RNA–Protein interactions for RNA: ENST00000467319.1

MSH5-212, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-212ENST00000467319 ESPL1Q14674 2120 aa10.07□□□□□ -0.8
MSH5-212ENST00000467319 A0A1W2PQD3 144 aa10.07□□□□□ -0.8
MSH5-212ENST00000467319 SLC22A2O15244 555 aa10.07□□□□□ -0.8
MSH5-212ENST00000467319 SCO2O43819 266 aa10.07□□□□□ -0.8
MSH5-212ENST00000467319 SUSD5O60279 629 aa10.07□□□□□ -0.8
MSH5-212ENST00000467319 SNX3O60493 162 aa10.07□□□□□ -0.8
MSH5-212ENST00000467319 HCN1O60741 890 aa10.07□□□□□ -0.8
MSH5-212ENST00000467319 SLC19A2O60779 497 aa10.07□□□□□ -0.8
MSH5-212ENST00000467319 KRT75O95678 551 aa10.07□□□□□ -0.8
MSH5-212ENST00000467319 BMP2P12643 396 aa10.07□□□□□ -0.8
MSH5-212ENST00000467319 ADSLP30566 484 aaPredicted RBP10.07□□□□□ -0.8
MSH5-212ENST00000467319 RFX3P48380 749 aa10.07□□□□□ -0.8
MSH5-212ENST00000467319 UBAP2LQ14157 1087 aaKnown RBP10.07□□□□□ -0.8
MSH5-212ENST00000467319 MAPK11Q15759 364 aa10.07□□□□□ -0.8
MSH5-212ENST00000467319 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.07□□□□□ -0.8
MSH5-212ENST00000467319 ARHGAP11BQ3KRB8 267 aa10.07□□□□□ -0.8
MSH5-212ENST00000467319 ARHGAP11AQ6P4F7 1023 aa10.07□□□□□ -0.8
MSH5-212ENST00000467319 DLEU7Q6UYE1 221 aa10.07□□□□□ -0.8
MSH5-212ENST00000467319 TRILQ7L0X0 811 aa10.07□□□□□ -0.8
MSH5-212ENST00000467319 PLCZ1Q86YW0 608 aa10.07□□□□□ -0.8
MSH5-212ENST00000467319 OR1J4Q8NGS1 313 aa10.07□□□□□ -0.8
MSH5-212ENST00000467319 PNPT1Q8TCS8 783 aaKnown RBP10.07□□□□□ -0.8
MSH5-212ENST00000467319 OIT3Q8WWZ8 545 aa10.07□□□□□ -0.8
MSH5-212ENST00000467319 RAB8BQ92930 207 aa10.07□□□□□ -0.8
MSH5-212ENST00000467319 GNRHR2Q96P88 292 aa10.07□□□□□ -0.8
MSH5-212ENST00000467319 SAP130Q9H0E3 1048 aa10.07□□□□□ -0.8
MSH5-212ENST00000467319 TPT1P8Q9HAU6 139 aa10.07□□□□□ -0.8
MSH5-212ENST00000467319 POLE3Q9NRF9 147 aa10.07□□□□□ -0.8
MSH5-212ENST00000467319 UBQLN4Q9NRR5 601 aa10.07□□□□□ -0.8
MSH5-212ENST00000467319 EXD2Q9NVH0 621 aa10.07□□□□□ -0.8
MSH5-212ENST00000467319 SLAMF8Q9P0V8 285 aa10.07□□□□□ -0.8
MSH5-212ENST00000467319 SPRR3Q9UBC9 169 aa10.07□□□□□ -0.8
MSH5-212ENST00000467319 PCDHB14Q9Y5E9 798 aa10.07□□□□□ -0.8
MSH5-212ENST00000467319 ZGRF1Q86YA3 2104 aa10.07□□□□□ -0.8
MSH5-212ENST00000467319 DSPPQ9NZW4 1301 aa10.07□□□□□ -0.8
MSH5-212ENST00000467319 NINQ8N4C6 2090 aa10.06□□□□□ -0.8
MSH5-212ENST00000467319 USP9YO00507 2555 aaPredicted RBP10.06□□□□□ -0.8
MSH5-212ENST00000467319 CENPVL1A0A0U1RR11 272 aa10.06□□□□□ -0.8
MSH5-212ENST00000467319 C2orf72A6NCS6 295 aa10.06□□□□□ -0.8
MSH5-212ENST00000467319 OR14I1A6ND48 311 aa10.06□□□□□ -0.8
MSH5-212ENST00000467319 FXYD1O00168 92 aa10.06□□□□□ -0.8
MSH5-212ENST00000467319 AQP7O14520 342 aa10.06□□□□□ -0.8
MSH5-212ENST00000467319 GNB5O14775 395 aa10.06□□□□□ -0.8
MSH5-212ENST00000467319 OR12D1P0DN82 309 aa10.06□□□□□ -0.8
MSH5-212ENST00000467319 ATP6V1C1P21283 382 aa10.06□□□□□ -0.8
MSH5-212ENST00000467319 GDF1P27539 372 aa10.06□□□□□ -0.8
MSH5-212ENST00000467319 DCTP40126 519 aa10.06□□□□□ -0.8
MSH5-212ENST00000467319 ANXA11P50995 505 aaKnown RBP10.06□□□□□ -0.8
MSH5-212ENST00000467319 CASP9P55211 416 aa10.06□□□□□ -0.8
MSH5-212ENST00000467319 GNGT1P63211 74 aa10.06□□□□□ -0.8
MSH5-212ENST00000467319 SRSF1Q07955 248 aaKnown RBP eCLIP10.06□□□□□ -0.82e-6■■□□□ 13.9
MSH5-212ENST00000467319 SF3A3Q12874 501 aaKnown RBP eCLIP10.06□□□□□ -0.87e-7■■■□□ 18.1
MSH5-212ENST00000467319 KLF10Q13118 480 aa10.06□□□□□ -0.8
MSH5-212ENST00000467319 CD226Q15762 336 aa10.06□□□□□ -0.8
MSH5-212ENST00000467319 ZNF141Q15928 474 aa10.06□□□□□ -0.8
MSH5-212ENST00000467319 KLHL26Q53HC5 615 aa10.06□□□□□ -0.8
MSH5-212ENST00000467319 COQ5Q5HYK3 327 aa10.06□□□□□ -0.8
MSH5-212ENST00000467319 FRRS1Q6ZNA5 592 aa10.06□□□□□ -0.8
MSH5-212ENST00000467319 C16orf62Q7Z3J2 963 aa10.06□□□□□ -0.8
MSH5-212ENST00000467319 MARCH3Q86UD3 253 aa10.06□□□□□ -0.8
MSH5-212ENST00000467319 FAM83FQ8NEG4 500 aaPredicted RBP10.06□□□□□ -0.8
MSH5-212ENST00000467319 OR2M3Q8NG83 312 aa10.06□□□□□ -0.8
MSH5-212ENST00000467319 ROPN1LQ96C74 230 aa10.06□□□□□ -0.8
MSH5-212ENST00000467319 JSRP1Q96MG2 331 aaPredicted RBP10.06□□□□□ -0.8
MSH5-212ENST00000467319 TRNT1Q96Q11 434 aaKnown RBP10.06□□□□□ -0.8
MSH5-212ENST00000467319 CPPED1Q9BRF8 314 aaPredicted RBP10.06□□□□□ -0.8
MSH5-212ENST00000467319 TBL1XR1Q9BZK7 514 aa10.06□□□□□ -0.8
MSH5-212ENST00000467319 NSRP1Q9H0G5 558 aaKnown RBP10.06□□□□□ -0.8
MSH5-212ENST00000467319 DEFB127Q9H1M4 99 aa10.06□□□□□ -0.8
MSH5-212ENST00000467319 SLC6A15Q9H2J7 730 aa10.06□□□□□ -0.8
MSH5-212ENST00000467319 IKZF5Q9H5V7 419 aa10.06□□□□□ -0.8
MSH5-212ENST00000467319 RUBCNLQ9H714 662 aa10.06□□□□□ -0.8
MSH5-212ENST00000467319 VAPAQ9P0L0 249 aa10.06□□□□□ -0.8
MSH5-212ENST00000467319 KCNE5Q9UJ90 142 aa10.06□□□□□ -0.8
MSH5-212ENST00000467319 LEF1Q9UJU2 399 aaPredicted RBP10.06□□□□□ -0.8
MSH5-212ENST00000467319 FBXL2Q9UKC9 423 aa10.06□□□□□ -0.8
MSH5-212ENST00000467319 DNAJC13O75165 2243 aa10.05□□□□□ -0.8
MSH5-212ENST00000467319 NPIPA5A0A0B4J1W7 369 aa10.05□□□□□ -0.8
MSH5-212ENST00000467319 A0A1B0GTH9 108 aa10.05□□□□□ -0.8
MSH5-212ENST00000467319 GMNCA6NCL1 334 aa10.05□□□□□ -0.8
MSH5-212ENST00000467319 NPIPA7E9PJI5 369 aa10.05□□□□□ -0.8
MSH5-212ENST00000467319 CLIC1O00299 241 aa10.05□□□□□ -0.8
MSH5-212ENST00000467319 FBP2O00757 339 aa10.05□□□□□ -0.8
MSH5-212ENST00000467319 ANGPT2O15123 496 aa10.05□□□□□ -0.8
MSH5-212ENST00000467319 FCMRO60667 390 aa10.05□□□□□ -0.8
MSH5-212ENST00000467319 SHOX2O60902 331 aaPredicted RBP10.05□□□□□ -0.8
MSH5-212ENST00000467319 TNFRSF21O75509 655 aa10.05□□□□□ -0.8
MSH5-212ENST00000467319 STX11O75558 287 aa10.05□□□□□ -0.8
MSH5-212ENST00000467319 CBR3O75828 277 aa10.05□□□□□ -0.8
MSH5-212ENST00000467319 ANP32DO95626 131 aa10.05□□□□□ -0.8
MSH5-212ENST00000467319 ANGPTL1O95841 491 aa10.05□□□□□ -0.8
MSH5-212ENST00000467319 CHRM4P08173 479 aa10.05□□□□□ -0.8
MSH5-212ENST00000467319 SNRPB2P08579 225 aaKnown RBP10.05□□□□□ -0.8
MSH5-212ENST00000467319 NPIPA8P0DM63 369 aa10.05□□□□□ -0.8
MSH5-212ENST00000467319 ETFAP13804 333 aa10.05□□□□□ -0.8
MSH5-212ENST00000467319 RPS4Y1P22090 263 aaKnown RBP10.05□□□□□ -0.8
MSH5-212ENST00000467319 SRD5A2P31213 254 aa10.05□□□□□ -0.8
MSH5-212ENST00000467319 CA7P43166 264 aa10.05□□□□□ -0.8
MSH5-212ENST00000467319 ATP12AP54707 1039 aa10.05□□□□□ -0.8
MSH5-212ENST00000467319 PLAURQ03405 335 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms