RNA–Protein interactions for RNA: ENST00000469739.6

TOP3A-203, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 3,196 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-203ENST00000469739 LHFPL3Q86UP9 236 aa8.81□□□□□ -1
TOP3A-203ENST00000469739 C7orf57Q8NEG2 295 aa8.81□□□□□ -1
TOP3A-203ENST00000469739 APOBEC4Q8WW27 367 aaKnown RBP8.81□□□□□ -1
TOP3A-203ENST00000469739 RSC1A1Q92681 617 aa8.81□□□□□ -1
TOP3A-203ENST00000469739 TSSK6Q9BXA6 273 aa8.81□□□□□ -1
TOP3A-203ENST00000469739 EVA1BQ9NVM1 165 aa8.81□□□□□ -1
TOP3A-203ENST00000469739 C14orf119Q9NWQ9 140 aa8.81□□□□□ -1
TOP3A-203ENST00000469739 OBP2AQ9NY56 170 aa8.81□□□□□ -1
TOP3A-203ENST00000469739 MED12Q93074 2177 aa8.81□□□□□ -1
TOP3A-203ENST00000469739 NCOR1O75376 2440 aa8.81□□□□□ -1
TOP3A-203ENST00000469739 ZC3H12DA2A288 527 aaKnown RBP8.81□□□□□ -1
TOP3A-203ENST00000469739 FAM170BA6NMN3 283 aa8.81□□□□□ -1
TOP3A-203ENST00000469739 PEX12O00623 359 aa8.81□□□□□ -1
TOP3A-203ENST00000469739 PRICKLE3O43900 615 aaPredicted RBP8.81□□□□□ -1
TOP3A-203ENST00000469739 CCNYL3P0C7X3 344 aa8.81□□□□□ -1
TOP3A-203ENST00000469739 DRD2P14416 443 aa8.81□□□□□ -1
TOP3A-203ENST00000469739 S100A5P33763 92 aa8.81□□□□□ -1
TOP3A-203ENST00000469739 CD79BP40259 229 aa8.81□□□□□ -1
TOP3A-203ENST00000469739 LIMS1P48059 325 aa8.81□□□□□ -1
TOP3A-203ENST00000469739 CAV3P56539 151 aa8.81□□□□□ -1
TOP3A-203ENST00000469739 PRR5P85299 388 aa8.81□□□□□ -1
TOP3A-203ENST00000469739 MAT1AQ00266 395 aaKnown RBP8.81□□□□□ -1
TOP3A-203ENST00000469739 CSTF1Q05048 431 aaKnown RBP8.81□□□□□ -1
TOP3A-203ENST00000469739 DSG2Q14126 1118 aa8.81□□□□□ -1
TOP3A-203ENST00000469739 NFATC4Q14934 902 aa8.81□□□□□ -1
TOP3A-203ENST00000469739 HSDL2Q6YN16 418 aa8.81□□□□□ -1
TOP3A-203ENST00000469739 NRMQ8IXM6 262 aa8.81□□□□□ -1
TOP3A-203ENST00000469739 UBE2J2Q8N2K1 259 aa8.81□□□□□ -1
TOP3A-203ENST00000469739 POLR2J2Q9GZM3 115 aaKnown RBP8.81□□□□□ -1
TOP3A-203ENST00000469739 SLC38A1Q9H2H9 487 aa8.81□□□□□ -1
TOP3A-203ENST00000469739 SNTG1Q9NSN8 517 aa8.81□□□□□ -1
TOP3A-203ENST00000469739 MAN2C1Q9NTJ4 1040 aa8.81□□□□□ -1
TOP3A-203ENST00000469739 ACSS1Q9NUB1 689 aaPredicted RBP8.81□□□□□ -1
TOP3A-203ENST00000469739 SNX7Q9UNH6 387 aa8.81□□□□□ -1
TOP3A-203ENST00000469739 WBP11Q9Y2W2 641 aaKnown RBP8.81□□□□□ -1
TOP3A-203ENST00000469739 AGAP5A6NIR3 686 aa8.81□□□□□ -1
TOP3A-203ENST00000469739 H0YGG7 62 aa8.81□□□□□ -1
TOP3A-203ENST00000469739 MEN1O00255 615 aa8.81□□□□□ -1
TOP3A-203ENST00000469739 SDC3O75056 442 aa8.81□□□□□ -1
TOP3A-203ENST00000469739 ALPPP05187 535 aa8.81□□□□□ -1
TOP3A-203ENST00000469739 FHP07954 510 aa8.81□□□□□ -1
TOP3A-203ENST00000469739 GNSP15586 552 aa8.81□□□□□ -1
TOP3A-203ENST00000469739 ATP6V1E1P36543 226 aa8.81□□□□□ -1
TOP3A-203ENST00000469739 LTBRP36941 435 aa8.81□□□□□ -1
TOP3A-203ENST00000469739 TSPAN7P41732 249 aa8.81□□□□□ -1
TOP3A-203ENST00000469739 DEFA1P59665 94 aa8.81□□□□□ -1
TOP3A-203ENST00000469739 DEFA3P59666 94 aa8.81□□□□□ -1
TOP3A-203ENST00000469739 ARF3P61204 181 aaPredicted RBP8.81□□□□□ -1
TOP3A-203ENST00000469739 STXBP1P61764 594 aaKnown RBP8.81□□□□□ -1
TOP3A-203ENST00000469739 ZNF91Q05481 1191 aa8.81□□□□□ -1
TOP3A-203ENST00000469739 RGS1Q08116 209 aa8.81□□□□□ -1
TOP3A-203ENST00000469739 ILF3Q12906 894 aaKnown RBP eCLIP8.81□□□□□ -14e-6■■■□□ 17.2
TOP3A-203ENST00000469739 SQSTM1Q13501 440 aa8.81□□□□□ -1
TOP3A-203ENST00000469739 ZIC1Q15915 447 aa8.81□□□□□ -1
TOP3A-203ENST00000469739 DUSP5Q16690 384 aa8.81□□□□□ -1
TOP3A-203ENST00000469739 TYW3Q6IPR3 259 aaKnown RBP8.81□□□□□ -1
TOP3A-203ENST00000469739 PLEKHM3Q6ZWE6 761 aa8.81□□□□□ -1
TOP3A-203ENST00000469739 UBQLNLQ8IYU4 475 aa8.81□□□□□ -1
TOP3A-203ENST00000469739 GRHL3Q8TE85 626 aa8.81□□□□□ -1
TOP3A-203ENST00000469739 TMEM255BQ8WV15 326 aa8.81□□□□□ -1
TOP3A-203ENST00000469739 GATAD2BQ8WXI9 593 aa8.81□□□□□ -1
TOP3A-203ENST00000469739 ANAPC16Q96DE5 110 aa8.81□□□□□ -1
TOP3A-203ENST00000469739 TRMT61AQ96FX7 289 aaKnown RBP8.81□□□□□ -1
TOP3A-203ENST00000469739 ST6GAL2Q96JF0 529 aa8.81□□□□□ -1
TOP3A-203ENST00000469739 CCDC3Q9BQI4 270 aa8.81□□□□□ -1
TOP3A-203ENST00000469739 NARFLQ9H6Q4 476 aa8.81□□□□□ -1
TOP3A-203ENST00000469739 KIR3DX1Q9H7L2 352 aa8.81□□□□□ -1
TOP3A-203ENST00000469739 C3orf14Q9HBI5 128 aa8.81□□□□□ -1
TOP3A-203ENST00000469739 ANKHQ9HCJ1 492 aa8.81□□□□□ -1
TOP3A-203ENST00000469739 ACTR10Q9NZ32 417 aa8.81□□□□□ -1
TOP3A-203ENST00000469739 PCDHGB1Q9Y5G3 927 aa8.81□□□□□ -1
TOP3A-203ENST00000469739 CSNK1G3Q9Y6M4 447 aa8.81□□□□□ -1
TOP3A-203ENST00000469739 A0A0G2JMP0 313 aa8.8□□□□□ -1
TOP3A-203ENST00000469739 CTSEP14091 401 aa8.8□□□□□ -1
TOP3A-203ENST00000469739 PCSK2P16519 638 aa8.8□□□□□ -1
TOP3A-203ENST00000469739 GABRG2P18507 467 aa8.8□□□□□ -1
TOP3A-203ENST00000469739 HNRNPA2B1P22626 353 aaKnown RBP8.8□□□□□ -1
TOP3A-203ENST00000469739 ENPP2Q13822 863 aa8.8□□□□□ -1
TOP3A-203ENST00000469739 INSL4Q14641 139 aa8.8□□□□□ -1
TOP3A-203ENST00000469739 YIF1BQ5BJH7 314 aa8.8□□□□□ -1
TOP3A-203ENST00000469739 FAM205BPQ63HN1 556 aa8.8□□□□□ -1
TOP3A-203ENST00000469739 SLC22A18ASQ8N1D0 253 aa8.8□□□□□ -1
TOP3A-203ENST00000469739 TEX19Q8NA77 164 aa8.8□□□□□ -1
TOP3A-203ENST00000469739 DENND6BQ8NEG7 585 aa8.8□□□□□ -1
TOP3A-203ENST00000469739 NLGN4YQ8NFZ3 816 aaPredicted RBP8.8□□□□□ -1
TOP3A-203ENST00000469739 OR9Q1Q8NGQ5 310 aa8.8□□□□□ -1
TOP3A-203ENST00000469739 OR52P1PQ8NH57 321 aa8.8□□□□□ -1
TOP3A-203ENST00000469739 GPR151Q8TDV0 419 aa8.8□□□□□ -1
TOP3A-203ENST00000469739 SLC37A2Q8TED4 501 aa8.8□□□□□ -1
TOP3A-203ENST00000469739 TOE1Q96GM8 510 aaKnown RBP8.8□□□□□ -1
TOP3A-203ENST00000469739 SLC6A18Q96N87 628 aa8.8□□□□□ -1
TOP3A-203ENST00000469739 OR2A14Q96R47 310 aa8.8□□□□□ -1
TOP3A-203ENST00000469739 S1PR5Q9H228 398 aa8.8□□□□□ -1
TOP3A-203ENST00000469739 MED20Q9H944 212 aa8.8□□□□□ -1
TOP3A-203ENST00000469739 FAM60AQ9NP50 221 aa8.8□□□□□ -1
TOP3A-203ENST00000469739 POLMQ9NP87 494 aaPredicted RBP8.8□□□□□ -1
TOP3A-203ENST00000469739 ERVK13-1Q9NX77 482 aa8.8□□□□□ -1
TOP3A-203ENST00000469739 HCN3Q9P1Z3 774 aa8.8□□□□□ -1
TOP3A-203ENST00000469739 WDR45Q9Y484 360 aa8.8□□□□□ -1
TOP3A-203ENST00000469739 DSCR3O14972 297 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms