67□□□□□ -0.22
CDC42SE1-203ENST00000470278 ROPN1LQ96C74 230 aa13.67□□□□□ -0.22
CDC42SE1-203ENST00000470278 LRRC58Q96CX6 371 aa13.67□□□□□ -0.22
CDC42SE1-203ENST00000470278 SNRNP40Q96DI7 357 aaKnown RBP13.67□□□□□ -0.22
CDC42SE1-203ENST00000470278 ZNF597Q96LX8 424 aa13.67□□□□□ -0.22
CDC42SE1-203ENST00000470278 TRNT1Q96Q11 434 aaKnown RBP13.67□□□□□ -0.22
CDC42SE1-203ENST00000470278 SAP130Q9H0E3 1048 aa13.67□□□□□ -0.22
CDC42SE1-203ENST00000470278 IKZF5Q9H5V7 419 aa13.67□□□□□ -0.22
CDC42SE1-203ENST00000470278 IL1RL2Q9HB29 575 aa13.67□□□□□ -0.22
CDC42SE1-203ENST00000470278 HHATLQ9HCP6 504 aa13.67□□□□□ -0.22
CDC42SE1-203ENST00000470278 UBQLN4Q9NRR5 601 aa13.67□□□□□ -0.22
CDC42SE1-203ENST00000470278 KLRF1Q9NZS2 232 aa13.67□□□□□ -0.22
CDC42SE1-203ENST00000470278 P2RX2Q9UBL9 471 aa13.67□□□□□ -0.22
CDC42SE1-203ENST00000470278 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.67□□□□□ -0.22
CDC42SE1-203ENST00000470278 BOKQ9UMX3 212 aaPredicted RBP13.67□□□□□ -0.22
CDC42SE1-203ENST00000470278 WIF1Q9Y5W5 379 aa13.67□□□□□ -0.22
CDC42SE1-203ENST00000470278 POLEQ07864 2286 aa13.66□□□□□ -0.22
CDC42SE1-203ENST00000470278 TEP1Q99973 2627 aaKnown RBP13.66□□□□□ -0.22
CDC42SE1-203ENST00000470278 A0A1W2PQD3 144 aa13.66□□□□□ -0.22
CDC42SE1-203ENST00000470278 PRAMEF27A3QJZ7 478 aa13.66□□□□□ -0.22
CDC42SE1-203ENST00000470278 PINLYPA6NC86 204 aa13.66□□□□□ -0.22
CDC42SE1-203ENST00000470278 LRRC3CA6NJW4 275 aa13.66□□□□□ -0.22
CDC42SE1-203ENST00000470278 TTLL8A6PVC2 850 aa13.66□□□□□ -0.22
CDC42SE1-203ENST00000470278 EVPLLA8MZ36 301 aa13.66□□□□□ -0.22
CDC42SE1-203ENST00000470278 ALG1L2C9J202 215 aa13.66□□□□□ -0.22
CDC42SE1-203ENST00000470278 TNFRSF21O75509 655 aa13.66□□□□□ -0.22
CDC42SE1-203ENST00000470278 GLSO94925 669 aaPredicted RBP13.66□□□□□ -0.22
CDC42SE1-203ENST00000470278 ETFAP13804 333 aa13.66□□□□□ -0.22
CDC42SE1-203ENST00000470278 ZNF24P17028 368 aa13.66□□□□□ -0.22
CDC42SE1-203ENST00000470278 TBXA2RP21731 343 aa13.66□□□□□ -0.22
CDC42SE1-203ENST00000470278 ELAVL4P26378 380 aaKnown RBP13.66□□□□□ -0.22
CDC42SE1-203ENST00000470278 RFX3P48380 749 aa13.66□□□□□ -0.22
CDC42SE1-203ENST00000470278 DNASE1L1P49184 302 aa13.66□□□□□ -0.22
CDC42SE1-203ENST00000470278 GAS1P54826 345 aa13.66□□□□□ -0.22
CDC42SE1-203ENST00000470278 HPCAP84074 193 aa13.66□□□□□ -0.22
CDC42SE1-203ENST00000470278 INPP5JQ15735 1006 aaPredicted RBP13.66□□□□□ -0.22
CDC42SE1-203ENST00000470278 GRAMD1BQ3KR37 738 aa13.66□□□□□ -0.22
CDC42SE1-203ENST00000470278 BICRALQ6AI39 1079 aa13.66□□□□□ -0.22
CDC42SE1-203ENST00000470278 ZNF324BQ6AW86 544 aaPredicted RBP13.66□□□□□ -0.22
CDC42SE1-203ENST00000470278 HACD2Q6Y1H2 254 aa13.66□□□□□ -0.22
CDC42SE1-203ENST00000470278 ZAR1Q86SH2 424 aa13.66□□□□□ -0.22
CDC42SE1-203ENST00000470278 PACS2Q86VP3 889 aa13.66□□□□□ -0.22
CDC42SE1-203ENST00000470278 POU5F2Q8N7G0 328 aa13.66□□□□□ -0.22
CDC42SE1-203ENST00000470278 XAGE5Q8WWM1 108 aa13.66□□□□□ -0.22
CDC42SE1-203ENST00000470278 PMM1Q92871 262 aa13.66□□□□□ -0.22
CDC42SE1-203ENST00000470278 RCN3Q96D15 328 aa13.66□□□□□ -0.22
CDC42SE1-203ENST00000470278 TTTY12Q9BZ98 90 aa13.66□□□□□ -0.22
CDC42SE1-203ENST00000470278 HOXD1Q9GZZ0 328 aa13.66□□□□□ -0.22
CDC42SE1-203ENST00000470278 ZFP64Q9NPA5 681 aa13.66□□□□□ -0.22
CDC42SE1-203ENST00000470278 A4GALTQ9NPC4 353 aa13.66□□□□□ -0.22
CDC42SE1-203ENST00000470278 AGPAT4Q9NRZ5 378 aa13.66□□□□□ -0.22
CDC42SE1-203ENST00000470278 FBXO34Q9NWN3 711 aa13.66□□□□□ -0.22
CDC42SE1-203ENST00000470278 GID8Q9NWU2 228 aa13.66□□□□□ -0.22
CDC42SE1-203ENST00000470278 FLRT3Q9NZU0 649 aa13.66□□□□□ -0.22
CDC42SE1-203ENST00000470278 NTNG1Q9Y2I2 539 aa13.66□□□□□ -0.22
CDC42SE1-203ENST00000470278 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.66□□□□□ -0.22
CDC42SE1-203ENST00000470278 CREBBPQ92793 2442 aa13.66□□□□□ -0.22
CDC42SE1-203ENST00000470278 DSPPQ9NZW4 1301 aa13.65□□□□□ -0.22
CDC42SE1-203ENST00000470278 C15orf38-AP3S2A0A0A6YYH1 394 aa13.65□□□□□ -0.22
CDC42SE1-203ENST00000470278 G3V3Y1 287 aa13.65□□□□□ -0.22
CDC42SE1-203ENST00000470278 SNPHO15079 494 aa13.65□□□□□ -0.22
CDC42SE1-203ENST00000470278 OXSR1O95747 527 aaPredicted RBP13.65□□□□□ -0.22
CDC42SE1-203ENST00000470278 TFPTP0C1Z6 253 aa13.65□□□□□ -0.22
CDC42SE1-203ENST00000470278 DCTP40126 519 aa13.65□□□□□ -0.22
CDC42SE1-203ENST00000470278 CLK3P49761 638 aaKnown RBP13.65□□□□□ -0.22
CDC42SE1-203ENST00000470278 PMP22Q01453 160 aa13.65□□□□□ -0.22
CDC42SE1-203ENST00000470278 GNA13Q14344 377 aa13.65□□□□□ -0.22
CDC42SE1-203ENST00000470278 KRT72Q14CN4 511 aa13.65□□□□□ -0.22
CDC42SE1-203ENST00000470278 FLYWCH1Q4VC44 716 aa13.65□□□□□ -0.22
CDC42SE1-203ENST00000470278 PRR30Q53SZ7 412 aaPredicted RBP13.65□□□□□ -0.22
CDC42SE1-203ENST00000470278 FNDC7Q5VTL7 733 aa13.65□□□□□ -0.22
CDC42SE1-203ENST00000470278 PRAMEF8Q5VWM4 474 aa13.65□□□□□ -0.22
CDC42SE1-203ENST00000470278 PRAMEF7Q5VXH5 474 aa13.65□□□□□ -0.22
CDC42SE1-203ENST00000470278 TYW3Q6IPR3 259 aaKnown RBP13.65□□□□□ -0.22
CDC42SE1-203ENST00000470278 BNC2Q6ZN30 1099 aaPredicted RBP13.65□□□□□ -0.22
CDC42SE1-203ENST00000470278 FRRS1Q6ZNA5 592 aa13.65□□□□□ -0.22
CDC42SE1-203ENST00000470278 LRRC74BQ6ZQY2 392 aa13.65□□□□□ -0.22
CDC42SE1-203ENST00000470278 ARPINQ7Z6K5 226 aa13.65□□□□□ -0.22
CDC42SE1-203ENST00000470278 MISPQ8IVT2 679 aa13.65□□□□□ -0.22
CDC42SE1-203ENST00000470278 CISD2Q8N5K1 135 aaKnown RBP13.65□□□□□ -0.22
CDC42SE1-203ENST00000470278 FITM2Q8N6M3 262 aa13.65□□□□□ -0.22
CDC42SE1-203ENST00000470278 METTL25Q8N6Q8 603 aa13.65□□□□□ -0.22
CDC42SE1-203ENST00000470278 ZNF527Q8NB42 609 aa13.65□□□□□ -0.22
CDC42SE1-203ENST00000470278 OR4C3Q8NH37 302 aa13.65□□□□□ -0.22
CDC42SE1-203ENST00000470278 CPT1CQ8TCG5 803 aa13.65□□□□□ -0.22
CDC42SE1-203ENST00000470278 FAR1Q8WVX9 515 aa13.65□□□□□ -0.22
CDC42SE1-203ENST00000470278 NR4A3Q92570 626 aa13.65□□□□□ -0.22
CDC42SE1-203ENST00000470278 SH3GL1Q99961 368 aa13.65□□□□□ -0.22
CDC42SE1-203ENST00000470278 SLX1AQ9BQ83 275 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms