RNA–Protein interactions for RNA: ENST00000466192.5

COL9A3-205, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 2,194 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-205ENST00000466192 ARL4DP49703 201 aa16.96■□□□□ 0.31
COL9A3-205ENST00000466192 EMDP50402 254 aa16.96■□□□□ 0.31
COL9A3-205ENST00000466192 EMP3P54852 163 aa16.96■□□□□ 0.31
COL9A3-205ENST00000466192 UBE2UQ5VVX9 321 aa16.96■□□□□ 0.31
COL9A3-205ENST00000466192 SLX4IPQ5VYV7 408 aa16.96■□□□□ 0.31
COL9A3-205ENST00000466192 CASP12Q6UXS9 341 aa16.96■□□□□ 0.31
COL9A3-205ENST00000466192 TTLL10Q6ZVT0 673 aa16.96■□□□□ 0.31
COL9A3-205ENST00000466192 IQCF1Q8N6M8 205 aa16.96■□□□□ 0.31
COL9A3-205ENST00000466192 TBC1D15Q8TC07 691 aa16.96■□□□□ 0.31
COL9A3-205ENST00000466192 SLC38A4Q969I6 547 aa16.96■□□□□ 0.31
COL9A3-205ENST00000466192 RHBDL2Q9NX52 303 aa16.96■□□□□ 0.31
COL9A3-205ENST00000466192 KIAA0513O60268 411 aa16.95■□□□□ 0.3
COL9A3-205ENST00000466192 EPHA8P29322 1005 aaPredicted RBP16.95■□□□□ 0.3
COL9A3-205ENST00000466192 ENTPD1P49961 510 aa16.95■□□□□ 0.3
COL9A3-205ENST00000466192 POU6F2P78424 691 aaPredicted RBP16.95■□□□□ 0.3
COL9A3-205ENST00000466192 PSG6Q00889 435 aa16.95■□□□□ 0.3
COL9A3-205ENST00000466192 DCTN2Q13561 401 aaKnown RBP16.95■□□□□ 0.3
COL9A3-205ENST00000466192 TBCEQ15813 527 aaPredicted RBP16.95■□□□□ 0.3
COL9A3-205ENST00000466192 ENTPD8Q5MY95 495 aa16.95■□□□□ 0.3
COL9A3-205ENST00000466192 PRAMEF17Q5VTA0 474 aa16.95■□□□□ 0.3
COL9A3-205ENST00000466192 PRPF38BQ5VTL8 546 aaKnown RBP16.95■□□□□ 0.3
COL9A3-205ENST00000466192 C1orf94Q6P1W5 598 aa16.95■□□□□ 0.3
COL9A3-205ENST00000466192 ZC3H14Q6PJT7 736 aaKnown RBP16.95■□□□□ 0.3
COL9A3-205ENST00000466192 KANSL1Q7Z3B3 1105 aa16.95■□□□□ 0.3
COL9A3-205ENST00000466192 ZAR1Q86SH2 424 aa16.95■□□□□ 0.3
COL9A3-205ENST00000466192 D2HGDHQ8N465 521 aa16.95■□□□□ 0.3
COL9A3-205ENST00000466192 LINC00471Q8N535 108 aa16.95■□□□□ 0.3
COL9A3-205ENST00000466192 OR1L3Q8NH93 324 aa16.95■□□□□ 0.3
COL9A3-205ENST00000466192 CCDC74AQ96AQ1 378 aa16.95■□□□□ 0.3
COL9A3-205ENST00000466192 DGAT2Q96PD7 388 aa16.95■□□□□ 0.3
COL9A3-205ENST00000466192 CACYBPQ9HB71 228 aaKnown RBP16.95■□□□□ 0.3
COL9A3-205ENST00000466192 FOLH1BQ9HBA9 442 aa16.95■□□□□ 0.3
COL9A3-205ENST00000466192 SEMA5BQ9P283 1151 aa16.95■□□□□ 0.3
COL9A3-205ENST00000466192 ZDBF2Q9HCK1 2354 aa16.95■□□□□ 0.3
COL9A3-205ENST00000466192 SH3D21A4FU49 640 aa16.95■□□□□ 0.3
COL9A3-205ENST00000466192 ENTPD6O75354 484 aa16.95■□□□□ 0.3
COL9A3-205ENST00000466192 FOLR1P15328 257 aa16.95■□□□□ 0.3
COL9A3-205ENST00000466192 HSD17B7P56937 341 aa16.95■□□□□ 0.3
COL9A3-205ENST00000466192 COX10Q12887 443 aa16.95■□□□□ 0.3
COL9A3-205ENST00000466192 FCGR1BQ92637 280 aa16.95■□□□□ 0.3
COL9A3-205ENST00000466192 NUDT22Q9BRQ3 303 aa16.95■□□□□ 0.3
COL9A3-205ENST00000466192 LMF2Q9BU23 707 aaKnown RBP16.95■□□□□ 0.3
COL9A3-205ENST00000466192 ITPAQ9BY32 194 aa16.95■□□□□ 0.3
COL9A3-205ENST00000466192 NECTIN3Q9NQS3 549 aa16.95■□□□□ 0.3
COL9A3-205ENST00000466192 ENAMQ9NRM1 1142 aa16.95■□□□□ 0.3
COL9A3-205ENST00000466192 NLGN3Q9NZ94 848 aa16.95■□□□□ 0.3
COL9A3-205ENST00000466192 NDOR1Q9UHB4 597 aa16.95■□□□□ 0.3
COL9A3-205ENST00000466192 DTX4Q9Y2E6 619 aa16.95■□□□□ 0.3
COL9A3-205ENST00000466192 AP3D1O14617 1153 aa16.94■□□□□ 0.3
COL9A3-205ENST00000466192 ZNF749O43361 778 aa16.94■□□□□ 0.3
COL9A3-205ENST00000466192 BRINP1O60477 761 aa16.94■□□□□ 0.3
COL9A3-205ENST00000466192 KCNK2O95069 426 aa16.94■□□□□ 0.3
COL9A3-205ENST00000466192 AK1P00568 194 aa16.94■□□□□ 0.3
COL9A3-205ENST00000466192 THY1P04216 161 aa16.94■□□□□ 0.3
COL9A3-205ENST00000466192 DBIP07108 87 aaKnown RBP16.94■□□□□ 0.3
COL9A3-205ENST00000466192 CD36P16671 472 aa16.94■□□□□ 0.3
COL9A3-205ENST00000466192 ALAS2P22557 587 aa16.94■□□□□ 0.3
COL9A3-205ENST00000466192 OR1D4P47884 311 aa16.94■□□□□ 0.3
COL9A3-205ENST00000466192 RNF144AP50876 292 aaPredicted RBP16.94■□□□□ 0.3
COL9A3-205ENST00000466192 VBP1P61758 197 aa16.94■□□□□ 0.3
COL9A3-205ENST00000466192 ST3GAL3Q11203 375 aa16.94■□□□□ 0.3
COL9A3-205ENST00000466192 ZNF267Q14586 743 aaPredicted RBP16.94■□□□□ 0.3
COL9A3-205ENST00000466192 TRAM2Q15035 370 aa16.94■□□□□ 0.3
COL9A3-205ENST00000466192 C12orf73Q69YU5 71 aa16.94■□□□□ 0.3
COL9A3-205ENST00000466192 CD300LDQ6UXZ3 194 aa16.94■□□□□ 0.3
COL9A3-205ENST00000466192 ZNF730Q6ZMV8 503 aa16.94■□□□□ 0.3
COL9A3-205ENST00000466192 MAML2Q8IZL2 1156 aaPredicted RBP16.94■□□□□ 0.3
COL9A3-205ENST00000466192 TCEANCQ8N8B7 351 aa16.94■□□□□ 0.3
COL9A3-205ENST00000466192 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.94■□□□□ 0.3
COL9A3-205ENST00000466192 NR4A3Q92570 626 aa16.94■□□□□ 0.3
COL9A3-205ENST00000466192 SLC41A2Q96JW4 573 aa16.94■□□□□ 0.3
COL9A3-205ENST00000466192 MCHR1Q99705 422 aa16.94■□□□□ 0.3
COL9A3-205ENST00000466192 TAS2R16Q9NYV7 291 aa16.94■□□□□ 0.3
COL9A3-205ENST00000466192 DNAJC27Q9NZQ0 273 aa16.94■□□□□ 0.3
COL9A3-205ENST00000466192 DHCR7Q9UBM7 475 aaKnown RBP16.94■□□□□ 0.3
COL9A3-205ENST00000466192 NUP210LQ5VU65 1888 aa16.94■□□□□ 0.3
COL9A3-205ENST00000466192 WDR87Q6ZQQ6 2873 aa16.94■□□□□ 0.3
COL9A3-205ENST00000466192 IFNA8P32881 189 aa16.94■□□□□ 0.3
COL9A3-205ENST00000466192 LIPAP38571 399 aa16.94■□□□□ 0.3
COL9A3-205ENST00000466192 ZNF136P52737 540 aa16.94■□□□□ 0.3
COL9A3-205ENST00000466192 PLK5Q496M5 336 aa16.94■□□□□ 0.3
COL9A3-205ENST00000466192 WDR74Q6RFH5 385 aaPredicted RBP16.94■□□□□ 0.3
COL9A3-205ENST00000466192 PLEKHM3Q6ZWE6 761 aa16.94■□□□□ 0.3
COL9A3-205ENST00000466192 PRICKLE2Q7Z3G6 844 aa16.94■□□□□ 0.3
COL9A3-205ENST00000466192 OR4N2Q8NGD1 307 aa16.94■□□□□ 0.3
COL9A3-205ENST00000466192 VSTM2LQ96N03 204 aa16.94■□□□□ 0.3
COL9A3-205ENST00000466192 LANCL2Q9NS86 450 aa16.94■□□□□ 0.3
COL9A3-205ENST00000466192 TVP23BQ9NYZ1 205 aa16.94■□□□□ 0.3
COL9A3-205ENST00000466192 CNIH4Q9P003 139 aa16.94■□□□□ 0.3
COL9A3-205ENST00000466192 A0A1B0GTQ1 180 aa16.93■□□□□ 0.3
COL9A3-205ENST00000466192 EFCAB10A6NFE3 127 aa16.93■□□□□ 0.3
COL9A3-205ENST00000466192 PTHP01270 115 aa16.93■□□□□ 0.3
COL9A3-205ENST00000466192 ADRA2AP08913 450 aa16.93■□□□□ 0.3
COL9A3-205ENST00000466192 ADORA3P0DMS8 318 aa16.93■□□□□ 0.3
COL9A3-205ENST00000466192 NID1P14543 1247 aa16.93■□□□□ 0.3
COL9A3-205ENST00000466192 TGFBR2P37173 567 aa16.93■□□□□ 0.3
COL9A3-205ENST00000466192 GCGRP47871 477 aa16.93■□□□□ 0.3
COL9A3-205ENST00000466192 SNRPGP62308 76 aaKnown RBP16.93■□□□□ 0.3
COL9A3-205ENST00000466192 ALDH6A1Q02252 535 aaKnown RBP16.93■□□□□ 0.3
COL9A3-205ENST00000466192 TIGD6Q17RP2 521 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms