RNA–Protein interactions for RNA: ENST00000465591.1

LIME1-203, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 680 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-203ENST00000465591 ZCCHC3Q9NUD5 404 aaKnown RBP19.71■□□□□ 0.75
LIME1-203ENST00000465591 CLCF1Q9UBD9 225 aa19.71■□□□□ 0.75
LIME1-203ENST00000465591 ZNF629Q9UEG4 869 aaPredicted RBP19.71■□□□□ 0.75
LIME1-203ENST00000465591 ANGPTL1O95841 491 aa19.7■□□□□ 0.74
LIME1-203ENST00000465591 C6orf47O95873 294 aa19.7■□□□□ 0.74
LIME1-203ENST00000465591 HMGN2P05204 90 aaKnown RBP19.7■□□□□ 0.74
LIME1-203ENST00000465591 HK1P19367 917 aa19.7■□□□□ 0.74
LIME1-203ENST00000465591 RPL3P39023 403 aaKnown RBP19.7■□□□□ 0.74
LIME1-203ENST00000465591 PSMD4P55036 377 aaKnown RBP19.7■□□□□ 0.74
LIME1-203ENST00000465591 DIO3P55073 304 aa19.7■□□□□ 0.74
LIME1-203ENST00000465591 CLDN15P56746 228 aa19.7■□□□□ 0.74
LIME1-203ENST00000465591 PRR5P85299 388 aa19.7■□□□□ 0.74
LIME1-203ENST00000465591 EMX2Q04743 252 aa19.7■□□□□ 0.74
LIME1-203ENST00000465591 LASP1Q14847 261 aaKnown RBP19.7■□□□□ 0.74
LIME1-203ENST00000465591 VPS26BQ4G0F5 336 aa19.7■□□□□ 0.74
LIME1-203ENST00000465591 CCNJQ5T5M9 372 aa19.7■□□□□ 0.74
LIME1-203ENST00000465591 AAGABQ6PD74 315 aa19.7■□□□□ 0.74
LIME1-203ENST00000465591 PSMA8Q8TAA3 256 aa19.7■□□□□ 0.74
LIME1-203ENST00000465591 OR5P2Q8WZ92 322 aa19.7■□□□□ 0.74
LIME1-203ENST00000465591 PGM2Q96G03 612 aa19.7■□□□□ 0.74
LIME1-203ENST00000465591 TBL1XR1Q9BZK7 514 aa19.7■□□□□ 0.74
LIME1-203ENST00000465591 AKTIPQ9H8T0 292 aa19.7■□□□□ 0.74
LIME1-203ENST00000465591 SDHAF3Q9NRP4 125 aa19.7■□□□□ 0.74
LIME1-203ENST00000465591 RAP2CQ9Y3L5 183 aa19.7■□□□□ 0.74
LIME1-203ENST00000465591 ACTL7BQ9Y614 415 aa19.7■□□□□ 0.74
LIME1-203ENST00000465591 AKAP9Q99996 3911 aa19.7■□□□□ 0.74
LIME1-203ENST00000465591 IGLV3-32A0A0A0MS00 114 aa19.69■□□□□ 0.74
LIME1-203ENST00000465591 H0YC42 278 aa19.69■□□□□ 0.74
LIME1-203ENST00000465591 SYT5O00445 386 aa19.69■□□□□ 0.74
LIME1-203ENST00000465591 GMFGO60234 142 aa19.69■□□□□ 0.74
LIME1-203ENST00000465591 ZWINTO95229 277 aa19.69■□□□□ 0.74
LIME1-203ENST00000465591 OXSR1O95747 527 aaPredicted RBP19.69■□□□□ 0.74
LIME1-203ENST00000465591 ALOX5P09917 674 aa19.69■□□□□ 0.74
LIME1-203ENST00000465591 CTSSP25774 331 aa19.69■□□□□ 0.74
LIME1-203ENST00000465591 UQCRC1P31930 480 aa19.69■□□□□ 0.74
LIME1-203ENST00000465591 SLC1A6P48664 564 aa19.69■□□□□ 0.74
LIME1-203ENST00000465591 ASCL1P50553 236 aa19.69■□□□□ 0.74
LIME1-203ENST00000465591 TPD52P55327 224 aaPredicted RBP19.69■□□□□ 0.74
LIME1-203ENST00000465591 ARSKQ6UWY0 536 aa19.69■□□□□ 0.74
LIME1-203ENST00000465591 JADE3Q92613 823 aa19.69■□□□□ 0.74
LIME1-203ENST00000465591 C1GALT1C1Q96EU7 318 aa19.69■□□□□ 0.74
LIME1-203ENST00000465591 UCN2Q96RP3 112 aa19.69■□□□□ 0.74
LIME1-203ENST00000465591 KLHDC3Q9BQ90 382 aa19.69■□□□□ 0.74
LIME1-203ENST00000465591 ASIC5Q9NY37 505 aa19.69■□□□□ 0.74
LIME1-203ENST00000465591 KCNN3Q9UGI6 736 aa19.69■□□□□ 0.74
LIME1-203ENST00000465591 HAO1Q9UJM8 370 aa19.69■□□□□ 0.74
LIME1-203ENST00000465591 EIF3LQ9Y262 564 aaKnown RBP19.69■□□□□ 0.74
LIME1-203ENST00000465591 SNX8Q9Y5X2 465 aa19.69■□□□□ 0.74
LIME1-203ENST00000465591 TEP1Q99973 2627 aaKnown RBP19.69■□□□□ 0.74
LIME1-203ENST00000465591 OR2M5A3KFT3 312 aa19.68■□□□□ 0.74
LIME1-203ENST00000465591 ENO4A6NNW6 628 aa19.68■□□□□ 0.74
LIME1-203ENST00000465591 SHISA8B8ZZ34 492 aa19.68■□□□□ 0.74
LIME1-203ENST00000465591 ALG1L2C9J202 215 aa19.68■□□□□ 0.74
LIME1-203ENST00000465591 TGM6O95932 706 aa19.68■□□□□ 0.74
LIME1-203ENST00000465591 TMIGD3P0DMS9 266 aaPredicted RBP19.68■□□□□ 0.74
LIME1-203ENST00000465591 PRPS1L1P21108 318 aa19.68■□□□□ 0.74
LIME1-203ENST00000465591 DGKQP52824 942 aa19.68■□□□□ 0.74
LIME1-203ENST00000465591 CLDN8P56748 225 aa19.68■□□□□ 0.74
LIME1-203ENST00000465591 WDR4P57081 412 aaKnown RBP19.68■□□□□ 0.74
LIME1-203ENST00000465591 C21orf58P58505 322 aa19.68■□□□□ 0.74
LIME1-203ENST00000465591 MYBPHQ13203 477 aa19.68■□□□□ 0.74
LIME1-203ENST00000465591 CPEB4Q17RY0 729 aaKnown RBP eCLIP19.68■□□□□ 0.74
LIME1-203ENST00000465591 FBXL19-AS1Q494R0 122 aa19.68■□□□□ 0.74
LIME1-203ENST00000465591 RAET1LQ5VY80 246 aa19.68■□□□□ 0.74
LIME1-203ENST00000465591 ZCCHC12Q6PEW1 402 aa19.68■□□□□ 0.74
LIME1-203ENST00000465591 COX18Q8N8Q8 333 aa19.68■□□□□ 0.74
LIME1-203ENST00000465591 GATSQ8NAP1 163 aa19.68■□□□□ 0.74
LIME1-203ENST00000465591 CDS1Q92903 461 aa19.68■□□□□ 0.74
LIME1-203ENST00000465591 ZNF559Q9BR84 538 aa19.68■□□□□ 0.74
LIME1-203ENST00000465591 PNPOQ9NVS9 261 aa19.68■□□□□ 0.74
LIME1-203ENST00000465591 GPATCH2Q9NW75 528 aa19.68■□□□□ 0.74
LIME1-203ENST00000465591 EPB41L3Q9Y2J2 1087 aaPredicted RBP19.68■□□□□ 0.74
LIME1-203ENST00000465591 ZNF337Q9Y3M9 751 aa19.68■□□□□ 0.74
LIME1-203ENST00000465591 KCNE3Q9Y6H6 103 aa19.68■□□□□ 0.74
LIME1-203ENST00000465591 ABCA4P78363 2273 aa19.68■□□□□ 0.74
LIME1-203ENST00000465591 HCRTR2O43614 444 aa19.67■□□□□ 0.74
LIME1-203ENST00000465591 MYZAPP0CAP1 466 aa19.67■□□□□ 0.74
LIME1-203ENST00000465591 DDX5P17844 614 aaKnown RBP19.67■□□□□ 0.74
LIME1-203ENST00000465591 TBXA2RP21731 343 aa19.67■□□□□ 0.74
LIME1-203ENST00000465591 CCT3P49368 545 aaKnown RBP19.67■□□□□ 0.74
LIME1-203ENST00000465591 PRIM2P49643 509 aa19.67■□□□□ 0.74
LIME1-203ENST00000465591 CLK3P49761 638 aaKnown RBP19.67■□□□□ 0.74
LIME1-203ENST00000465591 RPL14P50914 215 aaKnown RBP19.67■□□□□ 0.74
LIME1-203ENST00000465591 SUCLG1P53597 346 aaKnown RBP19.67■□□□□ 0.74
LIME1-203ENST00000465591 C17orf67Q0P5P2 114 aa19.67■□□□□ 0.74
LIME1-203ENST00000465591 BST1Q10588 318 aa19.67■□□□□ 0.74
LIME1-203ENST00000465591 GANABQ14697 944 aaKnown RBP19.67■□□□□ 0.74
LIME1-203ENST00000465591 BCL2A1Q16548 175 aa19.67■□□□□ 0.74
LIME1-203ENST00000465591 UBQLNLQ8IYU4 475 aa19.67■□□□□ 0.74
LIME1-203ENST00000465591 GCNT2Q8N0V5 402 aa19.67■□□□□ 0.74
LIME1-203ENST00000465591 ANKRD42Q8N9B4 389 aa19.67■□□□□ 0.74
LIME1-203ENST00000465591 RNASE6Q93091 150 aaKnown RBP19.67■□□□□ 0.74
LIME1-203ENST00000465591 WNT2BQ93097 391 aa19.67■□□□□ 0.74
LIME1-203ENST00000465591 INTS12Q96CB8 462 aaKnown RBP19.67■□□□□ 0.74
LIME1-203ENST00000465591 DTNBP1Q96EV8 351 aa19.67■□□□□ 0.74
LIME1-203ENST00000465591 NPAS1Q99742 590 aa19.67■□□□□ 0.74
LIME1-203ENST00000465591 DUSP26Q9BV47 211 aa19.67■□□□□ 0.74
LIME1-203ENST00000465591 BHLHE41Q9C0J9 482 aaPredicted RBP19.67■□□□□ 0.74
LIME1-203ENST00000465591 ATAD3AQ9NVI7 634 aa19.67■□□□□ 0.74
LIME1-203ENST00000465591 NOP53Q9NZM5 478 aaKnown RBP19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms