RNA–Protein interactions for RNA: ENST00000467077.1

XRN1-206, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 674 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-206ENST00000467077 TPRP12270 2363 aaKnown RBP2.57□□□□□ -2
XRN1-206ENST00000467077 HMCN1Q96RW7 5635 aa2.57□□□□□ -2
XRN1-206ENST00000467077 IGLV3-22A0A075B6J6 115 aa2.57□□□□□ -2
XRN1-206ENST00000467077 BCLAF3A2AJT9 711 aaKnown RBP2.57□□□□□ -2
XRN1-206ENST00000467077 RPL37AP8A6NKH3 93 aa2.57□□□□□ -2
XRN1-206ENST00000467077 E7EWF7 191 aa2.57□□□□□ -2
XRN1-206ENST00000467077 SPECC1L-ADORA2AF8WAN1 911 aa2.57□□□□□ -2
XRN1-206ENST00000467077 HIP1O00291 1037 aa2.57□□□□□ -2
XRN1-206ENST00000467077 SLC33A1O00400 549 aaPredicted RBP2.57□□□□□ -2
XRN1-206ENST00000467077 CDX4O14627 284 aaPredicted RBP2.57□□□□□ -2
XRN1-206ENST00000467077 PGRMC2O15173 223 aa2.57□□□□□ -2
XRN1-206ENST00000467077 CHADO15335 359 aa2.57□□□□□ -2
XRN1-206ENST00000467077 ACSL4O60488 711 aa2.57□□□□□ -2
XRN1-206ENST00000467077 AKAP3O75969 853 aa2.57□□□□□ -2
XRN1-206ENST00000467077 SLC16A8O95907 504 aa2.57□□□□□ -2
XRN1-206ENST00000467077 CSRP1P21291 193 aaKnown RBP2.57□□□□□ -2
XRN1-206ENST00000467077 SFNP31947 248 aa2.57□□□□□ -2
XRN1-206ENST00000467077 FRKP42685 505 aaPredicted RBP2.57□□□□□ -2
XRN1-206ENST00000467077 DHPSP49366 369 aaPredicted RBP2.57□□□□□ -2
XRN1-206ENST00000467077 ARPP19P56211 112 aa2.57□□□□□ -2
XRN1-206ENST00000467077 ST8SIA6P61647 398 aa2.57□□□□□ -2
XRN1-206ENST00000467077 LAMTOR4Q0VGL1 99 aa2.57□□□□□ -2
XRN1-206ENST00000467077 ZNF79Q15937 498 aa2.57□□□□□ -2
XRN1-206ENST00000467077 KNOP1Q1ED39 458 aaKnown RBP2.57□□□□□ -2
XRN1-206ENST00000467077 LEMD1Q68G75 181 aa2.57□□□□□ -2
XRN1-206ENST00000467077 KLHL10Q6JEL2 608 aa2.57□□□□□ -2
XRN1-206ENST00000467077 IYDQ6PHW0 289 aa2.57□□□□□ -2
XRN1-206ENST00000467077 CASC1Q6TDU7 716 aa2.57□□□□□ -2
XRN1-206ENST00000467077 CCBE1Q6UXH8 406 aaPredicted RBP2.57□□□□□ -2
XRN1-206ENST00000467077 Q71RC1 249 aaPredicted RBP2.57□□□□□ -2
XRN1-206ENST00000467077 RALGPS2Q86X27 583 aaPredicted RBP2.57□□□□□ -2
XRN1-206ENST00000467077 MFSD6LQ8IWD5 586 aa2.57□□□□□ -2
XRN1-206ENST00000467077 GPR65Q8IYL9 337 aa2.57□□□□□ -2
XRN1-206ENST00000467077 ELMOD1Q8N336 334 aa2.57□□□□□ -2
XRN1-206ENST00000467077 HDDC3Q8N4P3 179 aa2.57□□□□□ -2
XRN1-206ENST00000467077 UBLCP1Q8WVY7 318 aaPredicted RBP2.57□□□□□ -2
XRN1-206ENST00000467077 SMARCD2Q92925 531 aa2.57□□□□□ -2
XRN1-206ENST00000467077 TCEAL4Q96EI5 215 aa2.57□□□□□ -2
XRN1-206ENST00000467077 MSANTD3Q96H12 275 aa2.57□□□□□ -2
XRN1-206ENST00000467077 PRMT1Q99873 361 aaKnown RBP2.57□□□□□ -2
XRN1-206ENST00000467077 JPH2Q9BR39 696 aaPredicted RBP2.57□□□□□ -2
XRN1-206ENST00000467077 ATG101Q9BSB4 218 aa2.57□□□□□ -2
XRN1-206ENST00000467077 TEKT3Q9BXF9 490 aa2.57□□□□□ -2
XRN1-206ENST00000467077 NUSAP1Q9BXS6 441 aaKnown RBP2.57□□□□□ -2
XRN1-206ENST00000467077 ZNF350Q9GZX5 532 aa2.57□□□□□ -2
XRN1-206ENST00000467077 DPEP2Q9H4A9 486 aa2.57□□□□□ -2
XRN1-206ENST00000467077 NXF3Q9H4D5 531 aaKnown RBP2.57□□□□□ -2
XRN1-206ENST00000467077 C8orf33Q9H7E9 229 aaPredicted RBP2.57□□□□□ -2
XRN1-206ENST00000467077 KCNK13Q9HB14 408 aa2.57□□□□□ -2
XRN1-206ENST00000467077 ABCB8Q9NUT2 735 aa2.57□□□□□ -2
XRN1-206ENST00000467077 DNAJC17Q9NVM6 304 aaKnown RBP2.57□□□□□ -2
XRN1-206ENST00000467077 CNIH4Q9P003 139 aa2.57□□□□□ -2
XRN1-206ENST00000467077 ABCD2Q9UBJ2 740 aa2.57□□□□□ -2
XRN1-206ENST00000467077 FBXL5Q9UKA1 691 aa2.57□□□□□ -2
XRN1-206ENST00000467077 NCKAP1Q9Y2A7 1128 aa2.57□□□□□ -2
XRN1-206ENST00000467077 PCDHGA1Q9Y5H4 931 aa2.57□□□□□ -2
XRN1-206ENST00000467077 AUP1Q9Y679 476 aa2.57□□□□□ -2
XRN1-206ENST00000467077 MYLKQ15746 1914 aa2.57□□□□□ -2
XRN1-206ENST00000467077 MYH10P35580 1976 aa2.57□□□□□ -2
XRN1-206ENST00000467077 COL5A1P20908 1838 aaPredicted RBP2.56□□□□□ -2
XRN1-206ENST00000467077 MYH11P35749 1972 aa2.56□□□□□ -2
XRN1-206ENST00000467077 PI4KAP42356 2102 aa2.56□□□□□ -2
XRN1-206ENST00000467077 PKD1L2Q7Z442 2459 aa2.56□□□□□ -2
XRN1-206ENST00000467077 A0A1B0GTH9 108 aa2.56□□□□□ -2
XRN1-206ENST00000467077 MYBPHLA2RUH7 354 aa2.56□□□□□ -2
XRN1-206ENST00000467077 I3L4J1 428 aa2.56□□□□□ -2
XRN1-206ENST00000467077 MSH4O15457 936 aa2.56□□□□□ -2
XRN1-206ENST00000467077 B4GALT5O43286 388 aa2.56□□□□□ -2
XRN1-206ENST00000467077 FMO6PO60774 539 aa2.56□□□□□ -2
XRN1-206ENST00000467077 B3GAT3O94766 335 aa2.56□□□□□ -2
XRN1-206ENST00000467077 TRIM16O95361 564 aa2.56□□□□□ -2
XRN1-206ENST00000467077 ANGPTL1O95841 491 aa2.56□□□□□ -2
XRN1-206ENST00000467077 ARF4P18085 180 aaPredicted RBP2.56□□□□□ -2
XRN1-206ENST00000467077 AXLP30530 894 aa2.56□□□□□ -2
XRN1-206ENST00000467077 CCR2P41597 374 aa2.56□□□□□ -2
XRN1-206ENST00000467077 ATXN3P54252 364 aaPredicted RBP2.56□□□□□ -2
XRN1-206ENST00000467077 SNU13P55769 128 aaKnown RBP2.56□□□□□ -2
XRN1-206ENST00000467077 EVCP57679 992 aa2.56□□□□□ -2
XRN1-206ENST00000467077 ASIC1P78348 528 aa2.56□□□□□ -2
XRN1-206ENST00000467077 C17orf67Q0P5P2 114 aa2.56□□□□□ -2
XRN1-206ENST00000467077 CETN1Q12798 172 aa2.56□□□□□ -2
XRN1-206ENST00000467077 ABRQ12979 859 aa2.56□□□□□ -2
XRN1-206ENST00000467077 KARSQ15046 597 aaKnown RBP2.56□□□□□ -2
XRN1-206ENST00000467077 PPA1Q15181 289 aa2.56□□□□□ -2
XRN1-206ENST00000467077 KBTBD12Q3ZCT8 623 aa2.56□□□□□ -2
XRN1-206ENST00000467077 GLRA4Q5JXX5 417 aa2.56□□□□□ -2
XRN1-206ENST00000467077 PM20D1Q6GTS8 502 aa2.56□□□□□ -2
XRN1-206ENST00000467077 EMBQ6PCB8 327 aa2.56□□□□□ -2
XRN1-206ENST00000467077 MIER3Q7Z3K6 550 aa2.56□□□□□ -2
XRN1-206ENST00000467077 CDR2LQ86X02 465 aaPredicted RBP2.56□□□□□ -2
XRN1-206ENST00000467077 AQP12AQ8IXF9 295 aa2.56□□□□□ -2
XRN1-206ENST00000467077 CCDC170Q8IYT3 715 aa2.56□□□□□ -2
XRN1-206ENST00000467077 PRR22Q8IZ63 422 aa2.56□□□□□ -2
XRN1-206ENST00000467077 CLYBLQ8N0X4 340 aa2.56□□□□□ -2
XRN1-206ENST00000467077 NUP93Q8N1F7 819 aa2.56□□□□□ -2
XRN1-206ENST00000467077 RNF149Q8NC42 400 aa2.56□□□□□ -2
XRN1-206ENST00000467077 ZNF461Q8TAF7 563 aa2.56□□□□□ -2
XRN1-206ENST00000467077 SAP25Q8TEE9 199 aa2.56□□□□□ -2
XRN1-206ENST00000467077 AGAP11Q8TF27 550 aa2.56□□□□□ -2
XRN1-206ENST00000467077 CKAP2Q8WWK9 683 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms